RNA–Protein interactions for RNA: ENST00000555046.1

TMEM260-206, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-206ENST00000555046 BTDP43251 543 aa12.82□□□□□ -0.36
TMEM260-206ENST00000555046 MNX1P50219 401 aaPredicted RBP12.82□□□□□ -0.36
TMEM260-206ENST00000555046 ARMC9Q7Z3E5 817 aa12.82□□□□□ -0.36
TMEM260-206ENST00000555046 CDCA5Q96FF9 252 aa12.82□□□□□ -0.36
TMEM260-206ENST00000555046 HHIPL1Q96JK4 782 aa12.82□□□□□ -0.36
TMEM260-206ENST00000555046 IDI2Q9BXS1 227 aa12.82□□□□□ -0.36
TMEM260-206ENST00000555046 GBA2Q9HCG7 927 aaPredicted RBP12.82□□□□□ -0.36
TMEM260-206ENST00000555046 PIH1D3Q9NQM4 214 aaKnown RBP12.82□□□□□ -0.36
TMEM260-206ENST00000555046 STAP2Q9UGK3 403 aa12.82□□□□□ -0.36
TMEM260-206ENST00000555046 ASTN2O75129 1339 aaPredicted RBP12.82□□□□□ -0.36
TMEM260-206ENST00000555046 PAPPA2Q9BXP8 1791 aa12.81□□□□□ -0.36
TMEM260-206ENST00000555046 ADM5C9JUS6 153 aa12.81□□□□□ -0.36
TMEM260-206ENST00000555046 ENTPD3O75355 529 aa12.81□□□□□ -0.36
TMEM260-206ENST00000555046 ZFYP08048 801 aaPredicted RBP12.81□□□□□ -0.36
TMEM260-206ENST00000555046 MAGEB6Q8N7X4 407 aa12.81□□□□□ -0.36
TMEM260-206ENST00000555046 FAM151AQ8WW52 585 aa12.81□□□□□ -0.36
TMEM260-206ENST00000555046 LNPKQ9C0E8 428 aa12.81□□□□□ -0.36
TMEM260-206ENST00000555046 SAGE1Q9NXZ1 904 aa12.81□□□□□ -0.36
TMEM260-206ENST00000555046 PCDHAC2Q9Y5I4 1007 aa12.81□□□□□ -0.36
TMEM260-206ENST00000555046 COL1A1P02452 1464 aaPredicted RBP12.8□□□□□ -0.36
TMEM260-206ENST00000555046 PDE1AP54750 535 aa12.8□□□□□ -0.36
TMEM260-206ENST00000555046 TTLL12Q14166 644 aaPredicted RBP12.8□□□□□ -0.36
TMEM260-206ENST00000555046 UBE3CQ15386 1083 aa12.8□□□□□ -0.36
TMEM260-206ENST00000555046 ANTXR1Q9H6X2 564 aa12.8□□□□□ -0.36
TMEM260-206ENST00000555046 AOX1Q06278 1338 aa12.8□□□□□ -0.36
TMEM260-206ENST00000555046 IREB2P48200 963 aaKnown RBP12.79□□□□□ -0.36
TMEM260-206ENST00000555046 NOGQ13253 232 aa12.79□□□□□ -0.36
TMEM260-206ENST00000555046 DCAF15Q66K64 600 aa12.79□□□□□ -0.36
TMEM260-206ENST00000555046 CENPQQ7L2Z9 268 aaPredicted RBP12.79□□□□□ -0.36
TMEM260-206ENST00000555046 KBTBD3Q8NAB2 608 aa12.79□□□□□ -0.36
TMEM260-206ENST00000555046 CCDC102AQ96A19 550 aa12.79□□□□□ -0.36
TMEM260-206ENST00000555046 EVI5LQ96CN4 794 aa12.79□□□□□ -0.36
TMEM260-206ENST00000555046 CCDC136Q96JN2 1154 aa12.79□□□□□ -0.36
TMEM260-206ENST00000555046 DHX36Q9H2U1 1008 aaKnown RBP12.79□□□□□ -0.36
TMEM260-206ENST00000555046 OSBPL3Q9H4L5 887 aa12.79□□□□□ -0.36
TMEM260-206ENST00000555046 AATFQ9NY61 560 aaKnown RBP eCLIP12.79□□□□□ -0.36
TMEM260-206ENST00000555046 MAGEB6P1A0A0J9YX57 407 aa12.78□□□□□ -0.36
TMEM260-206ENST00000555046 PDE6AP16499 860 aa12.78□□□□□ -0.36
TMEM260-206ENST00000555046 PRAMEF18Q5VWM3 479 aa12.78□□□□□ -0.36
TMEM260-206ENST00000555046 ZSCAN29Q8IWY8 852 aaPredicted RBP12.78□□□□□ -0.36
TMEM260-206ENST00000555046 TEX11Q8IYF3 940 aa12.78□□□□□ -0.36
TMEM260-206ENST00000555046 DDRGK1Q96HY6 314 aa12.78□□□□□ -0.36
TMEM260-206ENST00000555046 NDUFB9Q9Y6M9 179 aa12.78□□□□□ -0.36
TMEM260-206ENST00000555046 ADD2P35612 726 aa12.77□□□□□ -0.37
TMEM260-206ENST00000555046 RGS3P49796 1198 aa12.77□□□□□ -0.37
TMEM260-206ENST00000555046 CACNB3P54284 484 aa12.77□□□□□ -0.37
TMEM260-206ENST00000555046 HUNKP57058 714 aa12.77□□□□□ -0.37
TMEM260-206ENST00000555046 RHBDL3P58872 404 aa12.77□□□□□ -0.37
TMEM260-206ENST00000555046 TCP10Q12799 353 aa12.77□□□□□ -0.37
TMEM260-206ENST00000555046 PI4K2BQ8TCG2 481 aa12.77□□□□□ -0.37
TMEM260-206ENST00000555046 ZNF384Q8TF68 577 aa12.77□□□□□ -0.37
TMEM260-206ENST00000555046 CRNKL1Q9BZJ0 848 aaKnown RBP12.77□□□□□ -0.37
TMEM260-206ENST00000555046 TMEM39BQ9GZU3 492 aa12.77□□□□□ -0.37
TMEM260-206ENST00000555046 ZNF532Q9HCE3 1301 aa12.77□□□□□ -0.37
TMEM260-206ENST00000555046 SPTBN5Q9NRC6 3674 aaKnown RBP12.77□□□□□ -0.37
TMEM260-206ENST00000555046 RNF113AO15541 343 aaKnown RBP12.76□□□□□ -0.37
TMEM260-206ENST00000555046 WDHD1O75717 1129 aaPredicted RBP12.76□□□□□ -0.37
TMEM260-206ENST00000555046 USP5P45974 858 aa12.76□□□□□ -0.37
TMEM260-206ENST00000555046 MAP3K11Q16584 847 aa12.76□□□□□ -0.37
TMEM260-206ENST00000555046 NBPF12Q5TAG4 269 aaPredicted RBP12.76□□□□□ -0.37
TMEM260-206ENST00000555046 PLEKHM2Q8IWE5 1019 aa12.76□□□□□ -0.37
TMEM260-206ENST00000555046 OTUD7AQ8TE49 926 aaPredicted RBP12.76□□□□□ -0.37
TMEM260-206ENST00000555046 SLC10A4Q96EP9 437 aa12.76□□□□□ -0.37
TMEM260-206ENST00000555046 FSD1Q9BTV5 496 aa12.76□□□□□ -0.37
TMEM260-206ENST00000555046 PI4KBQ9UBF8 816 aa12.76□□□□□ -0.37
TMEM260-206ENST00000555046 FAM198AQ9UFP1 575 aa12.76□□□□□ -0.37
TMEM260-206ENST00000555046 ANGEL1Q9UNK9 670 aaKnown RBP12.76□□□□□ -0.37
TMEM260-206ENST00000555046 SCAF8Q9UPN6 1271 aaKnown RBP12.76□□□□□ -0.37
TMEM260-206ENST00000555046 A0A1B0GUL6 1792 aa12.76□□□□□ -0.37
TMEM260-206ENST00000555046 TRIM6-TRIM34B2RNG4 842 aa12.75□□□□□ -0.37
TMEM260-206ENST00000555046 GNAT2P19087 354 aa12.75□□□□□ -0.37
TMEM260-206ENST00000555046 ZNF157P51786 506 aaPredicted RBP12.75□□□□□ -0.37
TMEM260-206ENST00000555046 NFIAQ12857 509 aa12.75□□□□□ -0.37
TMEM260-206ENST00000555046 PICALMQ13492 652 aa12.75□□□□□ -0.37
TMEM260-206ENST00000555046 PSME4Q14997 1843 aa12.75□□□□□ -0.37
TMEM260-206ENST00000555046 TSHZ3Q63HK5 1081 aa12.75□□□□□ -0.37
TMEM260-206ENST00000555046 RGMBQ6NW40 437 aa12.75□□□□□ -0.37
TMEM260-206ENST00000555046 DLK2Q6UY11 383 aa12.75□□□□□ -0.37
TMEM260-206ENST00000555046 FOXP4Q8IVH2 680 aaPredicted RBP12.75□□□□□ -0.37
TMEM260-206ENST00000555046 REM2Q8IYK8 340 aaPredicted RBP12.75□□□□□ -0.37
TMEM260-206ENST00000555046 ANKRD13AQ8IZ07 590 aa12.75□□□□□ -0.37
TMEM260-206ENST00000555046 MIGA1Q8NAN2 632 aa12.75□□□□□ -0.37
TMEM260-206ENST00000555046 SH3RF3Q8TEJ3 882 aaPredicted RBP12.75□□□□□ -0.37
TMEM260-206ENST00000555046 TGFBRAP1Q8WUH2 860 aa12.75□□□□□ -0.37
TMEM260-206ENST00000555046 EDC3Q96F86 508 aaKnown RBP12.75□□□□□ -0.37
TMEM260-206ENST00000555046 TEPSINQ96N21 525 aa12.75□□□□□ -0.37
TMEM260-206ENST00000555046 SALL3Q9BXA9 1300 aa12.75□□□□□ -0.37
TMEM260-206ENST00000555046 RNF186Q9NXI6 227 aa12.75□□□□□ -0.37
TMEM260-206ENST00000555046 PPP4R2Q9NY27 417 aa12.75□□□□□ -0.37
TMEM260-206ENST00000555046 TAOK2Q9UL54 1235 aa12.75□□□□□ -0.37
TMEM260-206ENST00000555046 RPAP1Q9BWH6 1393 aaPredicted RBP12.74□□□□□ -0.37
TMEM260-206ENST00000555046 TCRBV5S4A2TA0A5A2 114 aa12.74□□□□□ -0.37
TMEM260-206ENST00000555046 HIP1O00291 1037 aa12.74□□□□□ -0.37
TMEM260-206ENST00000555046 TBC1D12O60347 775 aa12.74□□□□□ -0.37
TMEM260-206ENST00000555046 USP2O75604 605 aaPredicted RBP12.74□□□□□ -0.37
TMEM260-206ENST00000555046 TRPA1O75762 1119 aa12.74□□□□□ -0.37
TMEM260-206ENST00000555046 HLA-DOAP06340 250 aa12.74□□□□□ -0.37
TMEM260-206ENST00000555046 MAP3K9P80192 1104 aa12.74□□□□□ -0.37
TMEM260-206ENST00000555046 PKN2Q16513 984 aaKnown RBP12.74□□□□□ -0.37
TMEM260-206ENST00000555046 LDLRAD1Q5T700 205 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms