RNA–Protein interactions for RNA: ENST00000554439.5

PRPF39-207, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,982 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-207ENST00000554439 GMLQ99445 158 aa3.07□□□□□ -1.92
PRPF39-207ENST00000554439 API5Q9BZZ5 524 aaKnown RBP3.07□□□□□ -1.92
PRPF39-207ENST00000554439 CHMP4BQ9H444 224 aaKnown RBP3.07□□□□□ -1.92
PRPF39-207ENST00000554439 POLIQ9UNA4 740 aa3.07□□□□□ -1.92
PRPF39-207ENST00000554439 CNPY2Q9Y2B0 182 aa3.07□□□□□ -1.92
PRPF39-207ENST00000554439 YTHDC2Q9H6S0 1430 aaKnown RBP3.07□□□□□ -1.92
PRPF39-207ENST00000554439 NEXMIFQ5QGS0 1516 aa3.07□□□□□ -1.92
PRPF39-207ENST00000554439 ABCA9Q8IUA7 1624 aa3.07□□□□□ -1.92
PRPF39-207ENST00000554439 ANKRD26Q9UPS8 1709 aa3.07□□□□□ -1.92
PRPF39-207ENST00000554439 PPP1R12BO60237 982 aaPredicted RBP3.07□□□□□ -1.92
PRPF39-207ENST00000554439 MAP4K4O95819 1239 aaPredicted RBP3.07□□□□□ -1.92
PRPF39-207ENST00000554439 MBD3O95983 291 aa3.07□□□□□ -1.92
PRPF39-207ENST00000554439 DMTNQ08495 405 aa3.07□□□□□ -1.92
PRPF39-207ENST00000554439 ALKBH2Q6NS38 261 aa3.07□□□□□ -1.92
PRPF39-207ENST00000554439 G2E3Q7L622 706 aa3.07□□□□□ -1.92
PRPF39-207ENST00000554439 NBPF11Q86T75 865 aa3.07□□□□□ -1.92
PRPF39-207ENST00000554439 SPC24Q8NBT2 197 aa3.07□□□□□ -1.92
PRPF39-207ENST00000554439 ABCF1Q8NE71 845 aaKnown RBP eCLIP3.07□□□□□ -1.92
PRPF39-207ENST00000554439 RNF34Q969K3 372 aa3.07□□□□□ -1.92
PRPF39-207ENST00000554439 KRTAP4-11Q9BYQ6 195 aa3.07□□□□□ -1.92
PRPF39-207ENST00000554439 NIF3L1Q9GZT8 377 aa3.07□□□□□ -1.92
PRPF39-207ENST00000554439 PYCARDQ9ULZ3 195 aa3.07□□□□□ -1.92
PRPF39-207ENST00000554439 RIMS2Q9UQ26 1411 aa3.07□□□□□ -1.92
PRPF39-207ENST00000554439 PTPRMP28827 1452 aa3.07□□□□□ -1.92
PRPF39-207ENST00000554439 MYO5BQ9ULV0 1848 aa3.07□□□□□ -1.92
PRPF39-207ENST00000554439 PNMA6FA0A0J9YX94 578 aa3.06□□□□□ -1.92
PRPF39-207ENST00000554439 GNRH1P01148 92 aa3.06□□□□□ -1.92
PRPF39-207ENST00000554439 IL2RAP01589 272 aa3.06□□□□□ -1.92
PRPF39-207ENST00000554439 CPA1P15085 419 aa3.06□□□□□ -1.92
PRPF39-207ENST00000554439 FSHRP23945 695 aa3.06□□□□□ -1.92
PRPF39-207ENST00000554439 HIRAP54198 1017 aaPredicted RBP3.06□□□□□ -1.92
PRPF39-207ENST00000554439 RACK1P63244 317 aaKnown RBP3.06□□□□□ -1.92
PRPF39-207ENST00000554439 FZD5Q13467 585 aa3.06□□□□□ -1.92
PRPF39-207ENST00000554439 CUL4AQ13619 759 aa3.06□□□□□ -1.92
PRPF39-207ENST00000554439 PIBF1Q8WXW3 757 aa3.06□□□□□ -1.92
PRPF39-207ENST00000554439 DNAJC2Q99543 621 aaKnown RBP3.06□□□□□ -1.92
PRPF39-207ENST00000554439 ESYT1Q9BSJ8 1104 aa3.06□□□□□ -1.92
PRPF39-207ENST00000554439 TANGO6Q9C0B7 1094 aa3.06□□□□□ -1.92
PRPF39-207ENST00000554439 SRCIN1Q9C0H9 1055 aa3.06□□□□□ -1.92
PRPF39-207ENST00000554439 KCNF1Q9H3M0 494 aa3.06□□□□□ -1.92
PRPF39-207ENST00000554439 RPGRIP1LQ68CZ1 1315 aa3.06□□□□□ -1.92
PRPF39-207ENST00000554439 YEATS2Q9ULM3 1422 aa3.06□□□□□ -1.92
PRPF39-207ENST00000554439 KIF20BQ96Q89 1820 aa3.06□□□□□ -1.92
PRPF39-207ENST00000554439 PNMA6EA0A0J9YXQ4 647 aa3.06□□□□□ -1.92
PRPF39-207ENST00000554439 EML1O00423 815 aa3.06□□□□□ -1.92
PRPF39-207ENST00000554439 FIBPO43427 364 aa3.06□□□□□ -1.92
PRPF39-207ENST00000554439 BMP1P13497 986 aa3.06□□□□□ -1.92
PRPF39-207ENST00000554439 U2AF2P26368 475 aaKnown RBP eCLIP3.06□□□□□ -1.921e-6■■■■□ 20.8
PRPF39-207ENST00000554439 PSMD2Q13200 908 aa3.06□□□□□ -1.92
PRPF39-207ENST00000554439 FRMPD1Q5SYB0 1578 aa3.06□□□□□ -1.92
PRPF39-207ENST00000554439 MTERF4Q7Z6M4 381 aaKnown RBP3.06□□□□□ -1.92
PRPF39-207ENST00000554439 LMTK2Q8IWU2 1503 aa3.06□□□□□ -1.92
PRPF39-207ENST00000554439 RPAP2Q8IXW5 612 aaPredicted RBP3.06□□□□□ -1.92
PRPF39-207ENST00000554439 KDF1Q8NAX2 398 aaPredicted RBP3.06□□□□□ -1.92
PRPF39-207ENST00000554439 ZDHHC1Q8WTX9 485 aa3.06□□□□□ -1.92
PRPF39-207ENST00000554439 DHX38Q92620 1227 aaKnown RBP3.06□□□□□ -1.92
PRPF39-207ENST00000554439 RPAP1Q9BWH6 1393 aaPredicted RBP3.06□□□□□ -1.92
PRPF39-207ENST00000554439 RAB6BQ9NRW1 208 aa3.06□□□□□ -1.92
PRPF39-207ENST00000554439 REREQ9P2R6 1566 aa3.06□□□□□ -1.92
PRPF39-207ENST00000554439 VTI1BQ9UEU0 232 aa3.06□□□□□ -1.92
PRPF39-207ENST00000554439 PRKAG2Q9UGJ0 569 aa3.06□□□□□ -1.92
PRPF39-207ENST00000554439 CDC42BPGQ6DT37 1551 aa3.06□□□□□ -1.92
PRPF39-207ENST00000554439 ARAP3Q8WWN8 1544 aa3.06□□□□□ -1.92
PRPF39-207ENST00000554439 UHRF1BP1LA0JNW5 1464 aa3.06□□□□□ -1.92
PRPF39-207ENST00000554439 ZFYVE9O95405 1425 aa3.06□□□□□ -1.92
PRPF39-207ENST00000554439 RAPGEF3O95398 923 aa3.06□□□□□ -1.92
PRPF39-207ENST00000554439 ALDH1A1P00352 501 aa3.06□□□□□ -1.92
PRPF39-207ENST00000554439 PDGFAP04085 211 aa3.06□□□□□ -1.92
PRPF39-207ENST00000554439 FURINP09958 794 aa3.06□□□□□ -1.92
PRPF39-207ENST00000554439 CHMLP26374 656 aa3.06□□□□□ -1.92
PRPF39-207ENST00000554439 GNA15P30679 374 aa3.06□□□□□ -1.92
PRPF39-207ENST00000554439 ZNF76P36508 570 aa3.06□□□□□ -1.92
PRPF39-207ENST00000554439 PSMA6P60900 246 aaKnown RBP3.06□□□□□ -1.92
PRPF39-207ENST00000554439 FGD1P98174 961 aa3.06□□□□□ -1.92
PRPF39-207ENST00000554439 SRSF11Q05519 484 aaKnown RBP3.06□□□□□ -1.92
PRPF39-207ENST00000554439 ZNF394Q53GI3 561 aa3.06□□□□□ -1.92
PRPF39-207ENST00000554439 SULT6B1Q6IMI4 303 aa3.06□□□□□ -1.92
PRPF39-207ENST00000554439 VTI1AQ96AJ9 217 aa3.06□□□□□ -1.92
PRPF39-207ENST00000554439 XAGE2Q96GT9 111 aa3.06□□□□□ -1.92
PRPF39-207ENST00000554439 FMNL2Q96PY5 1086 aa3.06□□□□□ -1.92
PRPF39-207ENST00000554439 IL1RAPL2Q9NP60 686 aa3.06□□□□□ -1.92
PRPF39-207ENST00000554439 CUEDC1Q9NWM3 386 aaPredicted RBP3.06□□□□□ -1.92
PRPF39-207ENST00000554439 CHMP3Q9Y3E7 222 aa3.06□□□□□ -1.92
PRPF39-207ENST00000554439 KIF3AQ9Y496 699 aa3.06□□□□□ -1.92
PRPF39-207ENST00000554439 POGZQ7Z3K3 1410 aa3.05□□□□□ -1.92
PRPF39-207ENST00000554439 CDK2AP1O14519 115 aa3.05□□□□□ -1.92
PRPF39-207ENST00000554439 LARGE1O95461 756 aa3.05□□□□□ -1.92
PRPF39-207ENST00000554439 GTF2F1P35269 517 aaKnown RBP eCLIP3.05□□□□□ -1.92
PRPF39-207ENST00000554439 HMGN5P82970 282 aaKnown RBP3.05□□□□□ -1.92
PRPF39-207ENST00000554439 ORC1Q13415 861 aa3.05□□□□□ -1.92
PRPF39-207ENST00000554439 CCDC183Q5T5S1 534 aa3.05□□□□□ -1.92
PRPF39-207ENST00000554439 ZNF662Q6ZS27 426 aa3.05□□□□□ -1.92
PRPF39-207ENST00000554439 ABTB2Q8N961 1025 aa3.05□□□□□ -1.92
PRPF39-207ENST00000554439 DDX54Q8TDD1 881 aaKnown RBP3.05□□□□□ -1.92
PRPF39-207ENST00000554439 SYAP1Q96A49 352 aaPredicted RBP3.05□□□□□ -1.92
PRPF39-207ENST00000554439 CAPN10Q9HC96 672 aa3.05□□□□□ -1.92
PRPF39-207ENST00000554439 SPTLC3Q9NUV7 552 aa3.05□□□□□ -1.92
PRPF39-207ENST00000554439 NLRP2Q9NX02 1062 aa3.05□□□□□ -1.92
PRPF39-207ENST00000554439 DDX41Q9UJV9 622 aaKnown RBP3.05□□□□□ -1.92
PRPF39-207ENST00000554439 TLL2Q9Y6L7 1015 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms