RNA–Protein interactions for RNA: ENST00000554574.1

PPP4R3A-204, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 2

Gene PPP4R3A, Length 1,944 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-204ENST00000554574 TMEM102Q8N9M5 508 aaPredicted RBP6.34□□□□□ -1.39
PPP4R3A-204ENST00000554574 GTPBP3Q969Y2 492 aaKnown RBP6.34□□□□□ -1.39
PPP4R3A-204ENST00000554574 SEC16BQ96JE7 1060 aa6.34□□□□□ -1.39
PPP4R3A-204ENST00000554574 TESK2Q96S53 571 aa6.34□□□□□ -1.39
PPP4R3A-204ENST00000554574 ZSWIM4Q9H7M6 989 aa6.34□□□□□ -1.39
PPP4R3A-204ENST00000554574 GINM1Q9NU53 330 aa6.34□□□□□ -1.39
PPP4R3A-204ENST00000554574 SLC52A1Q9NWF4 448 aa6.34□□□□□ -1.39
PPP4R3A-204ENST00000554574 ATXN7L1Q9ULK2 861 aaPredicted RBP6.34□□□□□ -1.39
PPP4R3A-204ENST00000554574 EFR3BQ9Y2G0 817 aa6.34□□□□□ -1.39
PPP4R3A-204ENST00000554574 ERVK-7P63135 1459 aa6.34□□□□□ -1.39
PPP4R3A-204ENST00000554574 MYOM1P52179 1685 aa6.33□□□□□ -1.4
PPP4R3A-204ENST00000554574 EIF3AQ14152 1382 aaKnown RBP6.33□□□□□ -1.4
PPP4R3A-204ENST00000554574 A0A096LPE4 126 aa6.33□□□□□ -1.4
PPP4R3A-204ENST00000554574 A0A1W2PPZ6 126 aa6.33□□□□□ -1.4
PPP4R3A-204ENST00000554574 NRG2O14511 850 aaPredicted RBP6.33□□□□□ -1.4
PPP4R3A-204ENST00000554574 GFRA3O60609 400 aa6.33□□□□□ -1.4
PPP4R3A-204ENST00000554574 PAGE1O75459 146 aa6.33□□□□□ -1.4
PPP4R3A-204ENST00000554574 PF4P02776 101 aa6.33□□□□□ -1.4
PPP4R3A-204ENST00000554574 RLBP1P12271 317 aa6.33□□□□□ -1.4
PPP4R3A-204ENST00000554574 HSP90B1P14625 803 aaKnown RBP6.33□□□□□ -1.4
PPP4R3A-204ENST00000554574 GPLD1P80108 840 aa6.33□□□□□ -1.4
PPP4R3A-204ENST00000554574 FAAP100Q0VG06 881 aa6.33□□□□□ -1.4
PPP4R3A-204ENST00000554574 HFE2Q6ZVN8 426 aa6.33□□□□□ -1.4
PPP4R3A-204ENST00000554574 NECAB3Q96P71 396 aaPredicted RBP6.33□□□□□ -1.4
PPP4R3A-204ENST00000554574 CEP44Q9C0F1 390 aa6.33□□□□□ -1.4
PPP4R3A-204ENST00000554574 OSBPL2Q9H1P3 480 aa6.33□□□□□ -1.4
PPP4R3A-204ENST00000554574 RASSF4Q9H2L5 321 aa6.33□□□□□ -1.4
PPP4R3A-204ENST00000554574 ZNF576Q9H609 170 aa6.33□□□□□ -1.4
PPP4R3A-204ENST00000554574 PRKRIP1Q9H875 184 aaPredicted RBP6.33□□□□□ -1.4
PPP4R3A-204ENST00000554574 SEC31BQ9NQW1 1179 aa6.33□□□□□ -1.4
PPP4R3A-204ENST00000554574 ARHGEF28Q8N1W1 1705 aaKnown RBP6.33□□□□□ -1.4
PPP4R3A-204ENST00000554574 ZFYVE9O95405 1425 aa6.33□□□□□ -1.4
PPP4R3A-204ENST00000554574 QRICH2Q9H0J4 1663 aa6.33□□□□□ -1.4
PPP4R3A-204ENST00000554574 ADGRB1O14514 1584 aa6.33□□□□□ -1.4
PPP4R3A-204ENST00000554574 FGFR3P22607 806 aa6.33□□□□□ -1.4
PPP4R3A-204ENST00000554574 ITGA6P23229 1130 aa6.33□□□□□ -1.4
PPP4R3A-204ENST00000554574 CANXP27824 592 aaKnown RBP6.33□□□□□ -1.4
PPP4R3A-204ENST00000554574 TRPM4Q8TD43 1214 aa6.33□□□□□ -1.4
PPP4R3A-204ENST00000554574 ASAP3Q8TDY4 903 aa6.33□□□□□ -1.4
PPP4R3A-204ENST00000554574 SPACA7Q96KW9 195 aa6.33□□□□□ -1.4
PPP4R3A-204ENST00000554574 ZNF408Q9H9D4 720 aa6.33□□□□□ -1.4
PPP4R3A-204ENST00000554574 UBP1Q9NZI7 540 aa6.33□□□□□ -1.4
PPP4R3A-204ENST00000554574 ADGRF5Q8IZF2 1346 aa6.32□□□□□ -1.4
PPP4R3A-204ENST00000554574 DISP3Q9P2K9 1392 aa6.32□□□□□ -1.4
PPP4R3A-204ENST00000554574 LOC102724428A0A0B4J2F2 783 aa6.32□□□□□ -1.4
PPP4R3A-204ENST00000554574 PDE2AO00408 941 aaPredicted RBP6.32□□□□□ -1.4
PPP4R3A-204ENST00000554574 GREM1O60565 184 aa6.32□□□□□ -1.4
PPP4R3A-204ENST00000554574 SSBP05455 408 aaKnown RBP eCLIP6.32□□□□□ -1.4
PPP4R3A-204ENST00000554574 TFE3P19532 575 aaPredicted RBP6.32□□□□□ -1.4
PPP4R3A-204ENST00000554574 CRKP46108 304 aa6.32□□□□□ -1.4
PPP4R3A-204ENST00000554574 SIK1P57059 783 aa6.32□□□□□ -1.4
PPP4R3A-204ENST00000554574 FAM182BQ5T319 152 aa6.32□□□□□ -1.4
PPP4R3A-204ENST00000554574 SOGA3Q5TF21 947 aa6.32□□□□□ -1.4
PPP4R3A-204ENST00000554574 TTBK2Q6IQ55 1244 aa6.32□□□□□ -1.4
PPP4R3A-204ENST00000554574 NT5C1AQ9BXI3 368 aa6.32□□□□□ -1.4
PPP4R3A-204ENST00000554574 PBX4Q9BYU1 374 aa6.32□□□□□ -1.4
PPP4R3A-204ENST00000554574 ZFYVE1Q9HBF4 777 aa6.32□□□□□ -1.4
PPP4R3A-204ENST00000554574 SUPT16HQ9Y5B9 1047 aaKnown RBP6.32□□□□□ -1.4
PPP4R3A-204ENST00000554574 KTN1Q86UP2 1357 aaKnown RBP6.31□□□□□ -1.4
PPP4R3A-204ENST00000554574 SBNO2Q9Y2G9 1366 aa6.31□□□□□ -1.4
PPP4R3A-204ENST00000554574 SOX9P48436 509 aa6.31□□□□□ -1.4
PPP4R3A-204ENST00000554574 TMF1P82094 1093 aa6.31□□□□□ -1.4
PPP4R3A-204ENST00000554574 CTBSQ01459 385 aa6.31□□□□□ -1.4
PPP4R3A-204ENST00000554574 CAMK2GQ13555 558 aaPredicted RBP6.31□□□□□ -1.4
PPP4R3A-204ENST00000554574 IDI1Q13907 227 aa6.31□□□□□ -1.4
PPP4R3A-204ENST00000554574 BMS1Q14692 1282 aaKnown RBP6.31□□□□□ -1.4
PPP4R3A-204ENST00000554574 AGMOQ6ZNB7 445 aa6.31□□□□□ -1.4
PPP4R3A-204ENST00000554574 GOLM1Q8NBJ4 401 aa6.31□□□□□ -1.4
PPP4R3A-204ENST00000554574 MUC3BQ9H195 1237 aa6.31□□□□□ -1.4
PPP4R3A-204ENST00000554574 IGFLR1Q9H665 355 aa6.31□□□□□ -1.4
PPP4R3A-204ENST00000554574 GPR25O00155 361 aa6.31□□□□□ -1.4
PPP4R3A-204ENST00000554574 LMNB2Q03252 620 aa6.31□□□□□ -1.4
PPP4R3A-204ENST00000554574 NFX1Q12986 1120 aaKnown RBP6.31□□□□□ -1.4
PPP4R3A-204ENST00000554574 SNAP47Q5SQN1 464 aa6.31□□□□□ -1.4
PPP4R3A-204ENST00000554574 CKAP2LQ8IYA6 745 aa6.31□□□□□ -1.4
PPP4R3A-204ENST00000554574 GMCL1Q96IK5 515 aa6.31□□□□□ -1.4
PPP4R3A-204ENST00000554574 POP1Q99575 1024 aaKnown RBP6.31□□□□□ -1.4
PPP4R3A-204ENST00000554574 DNAJB12Q9NXW2 375 aaKnown RBP6.31□□□□□ -1.4
PPP4R3A-204ENST00000554574 GPN3Q9UHW5 284 aaPredicted RBP6.31□□□□□ -1.4
PPP4R3A-204ENST00000554574 MRVI1Q9Y6F6 885 aa6.31□□□□□ -1.4
PPP4R3A-204ENST00000554574 FER1L4A9Z1Z3 1794 aa6.3□□□□□ -1.4
PPP4R3A-204ENST00000554574 SETD1AO15047 1707 aaKnown RBP6.3□□□□□ -1.4
PPP4R3A-204ENST00000554574 ETFBP38117 255 aa6.3□□□□□ -1.4
PPP4R3A-204ENST00000554574 ZNF157P51786 506 aaPredicted RBP6.3□□□□□ -1.4
PPP4R3A-204ENST00000554574 TBC1D8BQ0IIM8 1120 aa6.3□□□□□ -1.4
PPP4R3A-204ENST00000554574 RPS26P11Q5JNZ5 115 aaPredicted RBP6.3□□□□□ -1.4
PPP4R3A-204ENST00000554574 RASIP1Q5U651 963 aa6.3□□□□□ -1.4
PPP4R3A-204ENST00000554574 PCNX4Q63HM2 1172 aa6.3□□□□□ -1.4
PPP4R3A-204ENST00000554574 ADAMTSL4Q6UY14 1074 aa6.3□□□□□ -1.4
PPP4R3A-204ENST00000554574 POLR3GLQ9BT43 218 aa6.3□□□□□ -1.4
PPP4R3A-204ENST00000554574 C14orf93Q9H972 538 aaKnown RBP6.3□□□□□ -1.4
PPP4R3A-204ENST00000554574 TMA7Q9Y2S6 64 aaKnown RBP6.3□□□□□ -1.4
PPP4R3A-204ENST00000554574 TLDC2A0PJX2 215 aa6.29□□□□□ -1.4
PPP4R3A-204ENST00000554574 HMGB1P09429 215 aaKnown RBP6.29□□□□□ -1.4
PPP4R3A-204ENST00000554574 APOBRQ0VD83 1088 aa6.29□□□□□ -1.4
PPP4R3A-204ENST00000554574 SYT9Q86SS6 491 aa6.29□□□□□ -1.4
PPP4R3A-204ENST00000554574 PHF24Q9UPV7 400 aa6.29□□□□□ -1.4
PPP4R3A-204ENST00000554574 TBX22Q9Y458 520 aa6.29□□□□□ -1.4
PPP4R3A-204ENST00000554574 UBR1Q8IWV7 1749 aa6.29□□□□□ -1.4
PPP4R3A-204ENST00000554574 C3P01024 1663 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms