RNA–Protein interactions for RNA: ENST00000554835.1

PRKCH-210, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-210ENST00000554835 HDAC5Q9UQL6 1122 aa22.55■■□□□ 1.2
PRKCH-210ENST00000554835 PDS5AQ29RF7 1337 aaKnown RBP22.55■■□□□ 1.2
PRKCH-210ENST00000554835 CXCL11O14625 94 aa22.54■■□□□ 1.2
PRKCH-210ENST00000554835 SRGAP3O43295 1099 aa22.54■■□□□ 1.2
PRKCH-210ENST00000554835 CYP2C8P10632 490 aa22.54■■□□□ 1.2
PRKCH-210ENST00000554835 BCRP11274 1271 aa22.54■■□□□ 1.2
PRKCH-210ENST00000554835 PTPRAP18433 802 aa22.54■■□□□ 1.2
PRKCH-210ENST00000554835 OSBPP22059 807 aa22.54■■□□□ 1.2
PRKCH-210ENST00000554835 PRMT2P55345 433 aa22.54■■□□□ 1.2
PRKCH-210ENST00000554835 MTX1Q13505 466 aa22.54■■□□□ 1.2
PRKCH-210ENST00000554835 SCYL3Q8IZE3 742 aa22.54■■□□□ 1.2
PRKCH-210ENST00000554835 ARHGAP45Q92619 1136 aa22.54■■□□□ 1.2
PRKCH-210ENST00000554835 TNNQ9UQP3 1299 aa22.54■■□□□ 1.2
PRKCH-210ENST00000554835 CEP290O15078 2479 aa22.53■■□□□ 1.2
PRKCH-210ENST00000554835 PTPRFP10586 1907 aa22.53■■□□□ 1.2
PRKCH-210ENST00000554835 PHIPQ8WWQ0 1821 aa22.53■■□□□ 1.2
PRKCH-210ENST00000554835 DZIP1Q86YF9 867 aaKnown RBP22.53■■□□□ 1.2
PRKCH-210ENST00000554835 AFG3L2Q9Y4W6 797 aa22.53■■□□□ 1.2
PRKCH-210ENST00000554835 ZHX2Q9Y6X8 837 aa22.53■■□□□ 1.2
PRKCH-210ENST00000554835 A0A0G2JLL6 359 aaPredicted RBP22.52■■□□□ 1.2
PRKCH-210ENST00000554835 BTDP43251 543 aa22.52■■□□□ 1.2
PRKCH-210ENST00000554835 RHBDL3P58872 404 aa22.52■■□□□ 1.2
PRKCH-210ENST00000554835 PRRT2Q7Z6L0 340 aaPredicted RBP22.52■■□□□ 1.2
PRKCH-210ENST00000554835 SHISA4Q96DD7 197 aa22.52■■□□□ 1.2
PRKCH-210ENST00000554835 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.52■■□□□ 1.2
PRKCH-210ENST00000554835 RANBP2P49792 3224 aaKnown RBP22.52■■□□□ 1.2
PRKCH-210ENST00000554835 MGAMO43451 1857 aa22.51■■□□□ 1.19
PRKCH-210ENST00000554835 SZT2Q5T011 3432 aa22.51■■□□□ 1.19
PRKCH-210ENST00000554835 MECOMQ03112 1051 aa22.51■■□□□ 1.19
PRKCH-210ENST00000554835 PI16Q6UXB8 463 aa22.51■■□□□ 1.19
PRKCH-210ENST00000554835 PARK7Q99497 189 aaKnown RBP22.51■■□□□ 1.19
PRKCH-210ENST00000554835 MROH7-TTC4A0A0A0MT08 1334 aa22.51■■□□□ 1.19
PRKCH-210ENST00000554835 DOCK1Q14185 1865 aa22.5■■□□□ 1.19
PRKCH-210ENST00000554835 GPR75-ASB3A0A0A6YYF3 556 aa22.5■■□□□ 1.19
PRKCH-210ENST00000554835 FMNL1O95466 1100 aaPredicted RBP22.5■■□□□ 1.19
PRKCH-210ENST00000554835 GNAI3P08754 354 aa22.5■■□□□ 1.19
PRKCH-210ENST00000554835 PICALMQ13492 652 aa22.5■■□□□ 1.19
PRKCH-210ENST00000554835 ZSCAN29Q8IWY8 852 aaPredicted RBP22.5■■□□□ 1.19
PRKCH-210ENST00000554835 PICK1Q9NRD5 415 aa22.5■■□□□ 1.19
PRKCH-210ENST00000554835 HMG20BQ9P0W2 317 aa22.5■■□□□ 1.19
PRKCH-210ENST00000554835 AKAP2Q9Y2D5 859 aa22.5■■□□□ 1.19
PRKCH-210ENST00000554835 MYPNQ86TC9 1320 aa22.5■■□□□ 1.19
PRKCH-210ENST00000554835 TRIM27P14373 513 aa22.49■■□□□ 1.19
PRKCH-210ENST00000554835 MVPQ14764 893 aaKnown RBP22.49■■□□□ 1.19
PRKCH-210ENST00000554835 SPTY2D1Q68D10 685 aaPredicted RBP22.49■■□□□ 1.19
PRKCH-210ENST00000554835 CCDC84Q86UT8 332 aaPredicted RBP22.49■■□□□ 1.19
PRKCH-210ENST00000554835 CTNND1O60716 968 aaKnown RBP22.48■■□□□ 1.19
PRKCH-210ENST00000554835 HOXD10P28358 340 aa22.48■■□□□ 1.19
PRKCH-210ENST00000554835 GRK4P32298 578 aa22.48■■□□□ 1.19
PRKCH-210ENST00000554835 PRKCZQ05513 592 aa22.48■■□□□ 1.19
PRKCH-210ENST00000554835 TBC1D9Q6ZT07 1266 aa22.48■■□□□ 1.19
PRKCH-210ENST00000554835 ERICH6Q7L0X2 663 aa22.48■■□□□ 1.19
PRKCH-210ENST00000554835 SLF2Q8IX21 1173 aa22.48■■□□□ 1.19
PRKCH-210ENST00000554835 RAET1EQ8TD07 263 aa22.48■■□□□ 1.19
PRKCH-210ENST00000554835 NEUROD6Q96NK8 337 aa22.48■■□□□ 1.19
PRKCH-210ENST00000554835 GABRQQ9UN88 632 aa22.48■■□□□ 1.19
PRKCH-210ENST00000554835 PNMA6EA0A0J9YXQ4 647 aa22.47■■□□□ 1.19
PRKCH-210ENST00000554835 FASTKD5Q7L8L6 764 aaKnown RBP22.47■■□□□ 1.19
PRKCH-210ENST00000554835 NSUN4Q96CB9 384 aaKnown RBP22.47■■□□□ 1.19
PRKCH-210ENST00000554835 FAM196BA6NMK8 535 aa22.46■■□□□ 1.19
PRKCH-210ENST00000554835 CCER2I3L3R5 266 aa22.46■■□□□ 1.19
PRKCH-210ENST00000554835 BCAR3O75815 825 aa22.46■■□□□ 1.19
PRKCH-210ENST00000554835 GADL1Q6ZQY3 521 aa22.46■■□□□ 1.19
PRKCH-210ENST00000554835 SPATA5Q8NB90 893 aa22.46■■□□□ 1.19
PRKCH-210ENST00000554835 COLQQ9Y215 455 aaPredicted RBP22.46■■□□□ 1.19
PRKCH-210ENST00000554835 TRIM75PA6NK02 468 aa22.45■■□□□ 1.18
PRKCH-210ENST00000554835 TBC1D12O60347 775 aa22.45■■□□□ 1.18
PRKCH-210ENST00000554835 NPM3O75607 178 aaKnown RBP22.45■■□□□ 1.18
PRKCH-210ENST00000554835 ARID4AP29374 1257 aaPredicted RBP22.45■■□□□ 1.18
PRKCH-210ENST00000554835 FXR1P51114 621 aaKnown RBP eCLIP22.45■■□□□ 1.18
PRKCH-210ENST00000554835 FCGRTP55899 365 aa22.45■■□□□ 1.18
PRKCH-210ENST00000554835 SLC45A1Q9Y2W3 748 aa22.45■■□□□ 1.18
PRKCH-210ENST00000554835 H0YGN5 161 aa22.44■■□□□ 1.18
PRKCH-210ENST00000554835 CCL5P13501 91 aa22.44■■□□□ 1.18
PRKCH-210ENST00000554835 MCAMP43121 646 aa22.44■■□□□ 1.18
PRKCH-210ENST00000554835 RRP1BQ14684 758 aaKnown RBP22.44■■□□□ 1.18
PRKCH-210ENST00000554835 ATF7IPQ6VMQ6 1270 aa22.44■■□□□ 1.18
PRKCH-210ENST00000554835 UBE2Q1Q7Z7E8 422 aa22.44■■□□□ 1.18
PRKCH-210ENST00000554835 DOCK3Q8IZD9 2030 aa22.44■■□□□ 1.18
PRKCH-210ENST00000554835 TRIOBPQ9H2D6 2365 aa22.43■■□□□ 1.18
PRKCH-210ENST00000554835 GNAI2P04899 355 aa22.43■■□□□ 1.18
PRKCH-210ENST00000554835 GJA8P48165 433 aa22.43■■□□□ 1.18
PRKCH-210ENST00000554835 TREML2Q5T2D2 321 aa22.43■■□□□ 1.18
PRKCH-210ENST00000554835 CLUAP1Q96AJ1 413 aa22.43■■□□□ 1.18
PRKCH-210ENST00000554835 GJB1P08034 283 aa22.42■■□□□ 1.18
PRKCH-210ENST00000554835 IPO8O15397 1037 aaKnown RBP22.41■■□□□ 1.18
PRKCH-210ENST00000554835 FLT3LGP49771 235 aa22.41■■□□□ 1.18
PRKCH-210ENST00000554835 GORABQ5T7V8 394 aa22.41■■□□□ 1.18
PRKCH-210ENST00000554835 FRAT1Q92837 279 aaPredicted RBP22.41■■□□□ 1.18
PRKCH-210ENST00000554835 RNF208Q9H0X6 261 aa22.41■■□□□ 1.18
PRKCH-210ENST00000554835 OSBPL5Q9H0X9 879 aaPredicted RBP22.41■■□□□ 1.18
PRKCH-210ENST00000554835 UNC93B1Q9H1C4 597 aa22.41■■□□□ 1.18
PRKCH-210ENST00000554835 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.41■■□□□ 1.18
PRKCH-210ENST00000554835 RAI14Q9P0K7 980 aa22.41■■□□□ 1.18
PRKCH-210ENST00000554835 AGTPBP1Q9UPW5 1226 aa22.41■■□□□ 1.18
PRKCH-210ENST00000554835 COL2A1P02458 1487 aaPredicted RBP22.41■■□□□ 1.18
PRKCH-210ENST00000554835 SIPA1L1O43166 1804 aa22.41■■□□□ 1.18
PRKCH-210ENST00000554835 ATAD5Q96QE3 1844 aa22.41■■□□□ 1.18
PRKCH-210ENST00000554835 GSTO1P78417 241 aa22.4■■□□□ 1.18
PRKCH-210ENST00000554835 G3BP1Q13283 466 aaKnown RBP eCLIP22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms