RNA–Protein interactions for RNA: ENST00000554997.1

SYNE2-215, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 711 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-215ENST00000554997 DEFB129Q9H1M3 183 aa12.2□□□□□ -0.46
SYNE2-215ENST00000554997 VEZTQ9HBM0 779 aa12.2□□□□□ -0.46
SYNE2-215ENST00000554997 DCP1AQ9NPI6 582 aaPredicted RBP12.2□□□□□ -0.46
SYNE2-215ENST00000554997 DDX4Q9NQI0 724 aaKnown RBP12.2□□□□□ -0.46
SYNE2-215ENST00000554997 FOXP2O15409 715 aa12.19□□□□□ -0.46
SYNE2-215ENST00000554997 EPB41L2O43491 1005 aaKnown RBP12.19□□□□□ -0.46
SYNE2-215ENST00000554997 REC8O95072 547 aa12.19□□□□□ -0.46
SYNE2-215ENST00000554997 FGAP02671 866 aa12.19□□□□□ -0.46
SYNE2-215ENST00000554997 PICALMQ13492 652 aa12.19□□□□□ -0.46
SYNE2-215ENST00000554997 RASA3Q14644 834 aa12.19□□□□□ -0.46
SYNE2-215ENST00000554997 SBK1Q52WX2 424 aa12.19□□□□□ -0.46
SYNE2-215ENST00000554997 CDC37L1Q7L3B6 337 aa12.19□□□□□ -0.46
SYNE2-215ENST00000554997 LDHDQ86WU2 507 aa12.19□□□□□ -0.46
SYNE2-215ENST00000554997 MAPKAPK5Q8IW41 473 aa12.19□□□□□ -0.46
SYNE2-215ENST00000554997 ZFPM1Q8IX07 1006 aa12.19□□□□□ -0.46
SYNE2-215ENST00000554997 LSG1Q9H089 658 aaKnown RBP12.19□□□□□ -0.46
SYNE2-215ENST00000554997 OSBPL5Q9H0X9 879 aaPredicted RBP12.19□□□□□ -0.46
SYNE2-215ENST00000554997 DHX36Q9H2U1 1008 aaKnown RBP12.19□□□□□ -0.46
SYNE2-215ENST00000554997 GGA3Q9NZ52 723 aa12.19□□□□□ -0.46
SYNE2-215ENST00000554997 CTNNA3Q9UI47 895 aa12.19□□□□□ -0.46
SYNE2-215ENST00000554997 PPP2R3BQ9Y5P8 575 aa12.19□□□□□ -0.46
SYNE2-215ENST00000554997 SCN4AP35499 1836 aa12.18□□□□□ -0.46
SYNE2-215ENST00000554997 FLT1P17948 1338 aa12.18□□□□□ -0.46
SYNE2-215ENST00000554997 USP17L12C9JPN9 530 aa12.18□□□□□ -0.46
SYNE2-215ENST00000554997 USP17L21D6R901 530 aa12.18□□□□□ -0.46
SYNE2-215ENST00000554997 POTEIP0CG38 1075 aa12.18□□□□□ -0.46
SYNE2-215ENST00000554997 POTEJP0CG39 1038 aa12.18□□□□□ -0.46
SYNE2-215ENST00000554997 PTH1RQ03431 593 aa12.18□□□□□ -0.46
SYNE2-215ENST00000554997 TCP10Q12799 353 aa12.18□□□□□ -0.46
SYNE2-215ENST00000554997 CTR9Q6PD62 1173 aa12.18□□□□□ -0.46
SYNE2-215ENST00000554997 TTC6Q86TZ1 520 aa12.18□□□□□ -0.46
SYNE2-215ENST00000554997 SULF1Q8IWU6 871 aa12.18□□□□□ -0.46
SYNE2-215ENST00000554997 ANO2Q9NQ90 1003 aa12.18□□□□□ -0.46
SYNE2-215ENST00000554997 MCM9Q9NXL9 1143 aa12.18□□□□□ -0.46
SYNE2-215ENST00000554997 MYO5AQ9Y4I1 1855 aaKnown RBP12.18□□□□□ -0.46
SYNE2-215ENST00000554997 CNTNAP1P78357 1384 aa12.18□□□□□ -0.46
SYNE2-215ENST00000554997 KIF3CO14782 793 aa12.17□□□□□ -0.46
SYNE2-215ENST00000554997 SEC24BO95487 1268 aa12.17□□□□□ -0.46
SYNE2-215ENST00000554997 KCNA4P22459 653 aa12.17□□□□□ -0.46
SYNE2-215ENST00000554997 TDO2P48775 406 aa12.17□□□□□ -0.46
SYNE2-215ENST00000554997 SH3BP5LQ7L8J4 393 aa12.17□□□□□ -0.46
SYNE2-215ENST00000554997 KRT26Q7Z3Y9 468 aa12.17□□□□□ -0.46
SYNE2-215ENST00000554997 USP48Q86UV5 1035 aa12.17□□□□□ -0.46
SYNE2-215ENST00000554997 FOXP4Q8IVH2 680 aaPredicted RBP12.17□□□□□ -0.46
SYNE2-215ENST00000554997 TEPSINQ96N21 525 aa12.17□□□□□ -0.46
SYNE2-215ENST00000554997 USP26Q9BXU7 913 aa12.17□□□□□ -0.46
SYNE2-215ENST00000554997 TMEM39BQ9GZU3 492 aa12.17□□□□□ -0.46
SYNE2-215ENST00000554997 NAPBQ9H115 298 aa12.17□□□□□ -0.46
SYNE2-215ENST00000554997 EPB41L4AQ9HCS5 686 aaPredicted RBP12.17□□□□□ -0.46
SYNE2-215ENST00000554997 PI4KBQ9UBF8 816 aa12.17□□□□□ -0.46
SYNE2-215ENST00000554997 PALD1Q9ULE6 856 aa12.17□□□□□ -0.46
SYNE2-215ENST00000554997 U3KPZ7 1027 aaPredicted RBP12.17□□□□□ -0.46
SYNE2-215ENST00000554997 MYH2Q9UKX2 1941 aa12.17□□□□□ -0.46
SYNE2-215ENST00000554997 ZMYM6O95789 1325 aa12.16□□□□□ -0.46
SYNE2-215ENST00000554997 MAST2Q6P0Q8 1798 aa12.16□□□□□ -0.46
SYNE2-215ENST00000554997 DDTLA6NHG4 134 aaPredicted RBP12.16□□□□□ -0.46
SYNE2-215ENST00000554997 POLR3DP05423 398 aaPredicted RBP12.16□□□□□ -0.46
SYNE2-215ENST00000554997 PLCD1P51178 756 aa12.16□□□□□ -0.46
SYNE2-215ENST00000554997 MAP3K10Q02779 954 aa12.16□□□□□ -0.46
SYNE2-215ENST00000554997 NECTIN1Q15223 517 aa12.16□□□□□ -0.46
SYNE2-215ENST00000554997 SUPT20HL1Q3ZLR7 823 aa12.16□□□□□ -0.46
SYNE2-215ENST00000554997 C12orf60Q5U649 245 aa12.16□□□□□ -0.46
SYNE2-215ENST00000554997 MAP1SQ66K74 1059 aaPredicted RBP12.16□□□□□ -0.46
SYNE2-215ENST00000554997 CHADLQ6NUI6 762 aa12.16□□□□□ -0.46
SYNE2-215ENST00000554997 ZSCAN29Q8IWY8 852 aaPredicted RBP12.16□□□□□ -0.46
SYNE2-215ENST00000554997 AMOTL1Q8IY63 956 aa12.16□□□□□ -0.46
SYNE2-215ENST00000554997 BACH2Q9BYV9 841 aa12.16□□□□□ -0.46
SYNE2-215ENST00000554997 ARPP21Q9UBL0 812 aaPredicted RBP12.16□□□□□ -0.46
SYNE2-215ENST00000554997 SAP30BPQ9UHR5 308 aaKnown RBP12.16□□□□□ -0.46
SYNE2-215ENST00000554997 TAOK2Q9UL54 1235 aa12.16□□□□□ -0.46
SYNE2-215ENST00000554997 SCAF8Q9UPN6 1271 aaKnown RBP12.16□□□□□ -0.46
SYNE2-215ENST00000554997 MINDY4BA8MYZ0 360 aa12.15□□□□□ -0.46
SYNE2-215ENST00000554997 ZNF213O14771 459 aa12.15□□□□□ -0.46
SYNE2-215ENST00000554997 HLA-DOAP06340 250 aa12.15□□□□□ -0.46
SYNE2-215ENST00000554997 METTL16Q86W50 562 aaKnown RBP12.15□□□□□ -0.46
SYNE2-215ENST00000554997 HOOK2Q96ED9 719 aa12.15□□□□□ -0.46
SYNE2-215ENST00000554997 ANAPC4Q9UJX5 808 aa12.15□□□□□ -0.46
SYNE2-215ENST00000554997 ATRNL1Q5VV63 1379 aa12.15□□□□□ -0.46
SYNE2-215ENST00000554997 ADM5C9JUS6 153 aa12.14□□□□□ -0.47
SYNE2-215ENST00000554997 TBC1D12O60347 775 aa12.14□□□□□ -0.47
SYNE2-215ENST00000554997 TOMM70O94826 608 aa12.14□□□□□ -0.47
SYNE2-215ENST00000554997 ITGBL1O95965 494 aaPredicted RBP12.14□□□□□ -0.47
SYNE2-215ENST00000554997 CYP2D6P10635 497 aa12.14□□□□□ -0.47
SYNE2-215ENST00000554997 IMMTQ16891 758 aaKnown RBP12.14□□□□□ -0.47
SYNE2-215ENST00000554997 NBPF12Q5TAG4 269 aaPredicted RBP12.14□□□□□ -0.47
SYNE2-215ENST00000554997 PRAMEF18Q5VWM3 479 aa12.14□□□□□ -0.47
SYNE2-215ENST00000554997 CSRNP1Q96S65 589 aa12.14□□□□□ -0.47
SYNE2-215ENST00000554997 GLIS2Q9BZE0 524 aaPredicted RBP12.14□□□□□ -0.47
SYNE2-215ENST00000554997 EHD4Q9H223 541 aa12.14□□□□□ -0.47
SYNE2-215ENST00000554997 RBM8AQ9Y5S9 174 aaKnown RBP12.14□□□□□ -0.47
SYNE2-215ENST00000554997 COL2A1P02458 1487 aaPredicted RBP12.14□□□□□ -0.47
SYNE2-215ENST00000554997 CYP2D7A0A087X1C5 515 aa12.13□□□□□ -0.47
SYNE2-215ENST00000554997 SLC3A2P08195 630 aaKnown RBP12.13□□□□□ -0.47
SYNE2-215ENST00000554997 FGRP09769 529 aa12.13□□□□□ -0.47
SYNE2-215ENST00000554997 HSPA4P34932 840 aa12.13□□□□□ -0.47
SYNE2-215ENST00000554997 GABPAQ06546 454 aa12.13□□□□□ -0.47
SYNE2-215ENST00000554997 PPARAQ07869 468 aa12.13□□□□□ -0.47
SYNE2-215ENST00000554997 TSGA10IPQ3SY00 556 aa12.13□□□□□ -0.47
SYNE2-215ENST00000554997 DLK2Q6UY11 383 aa12.13□□□□□ -0.47
SYNE2-215ENST00000554997 RBM46Q8TBY0 533 aaKnown RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms