RNA–Protein interactions for RNA: ENST00000554453.5

ABCD4-221, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 5

Gene ABCD4, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-221ENST00000554453 TNNI3KQ59H18 835 aa13.68□□□□□ -0.22
ABCD4-221ENST00000554453 CCDC158Q5M9N0 1113 aa13.68□□□□□ -0.22
ABCD4-221ENST00000554453 PI16Q6UXB8 463 aa13.68□□□□□ -0.22
ABCD4-221ENST00000554453 SH3BP5LQ7L8J4 393 aa13.68□□□□□ -0.22
ABCD4-221ENST00000554453 DDX4Q9NQI0 724 aaKnown RBP13.68□□□□□ -0.22
ABCD4-221ENST00000554453 KCNH4Q9UQ05 1017 aa13.68□□□□□ -0.22
ABCD4-221ENST00000554453 FPGT-TNNI3KV9GXZ4 949 aa13.68□□□□□ -0.22
ABCD4-221ENST00000554453 MROH7-TTC4A0A0A0MT08 1334 aa13.67□□□□□ -0.22
ABCD4-221ENST00000554453 DDTLA6NHG4 134 aaPredicted RBP13.67□□□□□ -0.22
ABCD4-221ENST00000554453 CXCL11O14625 94 aa13.67□□□□□ -0.22
ABCD4-221ENST00000554453 TLR2O60603 784 aa13.67□□□□□ -0.22
ABCD4-221ENST00000554453 IGSF3O75054 1194 aa13.67□□□□□ -0.22
ABCD4-221ENST00000554453 MS4A1P11836 297 aa13.67□□□□□ -0.22
ABCD4-221ENST00000554453 SOX10P56693 466 aa13.67□□□□□ -0.22
ABCD4-221ENST00000554453 OS9Q13438 667 aaPredicted RBP13.67□□□□□ -0.22
ABCD4-221ENST00000554453 ARHGEF6Q15052 776 aa13.67□□□□□ -0.22
ABCD4-221ENST00000554453 CD99L2Q8TCZ2 262 aa13.67□□□□□ -0.22
ABCD4-221ENST00000554453 ZNF512BQ96KM6 892 aaPredicted RBP13.67□□□□□ -0.22
ABCD4-221ENST00000554453 DBNDD2Q9BQY9 259 aa13.67□□□□□ -0.22
ABCD4-221ENST00000554453 C1orf115Q9H7X2 142 aa13.67□□□□□ -0.22
ABCD4-221ENST00000554453 EFCC1Q9HA90 598 aa13.67□□□□□ -0.22
ABCD4-221ENST00000554453 PTPN22Q9Y2R2 807 aa13.67□□□□□ -0.22
ABCD4-221ENST00000554453 TBC1D12O60347 775 aa13.66□□□□□ -0.22
ABCD4-221ENST00000554453 ZSCAN29Q8IWY8 852 aaPredicted RBP13.66□□□□□ -0.22
ABCD4-221ENST00000554453 RAI14Q9P0K7 980 aa13.66□□□□□ -0.22
ABCD4-221ENST00000554453 LRP2BPQ9P2M1 347 aa13.66□□□□□ -0.22
ABCD4-221ENST00000554453 CTNND1O60716 968 aaKnown RBP13.65□□□□□ -0.22
ABCD4-221ENST00000554453 PPP4CP60510 307 aa13.65□□□□□ -0.22
ABCD4-221ENST00000554453 CAP1Q01518 475 aa13.65□□□□□ -0.22
ABCD4-221ENST00000554453 TTC39AQ5SRH9 613 aa13.65□□□□□ -0.22
ABCD4-221ENST00000554453 CEP85Q6P2H3 762 aa13.65□□□□□ -0.22
ABCD4-221ENST00000554453 ANKRD23Q86SG2 305 aa13.65□□□□□ -0.22
ABCD4-221ENST00000554453 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.65□□□□□ -0.22
ABCD4-221ENST00000554453 PANK1Q8TE04 598 aa13.65□□□□□ -0.22
ABCD4-221ENST00000554453 ATRNL1Q5VV63 1379 aa13.65□□□□□ -0.22
ABCD4-221ENST00000554453 RFX7Q2KHR2 1363 aa13.64□□□□□ -0.23
ABCD4-221ENST00000554453 PICALMQ13492 652 aa13.64□□□□□ -0.23
ABCD4-221ENST00000554453 MOGSQ13724 837 aa13.64□□□□□ -0.23
ABCD4-221ENST00000554453 C17orf99Q6UX52 265 aa13.64□□□□□ -0.23
ABCD4-221ENST00000554453 SCYL3Q8IZE3 742 aa13.64□□□□□ -0.23
ABCD4-221ENST00000554453 EAF2Q96CJ1 260 aaPredicted RBP13.64□□□□□ -0.23
ABCD4-221ENST00000554453 CCDC8Q9H0W5 538 aaPredicted RBP13.64□□□□□ -0.23
ABCD4-221ENST00000554453 SNRKQ9NRH2 765 aa13.64□□□□□ -0.23
ABCD4-221ENST00000554453 ZHX2Q9Y6X8 837 aa13.64□□□□□ -0.23
ABCD4-221ENST00000554453 CYP2E1P05181 493 aaPredicted RBP13.63□□□□□ -0.23
ABCD4-221ENST00000554453 PTPRAP18433 802 aa13.63□□□□□ -0.23
ABCD4-221ENST00000554453 DBNLQ9UJU6 430 aaKnown RBP13.63□□□□□ -0.23
ABCD4-221ENST00000554453 AFG3L2Q9Y4W6 797 aa13.63□□□□□ -0.23
ABCD4-221ENST00000554453 PDHXO00330 501 aa13.62□□□□□ -0.23
ABCD4-221ENST00000554453 BAG3O95817 575 aa13.62□□□□□ -0.23
ABCD4-221ENST00000554453 SLURP2P0DP57 97 aa13.62□□□□□ -0.23
ABCD4-221ENST00000554453 PLCG2P16885 1265 aa13.62□□□□□ -0.23
ABCD4-221ENST00000554453 ZAP70P43403 619 aa13.62□□□□□ -0.23
ABCD4-221ENST00000554453 HSP90AB4PQ58FF6 505 aa13.62□□□□□ -0.23
ABCD4-221ENST00000554453 NAA16Q6N069 864 aaPredicted RBP13.62□□□□□ -0.23
ABCD4-221ENST00000554453 GPAT2Q6NUI2 795 aa13.62□□□□□ -0.23
ABCD4-221ENST00000554453 FASTKD5Q7L8L6 764 aaKnown RBP13.62□□□□□ -0.23
ABCD4-221ENST00000554453 ERC1Q8IUD2 1116 aa13.62□□□□□ -0.23
ABCD4-221ENST00000554453 RPAP2Q8IXW5 612 aaPredicted RBP13.62□□□□□ -0.23
ABCD4-221ENST00000554453 ARMC5Q96C12 935 aa13.62□□□□□ -0.23
ABCD4-221ENST00000554453 OSBPL5Q9H0X9 879 aaPredicted RBP13.62□□□□□ -0.23
ABCD4-221ENST00000554453 PICK1Q9NRD5 415 aa13.62□□□□□ -0.23
ABCD4-221ENST00000554453 GNRH1P01148 92 aa13.61□□□□□ -0.23
ABCD4-221ENST00000554453 LACTBP83111 547 aaPredicted RBP13.61□□□□□ -0.23
ABCD4-221ENST00000554453 KIF22Q14807 665 aa13.61□□□□□ -0.23
ABCD4-221ENST00000554453 TEX11Q8IYF3 940 aa13.61□□□□□ -0.23
ABCD4-221ENST00000554453 NOL10Q9BSC4 688 aaKnown RBP13.61□□□□□ -0.23
ABCD4-221ENST00000554453 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.61□□□□□ -0.23
ABCD4-221ENST00000554453 EXOC6BQ9Y2D4 811 aa13.61□□□□□ -0.23
ABCD4-221ENST00000554453 A0A0G2JLL6 359 aaPredicted RBP13.6□□□□□ -0.23
ABCD4-221ENST00000554453 PRMT2P55345 433 aa13.6□□□□□ -0.23
ABCD4-221ENST00000554453 PRRT2Q7Z6L0 340 aaPredicted RBP13.6□□□□□ -0.23
ABCD4-221ENST00000554453 FOXP4Q8IVH2 680 aaPredicted RBP13.6□□□□□ -0.23
ABCD4-221ENST00000554453 DOCK3Q8IZD9 2030 aa13.6□□□□□ -0.23
ABCD4-221ENST00000554453 SH3RF3Q8TEJ3 882 aaPredicted RBP13.6□□□□□ -0.23
ABCD4-221ENST00000554453 DHX36Q9H2U1 1008 aaKnown RBP13.6□□□□□ -0.23
ABCD4-221ENST00000554453 CHMP4BQ9H444 224 aaKnown RBP13.6□□□□□ -0.23
ABCD4-221ENST00000554453 PIH1D3Q9NQM4 214 aaKnown RBP13.6□□□□□ -0.23
ABCD4-221ENST00000554453 ZBTB40Q9NUA8 1239 aa13.6□□□□□ -0.23
ABCD4-221ENST00000554453 AATFQ9NY61 560 aaKnown RBP eCLIP13.6□□□□□ -0.23
ABCD4-221ENST00000554453 PI4KBQ9UBF8 816 aa13.6□□□□□ -0.23
ABCD4-221ENST00000554453 RCAN3Q9UKA8 241 aa13.6□□□□□ -0.23
ABCD4-221ENST00000554453 DDX19BQ9UMR2 479 aa13.6□□□□□ -0.23
ABCD4-221ENST00000554453 MYO5AQ9Y4I1 1855 aaKnown RBP13.59□□□□□ -0.23
ABCD4-221ENST00000554453 CAP2P40123 477 aa13.59□□□□□ -0.23
ABCD4-221ENST00000554453 TMED8Q6PL24 325 aaPredicted RBP13.59□□□□□ -0.23
ABCD4-221ENST00000554453 NBPF11Q86T75 865 aa13.59□□□□□ -0.23
ABCD4-221ENST00000554453 RHPN1Q8TCX5 695 aa13.59□□□□□ -0.23
ABCD4-221ENST00000554453 ARHGAP39Q9C0H5 1083 aa13.59□□□□□ -0.23
ABCD4-221ENST00000554453 TLR7Q9NYK1 1049 aaKnown RBP13.59□□□□□ -0.23
ABCD4-221ENST00000554453 CPA4Q9UI42 421 aa13.59□□□□□ -0.23
ABCD4-221ENST00000554453 HERC5Q9UII4 1024 aaKnown RBP13.59□□□□□ -0.23
ABCD4-221ENST00000554453 COG6Q9Y2V7 657 aa13.59□□□□□ -0.23
ABCD4-221ENST00000554453 SLC45A1Q9Y2W3 748 aa13.59□□□□□ -0.23
ABCD4-221ENST00000554453 ADGRA2Q96PE1 1338 aa13.59□□□□□ -0.23
ABCD4-221ENST00000554453 BCRP11274 1271 aa13.58□□□□□ -0.24
ABCD4-221ENST00000554453 CYP7A1P22680 504 aa13.58□□□□□ -0.24
ABCD4-221ENST00000554453 HOXD10P28358 340 aa13.58□□□□□ -0.24
ABCD4-221ENST00000554453 ADGRA1Q86SQ6 560 aa13.58□□□□□ -0.24
ABCD4-221ENST00000554453 AACSQ86V21 672 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms