RNA–Protein interactions for RNA: ENST00000555301.1

CHD8-208, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-208ENST00000555301 GIMAP6Q6P9H5 292 aa17.12■□□□□ 0.33
CHD8-208ENST00000555301 SDR42E1Q8WUS8 393 aa17.12■□□□□ 0.33
CHD8-208ENST00000555301 OSBPL5Q9H0X9 879 aaPredicted RBP17.12■□□□□ 0.33
CHD8-208ENST00000555301 SCAF8Q9UPN6 1271 aaKnown RBP17.12■□□□□ 0.33
CHD8-208ENST00000555301 CCDC171Q6TFL3 1326 aa17.12■□□□□ 0.33
CHD8-208ENST00000555301 CNTNAP1P78357 1384 aa17.12■□□□□ 0.33
CHD8-208ENST00000555301 PATL2C9JE40 543 aaKnown RBP17.11■□□□□ 0.33
CHD8-208ENST00000555301 PRKAB2O43741 272 aa17.11■□□□□ 0.33
CHD8-208ENST00000555301 CCDC129Q6ZRS4 1044 aa17.11■□□□□ 0.33
CHD8-208ENST00000555301 ZSCAN29Q8IWY8 852 aaPredicted RBP17.11■□□□□ 0.33
CHD8-208ENST00000555301 HOOK2Q96ED9 719 aa17.11■□□□□ 0.33
CHD8-208ENST00000555301 NACAP1Q9BZK3 213 aa17.11■□□□□ 0.33
CHD8-208ENST00000555301 TMEM39BQ9GZU3 492 aa17.11■□□□□ 0.33
CHD8-208ENST00000555301 DHX36Q9H2U1 1008 aaKnown RBP17.11■□□□□ 0.33
CHD8-208ENST00000555301 DCP1AQ9NPI6 582 aaPredicted RBP17.11■□□□□ 0.33
CHD8-208ENST00000555301 MYO5AQ9Y4I1 1855 aaKnown RBP17.1■□□□□ 0.33
CHD8-208ENST00000555301 SGSM2O43147 1006 aa17.1■□□□□ 0.33
CHD8-208ENST00000555301 ITGBL1O95965 494 aaPredicted RBP17.1■□□□□ 0.33
CHD8-208ENST00000555301 APPP05067 770 aa17.1■□□□□ 0.33
CHD8-208ENST00000555301 SUPT20HL1Q3ZLR7 823 aa17.1■□□□□ 0.33
CHD8-208ENST00000555301 ZNF589Q86UQ0 364 aaPredicted RBP17.1■□□□□ 0.33
CHD8-208ENST00000555301 CDCA5Q96FF9 252 aa17.1■□□□□ 0.33
CHD8-208ENST00000555301 TEPSINQ96N21 525 aa17.1■□□□□ 0.33
CHD8-208ENST00000555301 MKRN1Q9UHC7 482 aaKnown RBP17.1■□□□□ 0.33
CHD8-208ENST00000555301 COL2A1P02458 1487 aaPredicted RBP17.1■□□□□ 0.33
CHD8-208ENST00000555301 GSG1L2A8MUP6 293 aa17.09■□□□□ 0.33
CHD8-208ENST00000555301 NF2P35240 595 aa17.09■□□□□ 0.33
CHD8-208ENST00000555301 ZFPM1Q8IX07 1006 aa17.09■□□□□ 0.33
CHD8-208ENST00000555301 AMOTL1Q8IY63 956 aa17.09■□□□□ 0.33
CHD8-208ENST00000555301 ESYT1Q9BSJ8 1104 aa17.09■□□□□ 0.33
CHD8-208ENST00000555301 MCM9Q9NXL9 1143 aa17.09■□□□□ 0.33
CHD8-208ENST00000555301 ATRNL1Q5VV63 1379 aa17.09■□□□□ 0.33
CHD8-208ENST00000555301 TRAF5O00463 557 aa17.08■□□□□ 0.32
CHD8-208ENST00000555301 HLA-DOAP06340 250 aa17.08■□□□□ 0.32
CHD8-208ENST00000555301 HSPD1P10809 573 aaKnown RBP17.08■□□□□ 0.32
CHD8-208ENST00000555301 TDO2P48775 406 aa17.08■□□□□ 0.32
CHD8-208ENST00000555301 TTC6Q86TZ1 520 aa17.08■□□□□ 0.32
CHD8-208ENST00000555301 IFNL3Q8IZI9 196 aa17.08■□□□□ 0.32
CHD8-208ENST00000555301 CSRNP1Q96S65 589 aa17.08■□□□□ 0.32
CHD8-208ENST00000555301 PI4KBQ9UBF8 816 aa17.08■□□□□ 0.32
CHD8-208ENST00000555301 ARPP21Q9UBL0 812 aaPredicted RBP17.08■□□□□ 0.32
CHD8-208ENST00000555301 PASKQ96RG2 1323 aa17.07■□□□□ 0.32
CHD8-208ENST00000555301 DDTLA6NHG4 134 aaPredicted RBP17.07■□□□□ 0.32
CHD8-208ENST00000555301 POLR3DP05423 398 aaPredicted RBP17.07■□□□□ 0.32
CHD8-208ENST00000555301 NBPF12Q5TAG4 269 aaPredicted RBP17.07■□□□□ 0.32
CHD8-208ENST00000555301 VPS53Q5VIR6 699 aa17.07■□□□□ 0.32
CHD8-208ENST00000555301 PRAMEF18Q5VWM3 479 aa17.07■□□□□ 0.32
CHD8-208ENST00000555301 SH3BP5LQ7L8J4 393 aa17.07■□□□□ 0.32
CHD8-208ENST00000555301 DSCC1Q9BVC3 393 aa17.07■□□□□ 0.32
CHD8-208ENST00000555301 NAPBQ9H115 298 aa17.07■□□□□ 0.32
CHD8-208ENST00000555301 IL25Q9H293 177 aa17.07■□□□□ 0.32
CHD8-208ENST00000555301 SAP30BPQ9UHR5 308 aaKnown RBP17.07■□□□□ 0.32
CHD8-208ENST00000555301 PALD1Q9ULE6 856 aa17.07■□□□□ 0.32
CHD8-208ENST00000555301 MYH7P12883 1935 aa17.07■□□□□ 0.32
CHD8-208ENST00000555301 ECM29Q5VYK3 1845 aa17.06■□□□□ 0.32
CHD8-208ENST00000555301 ALX1Q15699 326 aa17.06■□□□□ 0.32
CHD8-208ENST00000555301 SBK1Q52WX2 424 aa17.06■□□□□ 0.32
CHD8-208ENST00000555301 DCAF15Q66K64 600 aa17.06■□□□□ 0.32
CHD8-208ENST00000555301 DLK2Q6UY11 383 aa17.06■□□□□ 0.32
CHD8-208ENST00000555301 KIAA1211Q6ZU35 1233 aa17.06■□□□□ 0.32
CHD8-208ENST00000555301 EPB41L4AQ9HCS5 686 aaPredicted RBP17.06■□□□□ 0.32
CHD8-208ENST00000555301 TAOK2Q9UL54 1235 aa17.06■□□□□ 0.32
CHD8-208ENST00000555301 ZMYM6O95789 1325 aa17.05■□□□□ 0.32
CHD8-208ENST00000555301 USP17L12C9JPN9 530 aa17.05■□□□□ 0.32
CHD8-208ENST00000555301 USP17L21D6R901 530 aa17.05■□□□□ 0.32
CHD8-208ENST00000555301 FOXP2O15409 715 aa17.05■□□□□ 0.32
CHD8-208ENST00000555301 PPP1R12BO60237 982 aaPredicted RBP17.05■□□□□ 0.32
CHD8-208ENST00000555301 CTR9Q6PD62 1173 aa17.05■□□□□ 0.32
CHD8-208ENST00000555301 FOXP4Q8IVH2 680 aaPredicted RBP17.05■□□□□ 0.32
CHD8-208ENST00000555301 CDAN1Q8IWY9 1227 aa17.05■□□□□ 0.32
CHD8-208ENST00000555301 EHD4Q9H223 541 aa17.05■□□□□ 0.32
CHD8-208ENST00000555301 ZNF408Q9H9D4 720 aa17.05■□□□□ 0.32
CHD8-208ENST00000555301 HERC5Q9UII4 1024 aaKnown RBP17.05■□□□□ 0.32
CHD8-208ENST00000555301 TBC1D12O60347 775 aa17.04■□□□□ 0.32
CHD8-208ENST00000555301 EIF5BO60841 1220 aaKnown RBP17.04■□□□□ 0.32
CHD8-208ENST00000555301 CELF2O95319 508 aaKnown RBP17.04■□□□□ 0.32
CHD8-208ENST00000555301 FKBP1BP68106 108 aa17.04■□□□□ 0.32
CHD8-208ENST00000555301 C12orf60Q5U649 245 aa17.04■□□□□ 0.32
CHD8-208ENST00000555301 TRIM34Q9BYJ4 488 aa17.04■□□□□ 0.32
CHD8-208ENST00000555301 CTNNA3Q9UI47 895 aa17.04■□□□□ 0.32
CHD8-208ENST00000555301 FGAP02671 866 aa17.03■□□□□ 0.32
CHD8-208ENST00000555301 PLCD1P51178 756 aa17.03■□□□□ 0.32
CHD8-208ENST00000555301 MAP3K10Q02779 954 aa17.03■□□□□ 0.32
CHD8-208ENST00000555301 FMR1Q06787 632 aaKnown RBP eCLIP17.03■□□□□ 0.323e-8■■■■■ 30.6
CHD8-208ENST00000555301 METTL16Q86W50 562 aaKnown RBP17.03■□□□□ 0.32
CHD8-208ENST00000555301 CRACR2BQ8N4Y2 399 aaPredicted RBP17.03■□□□□ 0.32
CHD8-208ENST00000555301 ZNF341Q9BYN7 854 aa17.03■□□□□ 0.32
CHD8-208ENST00000555301 ANO2Q9NQ90 1003 aa17.03■□□□□ 0.32
CHD8-208ENST00000555301 SERPINB13Q9UIV8 391 aa17.03■□□□□ 0.32
CHD8-208ENST00000555301 AK9Q5TCS8 1911 aa17.02■□□□□ 0.32
CHD8-208ENST00000555301 MINDY4BA8MYZ0 360 aa17.02■□□□□ 0.32
CHD8-208ENST00000555301 REC8O95072 547 aa17.02■□□□□ 0.32
CHD8-208ENST00000555301 TTLL12Q14166 644 aaPredicted RBP17.02■□□□□ 0.32
CHD8-208ENST00000555301 SLC4A8Q2Y0W8 1093 aa17.02■□□□□ 0.32
CHD8-208ENST00000555301 MIGA2Q7L4E1 593 aa17.02■□□□□ 0.32
CHD8-208ENST00000555301 ARMC9Q7Z3E5 817 aa17.02■□□□□ 0.32
CHD8-208ENST00000555301 C2orf69Q8N8R5 385 aa17.02■□□□□ 0.32
CHD8-208ENST00000555301 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.02■□□□□ 0.32
CHD8-208ENST00000555301 GBA2Q9HCG7 927 aaPredicted RBP17.02■□□□□ 0.32
CHD8-208ENST00000555301 SLC3A2P08195 630 aaKnown RBP17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms