RNA–Protein interactions for RNA: ENST00000554508.5

ACTN1-213, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-213ENST00000554508 OTUD5Q96G74 571 aa10.68□□□□□ -0.7
ACTN1-213ENST00000554508 NOL10Q9BSC4 688 aaKnown RBP10.68□□□□□ -0.7
ACTN1-213ENST00000554508 CCDC8Q9H0W5 538 aaPredicted RBP10.68□□□□□ -0.7
ACTN1-213ENST00000554508 DBNLQ9UJU6 430 aaKnown RBP10.68□□□□□ -0.7
ACTN1-213ENST00000554508 EXOC6BQ9Y2D4 811 aa10.68□□□□□ -0.7
ACTN1-213ENST00000554508 SNCAIPQ9Y6H5 919 aa10.68□□□□□ -0.7
ACTN1-213ENST00000554508 CDK5RAP2Q96SN8 1893 aa10.68□□□□□ -0.7
ACTN1-213ENST00000554508 MAST2Q6P0Q8 1798 aa10.67□□□□□ -0.7
ACTN1-213ENST00000554508 RFX7Q2KHR2 1363 aa10.67□□□□□ -0.7
ACTN1-213ENST00000554508 CCL15-CCL14A0A0B4J2E2 113 aa10.67□□□□□ -0.7
ACTN1-213ENST00000554508 CCDC85CA6NKD9 419 aa10.67□□□□□ -0.7
ACTN1-213ENST00000554508 RAB11FIP3O75154 756 aa10.67□□□□□ -0.7
ACTN1-213ENST00000554508 BAG3O95817 575 aa10.67□□□□□ -0.7
ACTN1-213ENST00000554508 CYP2E1P05181 493 aaPredicted RBP10.67□□□□□ -0.7
ACTN1-213ENST00000554508 CETPP11597 493 aa10.67□□□□□ -0.7
ACTN1-213ENST00000554508 RHBDL3P58872 404 aa10.67□□□□□ -0.7
ACTN1-213ENST00000554508 SNAPC2Q13487 334 aa10.67□□□□□ -0.7
ACTN1-213ENST00000554508 CCL15Q16663 113 aa10.67□□□□□ -0.7
ACTN1-213ENST00000554508 NOL9Q5SY16 702 aaKnown RBP10.67□□□□□ -0.7
ACTN1-213ENST00000554508 NAA16Q6N069 864 aaPredicted RBP10.67□□□□□ -0.7
ACTN1-213ENST00000554508 RHPN1Q8TCX5 695 aa10.67□□□□□ -0.7
ACTN1-213ENST00000554508 CNKSR2Q8WXI2 1034 aa10.67□□□□□ -0.7
ACTN1-213ENST00000554508 KIF1BPQ96EK5 621 aa10.67□□□□□ -0.7
ACTN1-213ENST00000554508 PTPN18Q99952 460 aa10.67□□□□□ -0.7
ACTN1-213ENST00000554508 R3HDMLQ9H3Y0 253 aa10.67□□□□□ -0.7
ACTN1-213ENST00000554508 ZCCHC17Q9NP64 241 aaKnown RBP10.67□□□□□ -0.7
ACTN1-213ENST00000554508 SNRKQ9NRH2 765 aa10.67□□□□□ -0.7
ACTN1-213ENST00000554508 FOCADQ5VW36 1801 aa10.66□□□□□ -0.7
ACTN1-213ENST00000554508 IRF6O14896 467 aa10.66□□□□□ -0.7
ACTN1-213ENST00000554508 TBC1D12O60347 775 aa10.66□□□□□ -0.7
ACTN1-213ENST00000554508 PLCG2P16885 1265 aa10.66□□□□□ -0.7
ACTN1-213ENST00000554508 INPP5BP32019 993 aa10.66□□□□□ -0.7
ACTN1-213ENST00000554508 ZAP70P43403 619 aa10.66□□□□□ -0.7
ACTN1-213ENST00000554508 PPP4CP60510 307 aa10.66□□□□□ -0.7
ACTN1-213ENST00000554508 PICALMQ13492 652 aa10.66□□□□□ -0.7
ACTN1-213ENST00000554508 TMED8Q6PL24 325 aaPredicted RBP10.66□□□□□ -0.7
ACTN1-213ENST00000554508 SH3BP5LQ7L8J4 393 aa10.66□□□□□ -0.7
ACTN1-213ENST00000554508 AACSQ86V21 672 aa10.66□□□□□ -0.7
ACTN1-213ENST00000554508 CLASRPQ8N2M8 674 aaKnown RBP10.66□□□□□ -0.7
ACTN1-213ENST00000554508 BRI3BPQ8WY22 251 aa10.66□□□□□ -0.7
ACTN1-213ENST00000554508 ZFYVE28Q9HCC9 887 aa10.66□□□□□ -0.7
ACTN1-213ENST00000554508 DDX4Q9NQI0 724 aaKnown RBP10.66□□□□□ -0.7
ACTN1-213ENST00000554508 ATRNL1Q5VV63 1379 aa10.65□□□□□ -0.7
ACTN1-213ENST00000554508 MYH1P12882 1939 aa10.65□□□□□ -0.7
ACTN1-213ENST00000554508 DDTLA6NHG4 134 aaPredicted RBP10.65□□□□□ -0.7
ACTN1-213ENST00000554508 PHF20L1A8MW92 1017 aa10.65□□□□□ -0.7
ACTN1-213ENST00000554508 CRHR2Q13324 411 aa10.65□□□□□ -0.7
ACTN1-213ENST00000554508 TAF1CQ15572 869 aaPredicted RBP10.65□□□□□ -0.7
ACTN1-213ENST00000554508 SIRT2Q8IXJ6 389 aa10.65□□□□□ -0.7
ACTN1-213ENST00000554508 TEX11Q8IYF3 940 aa10.65□□□□□ -0.7
ACTN1-213ENST00000554508 ERO1AQ96HE7 468 aa10.65□□□□□ -0.7
ACTN1-213ENST00000554508 TLR7Q9NYK1 1049 aaKnown RBP10.65□□□□□ -0.7
ACTN1-213ENST00000554508 KCNH4Q9UQ05 1017 aa10.65□□□□□ -0.7
ACTN1-213ENST00000554508 COL2A1P02458 1487 aaPredicted RBP10.65□□□□□ -0.7
ACTN1-213ENST00000554508 DOCK1Q14185 1865 aa10.65□□□□□ -0.7
ACTN1-213ENST00000554508 PTPRFP10586 1907 aa10.64□□□□□ -0.71
ACTN1-213ENST00000554508 PHIPQ8WWQ0 1821 aa10.64□□□□□ -0.71
ACTN1-213ENST00000554508 ATAD5Q96QE3 1844 aa10.64□□□□□ -0.71
ACTN1-213ENST00000554508 CXCL11O14625 94 aa10.64□□□□□ -0.71
ACTN1-213ENST00000554508 CTNND1O60716 968 aaKnown RBP10.64□□□□□ -0.71
ACTN1-213ENST00000554508 SP3Q02447 781 aa10.64□□□□□ -0.71
ACTN1-213ENST00000554508 C20orf194Q5TEA3 1177 aa10.64□□□□□ -0.71
ACTN1-213ENST00000554508 CERS3Q8IU89 383 aa10.64□□□□□ -0.71
ACTN1-213ENST00000554508 SCYL3Q8IZE3 742 aa10.64□□□□□ -0.71
ACTN1-213ENST00000554508 OSBPL5Q9H0X9 879 aaPredicted RBP10.64□□□□□ -0.71
ACTN1-213ENST00000554508 IL1RAPL2Q9NP60 686 aa10.64□□□□□ -0.71
ACTN1-213ENST00000554508 PIH1D3Q9NQM4 214 aaKnown RBP10.64□□□□□ -0.71
ACTN1-213ENST00000554508 PICK1Q9NRD5 415 aa10.64□□□□□ -0.71
ACTN1-213ENST00000554508 AATFQ9NY61 560 aaKnown RBP eCLIP10.64□□□□□ -0.71
ACTN1-213ENST00000554508 BTBD19C9JJ37 291 aa10.63□□□□□ -0.71
ACTN1-213ENST00000554508 IDH1O75874 414 aaKnown RBP10.63□□□□□ -0.71
ACTN1-213ENST00000554508 IFIT2P09913 472 aaKnown RBP10.63□□□□□ -0.71
ACTN1-213ENST00000554508 RGS19P49795 217 aa10.63□□□□□ -0.71
ACTN1-213ENST00000554508 MAP3K12Q12852 859 aa10.63□□□□□ -0.71
ACTN1-213ENST00000554508 ARHGEF6Q15052 776 aa10.63□□□□□ -0.71
ACTN1-213ENST00000554508 TTF1Q15361 905 aaPredicted RBP10.63□□□□□ -0.71
ACTN1-213ENST00000554508 FBXO46Q6PJ61 603 aaPredicted RBP10.63□□□□□ -0.71
ACTN1-213ENST00000554508 ANKRD23Q86SG2 305 aa10.63□□□□□ -0.71
ACTN1-213ENST00000554508 FAM43AQ8N2R8 423 aa10.63□□□□□ -0.71
ACTN1-213ENST00000554508 SH3RF3Q8TEJ3 882 aaPredicted RBP10.63□□□□□ -0.71
ACTN1-213ENST00000554508 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.63□□□□□ -0.71
ACTN1-213ENST00000554508 DHX36Q9H2U1 1008 aaKnown RBP10.63□□□□□ -0.71
ACTN1-213ENST00000554508 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.63□□□□□ -0.71
ACTN1-213ENST00000554508 APBB1O00213 710 aa10.62□□□□□ -0.71
ACTN1-213ENST00000554508 TLR2O60603 784 aa10.62□□□□□ -0.71
ACTN1-213ENST00000554508 CYP7A1P22680 504 aa10.62□□□□□ -0.71
ACTN1-213ENST00000554508 OTOP1Q7RTM1 612 aa10.62□□□□□ -0.71
ACTN1-213ENST00000554508 ADGRA1Q86SQ6 560 aa10.62□□□□□ -0.71
ACTN1-213ENST00000554508 FOXP4Q8IVH2 680 aaPredicted RBP10.62□□□□□ -0.71
ACTN1-213ENST00000554508 PI4KBQ9UBF8 816 aa10.62□□□□□ -0.71
ACTN1-213ENST00000554508 HERC5Q9UII4 1024 aaKnown RBP10.62□□□□□ -0.71
ACTN1-213ENST00000554508 HPS5Q9UPZ3 1129 aa10.62□□□□□ -0.71
ACTN1-213ENST00000554508 AFG3L2Q9Y4W6 797 aa10.62□□□□□ -0.71
ACTN1-213ENST00000554508 ZHX2Q9Y6X8 837 aa10.62□□□□□ -0.71
ACTN1-213ENST00000554508 SIPA1L1O43166 1804 aa10.61□□□□□ -0.71
ACTN1-213ENST00000554508 MYH7P12883 1935 aa10.61□□□□□ -0.71
ACTN1-213ENST00000554508 PTPRAP18433 802 aa10.61□□□□□ -0.71
ACTN1-213ENST00000554508 FASTKD5Q7L8L6 764 aaKnown RBP10.61□□□□□ -0.71
ACTN1-213ENST00000554508 MAGEB6Q8N7X4 407 aa10.61□□□□□ -0.71
ACTN1-213ENST00000554508 CD99L2Q8TCZ2 262 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms