RNA–Protein interactions for RNA: ENST00000555170.1

TRIM9-204, Transcript of tripartite motif containing 9, humanhuman

TSL 4

Gene TRIM9, Length 554 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM9-204ENST00000555170 RFX7Q2KHR2 1363 aa10.29□□□□□ -0.76
TRIM9-204ENST00000555170 ZAP70P43403 619 aa10.29□□□□□ -0.76
TRIM9-204ENST00000555170 HDLBPQ00341 1268 aaKnown RBP10.29□□□□□ -0.76
TRIM9-204ENST00000555170 CCDC158Q5M9N0 1113 aa10.29□□□□□ -0.76
TRIM9-204ENST00000555170 APOBEC3HQ6NTF7 200 aaKnown RBP10.29□□□□□ -0.76
TRIM9-204ENST00000555170 CLASRPQ8N2M8 674 aaKnown RBP10.29□□□□□ -0.76
TRIM9-204ENST00000555170 ZNF512BQ96KM6 892 aaPredicted RBP10.29□□□□□ -0.76
TRIM9-204ENST00000555170 DCTPP1Q9H773 170 aa10.29□□□□□ -0.76
TRIM9-204ENST00000555170 ANGEL1Q9UNK9 670 aaKnown RBP10.29□□□□□ -0.76
TRIM9-204ENST00000555170 GAKO14976 1311 aa10.29□□□□□ -0.76
TRIM9-204ENST00000555170 LAMB1P07942 1786 aa10.29□□□□□ -0.76
TRIM9-204ENST00000555170 MYO1BO43795 1136 aa10.28□□□□□ -0.76
TRIM9-204ENST00000555170 CYP2E1P05181 493 aaPredicted RBP10.28□□□□□ -0.76
TRIM9-204ENST00000555170 MECOMQ03112 1051 aa10.28□□□□□ -0.76
TRIM9-204ENST00000555170 HHIPL2Q6UWX4 724 aa10.28□□□□□ -0.76
TRIM9-204ENST00000555170 DZIP1Q86YF9 867 aaKnown RBP10.28□□□□□ -0.76
TRIM9-204ENST00000555170 ZGPATQ8N5A5 531 aaKnown RBP10.28□□□□□ -0.76
TRIM9-204ENST00000555170 SH3TC2Q8TF17 1288 aa10.28□□□□□ -0.76
TRIM9-204ENST00000555170 CLMNQ96JQ2 1002 aa10.28□□□□□ -0.76
TRIM9-204ENST00000555170 PTPN18Q99952 460 aa10.28□□□□□ -0.76
TRIM9-204ENST00000555170 MRIQ9BWK5 157 aa10.28□□□□□ -0.76
TRIM9-204ENST00000555170 LRRCC1Q9C099 1032 aa10.28□□□□□ -0.76
TRIM9-204ENST00000555170 ANTXR1Q9H6X2 564 aa10.28□□□□□ -0.76
TRIM9-204ENST00000555170 PIH1D3Q9NQM4 214 aaKnown RBP10.28□□□□□ -0.76
TRIM9-204ENST00000555170 SIPA1L1O43166 1804 aa10.28□□□□□ -0.76
TRIM9-204ENST00000555170 DDX60LQ5H9U9 1706 aaKnown RBP10.27□□□□□ -0.76
TRIM9-204ENST00000555170 TCP10L2B9ZVM9 353 aa10.27□□□□□ -0.77
TRIM9-204ENST00000555170 IFIT2P09913 472 aaKnown RBP10.27□□□□□ -0.77
TRIM9-204ENST00000555170 ERICH6Q7L0X2 663 aa10.27□□□□□ -0.77
TRIM9-204ENST00000555170 NSUN4Q96CB9 384 aaKnown RBP10.27□□□□□ -0.77
TRIM9-204ENST00000555170 WNK4Q96J92 1243 aa10.27□□□□□ -0.77
TRIM9-204ENST00000555170 DEFB129Q9H1M3 183 aa10.27□□□□□ -0.77
TRIM9-204ENST00000555170 MROH7-TTC4A0A0A0MT08 1334 aa10.27□□□□□ -0.77
TRIM9-204ENST00000555170 AK9Q5TCS8 1911 aa10.27□□□□□ -0.77
TRIM9-204ENST00000555170 ZBTB48P10074 688 aaPredicted RBP10.26□□□□□ -0.77
TRIM9-204ENST00000555170 BTDP43251 543 aa10.26□□□□□ -0.77
TRIM9-204ENST00000555170 NFIAQ12857 509 aa10.26□□□□□ -0.77
TRIM9-204ENST00000555170 HDAC1Q13547 482 aaPredicted RBP10.26□□□□□ -0.77
TRIM9-204ENST00000555170 RASA3Q14644 834 aa10.26□□□□□ -0.77
TRIM9-204ENST00000555170 NBPF12Q5TAG4 269 aaPredicted RBP10.26□□□□□ -0.77
TRIM9-204ENST00000555170 CDC42EP5Q6NZY7 148 aa10.26□□□□□ -0.77
TRIM9-204ENST00000555170 ADGRA1Q86SQ6 560 aa10.26□□□□□ -0.77
TRIM9-204ENST00000555170 SHISA4Q96DD7 197 aa10.26□□□□□ -0.77
TRIM9-204ENST00000555170 EDC3Q96F86 508 aaKnown RBP10.26□□□□□ -0.77
TRIM9-204ENST00000555170 TEPSINQ96N21 525 aa10.26□□□□□ -0.77
TRIM9-204ENST00000555170 TMEM39BQ9GZU3 492 aa10.26□□□□□ -0.77
TRIM9-204ENST00000555170 RAI14Q9P0K7 980 aa10.26□□□□□ -0.77
TRIM9-204ENST00000555170 PPP2R3BQ9Y5P8 575 aa10.26□□□□□ -0.77
TRIM9-204ENST00000555170 RPAP1Q9BWH6 1393 aaPredicted RBP10.26□□□□□ -0.77
TRIM9-204ENST00000555170 NAV1Q8NEY1 1877 aa10.25□□□□□ -0.77
TRIM9-204ENST00000555170 TSHZ3Q63HK5 1081 aa10.25□□□□□ -0.77
TRIM9-204ENST00000555170 SPTY2D1Q68D10 685 aaPredicted RBP10.25□□□□□ -0.77
TRIM9-204ENST00000555170 OTUD7BQ6GQQ9 843 aa10.25□□□□□ -0.77
TRIM9-204ENST00000555170 OTUD7AQ8TE49 926 aaPredicted RBP10.25□□□□□ -0.77
TRIM9-204ENST00000555170 LRP2BPQ9P2M1 347 aa10.25□□□□□ -0.77
TRIM9-204ENST00000555170 VCANP13611 3396 aa10.25□□□□□ -0.77
TRIM9-204ENST00000555170 GPR75-ASB3A0A0A6YYF3 556 aa10.24□□□□□ -0.77
TRIM9-204ENST00000555170 A0A1W2PPC1 479 aa10.24□□□□□ -0.77
TRIM9-204ENST00000555170 IGHDP01880 384 aa10.24□□□□□ -0.77
TRIM9-204ENST00000555170 GJA5P36382 358 aa10.24□□□□□ -0.77
TRIM9-204ENST00000555170 RHBDL3P58872 404 aa10.24□□□□□ -0.77
TRIM9-204ENST00000555170 AAMPQ13685 434 aa10.24□□□□□ -0.77
TRIM9-204ENST00000555170 TNFAIP1Q13829 316 aa10.24□□□□□ -0.77
TRIM9-204ENST00000555170 MTFR1Q15390 333 aa10.24□□□□□ -0.77
TRIM9-204ENST00000555170 Q7L0L9 218 aa10.24□□□□□ -0.77
TRIM9-204ENST00000555170 DEFB123Q8N688 67 aa10.24□□□□□ -0.77
TRIM9-204ENST00000555170 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.24□□□□□ -0.77
TRIM9-204ENST00000555170 FAM163AQ96GL9 167 aaPredicted RBP10.24□□□□□ -0.77
TRIM9-204ENST00000555170 DNAJC2Q99543 621 aaKnown RBP10.24□□□□□ -0.77
TRIM9-204ENST00000555170 BOLA2Q9H3K6 86 aa10.24□□□□□ -0.77
TRIM9-204ENST00000555170 DDX4Q9NQI0 724 aaKnown RBP10.24□□□□□ -0.77
TRIM9-204ENST00000555170 USP40Q9NVE5 1235 aa10.24□□□□□ -0.77
TRIM9-204ENST00000555170 FAM198AQ9UFP1 575 aa10.24□□□□□ -0.77
TRIM9-204ENST00000555170 STAP2Q9UGK3 403 aa10.24□□□□□ -0.77
TRIM9-204ENST00000555170 NR2E3Q9Y5X4 410 aa10.24□□□□□ -0.77
TRIM9-204ENST00000555170 SALL3Q9BXA9 1300 aa10.24□□□□□ -0.77
TRIM9-204ENST00000555170 MYH1P12882 1939 aa10.23□□□□□ -0.77
TRIM9-204ENST00000555170 TESPA1A2RU30 521 aaPredicted RBP10.23□□□□□ -0.77
TRIM9-204ENST00000555170 GOLIM4O00461 696 aa10.23□□□□□ -0.77
TRIM9-204ENST00000555170 WDHD1O75717 1129 aaPredicted RBP10.23□□□□□ -0.77
TRIM9-204ENST00000555170 IDH1O75874 414 aaKnown RBP10.23□□□□□ -0.77
TRIM9-204ENST00000555170 ATP5JP18859 108 aa10.23□□□□□ -0.77
TRIM9-204ENST00000555170 TNNI2P48788 182 aa10.23□□□□□ -0.77
TRIM9-204ENST00000555170 TCP10Q12799 353 aa10.23□□□□□ -0.77
TRIM9-204ENST00000555170 ARHGEF6Q15052 776 aa10.23□□□□□ -0.77
TRIM9-204ENST00000555170 MAP3K11Q16584 847 aa10.23□□□□□ -0.77
TRIM9-204ENST00000555170 FKBP1CQ5VVH2 108 aa10.23□□□□□ -0.77
TRIM9-204ENST00000555170 NAA16Q6N069 864 aaPredicted RBP10.23□□□□□ -0.77
TRIM9-204ENST00000555170 UBE2Q1Q7Z7E8 422 aa10.23□□□□□ -0.77
TRIM9-204ENST00000555170 FAM83AQ86UY5 434 aa10.23□□□□□ -0.77
TRIM9-204ENST00000555170 ZFPM1Q8IX07 1006 aa10.23□□□□□ -0.77
TRIM9-204ENST00000555170 ARHGAP39Q9C0H5 1083 aa10.23□□□□□ -0.77
TRIM9-204ENST00000555170 TMOD2Q9NZR1 351 aa10.23□□□□□ -0.77
TRIM9-204ENST00000555170 STXBP5LQ9Y2K9 1186 aa10.23□□□□□ -0.77
TRIM9-204ENST00000555170 ATAD5Q96QE3 1844 aa10.23□□□□□ -0.77
TRIM9-204ENST00000555170 ATRNL1Q5VV63 1379 aa10.23□□□□□ -0.77
TRIM9-204ENST00000555170 DOCK1Q14185 1865 aa10.23□□□□□ -0.77
TRIM9-204ENST00000555170 CHGBP05060 677 aa10.22□□□□□ -0.77
TRIM9-204ENST00000555170 RGS3P49796 1198 aa10.22□□□□□ -0.77
TRIM9-204ENST00000555170 GSTO1P78417 241 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms