RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 IARSP41252 1262 aaKnown RBP3.31□□□□□ -1.88
PRPF39-206ENST00000554429 COPS2P61201 443 aa3.31□□□□□ -1.88
PRPF39-206ENST00000554429 NEXNQ0ZGT2 675 aa3.31□□□□□ -1.88
PRPF39-206ENST00000554429 ENOX2Q16206 610 aaKnown RBP3.31□□□□□ -1.88
PRPF39-206ENST00000554429 HSP90AB3PQ58FF7 597 aa3.31□□□□□ -1.88
PRPF39-206ENST00000554429 LCE1DQ5T752 114 aa3.31□□□□□ -1.88
PRPF39-206ENST00000554429 SKAP1Q86WV1 359 aa3.31□□□□□ -1.88
PRPF39-206ENST00000554429 TTC5Q8N0Z6 440 aa3.31□□□□□ -1.88
PRPF39-206ENST00000554429 NGEFQ8N5V2 710 aa3.31□□□□□ -1.88
PRPF39-206ENST00000554429 PBXIP1Q96AQ6 731 aa3.31□□□□□ -1.88
PRPF39-206ENST00000554429 TANGO6Q9C0B7 1094 aa3.31□□□□□ -1.88
PRPF39-206ENST00000554429 NYXQ9GZU5 481 aa3.31□□□□□ -1.88
PRPF39-206ENST00000554429 GOLGA2P5Q9HBQ8 144 aa3.31□□□□□ -1.88
PRPF39-206ENST00000554429 SAGE1Q9NXZ1 904 aa3.31□□□□□ -1.88
PRPF39-206ENST00000554429 DMGDHQ9UI17 866 aaKnown RBP3.31□□□□□ -1.88
PRPF39-206ENST00000554429 DIS3Q9Y2L1 958 aaKnown RBP3.31□□□□□ -1.88
PRPF39-206ENST00000554429 PCDHB3Q9Y5E6 796 aa3.31□□□□□ -1.88
PRPF39-206ENST00000554429 TLL2Q9Y6L7 1015 aa3.31□□□□□ -1.88
PRPF39-206ENST00000554429 PAPPA2Q9BXP8 1791 aa3.31□□□□□ -1.88
PRPF39-206ENST00000554429 DYTNA2CJ06 578 aa3.31□□□□□ -1.88
PRPF39-206ENST00000554429 TCERG1O14776 1098 aaKnown RBP3.31□□□□□ -1.88
PRPF39-206ENST00000554429 ZRANB2O95218 330 aaKnown RBP eCLIP3.31□□□□□ -1.88
PRPF39-206ENST00000554429 ERCC5P28715 1186 aaPredicted RBP3.31□□□□□ -1.88
PRPF39-206ENST00000554429 COPB2P35606 906 aa3.31□□□□□ -1.88
PRPF39-206ENST00000554429 VEGFBP49765 207 aa3.31□□□□□ -1.88
PRPF39-206ENST00000554429 SLC39A6Q13433 755 aa3.31□□□□□ -1.88
PRPF39-206ENST00000554429 HSP90AA2PQ14568 343 aaPredicted RBP3.31□□□□□ -1.88
PRPF39-206ENST00000554429 BMS1Q14692 1282 aaKnown RBP3.31□□□□□ -1.88
PRPF39-206ENST00000554429 TMC4Q7Z404 712 aa3.31□□□□□ -1.88
PRPF39-206ENST00000554429 ENOX1Q8TC92 643 aaKnown RBP3.31□□□□□ -1.88
PRPF39-206ENST00000554429 STAG1Q8WVM7 1258 aa3.31□□□□□ -1.88
PRPF39-206ENST00000554429 TRIM44Q96DX7 344 aaPredicted RBP3.31□□□□□ -1.88
PRPF39-206ENST00000554429 DDX27Q96GQ7 796 aaKnown RBP3.31□□□□□ -1.88
PRPF39-206ENST00000554429 INO80BQ9C086 356 aaPredicted RBP3.31□□□□□ -1.88
PRPF39-206ENST00000554429 IRF2BPLQ9H1B7 796 aa3.31□□□□□ -1.88
PRPF39-206ENST00000554429 VRTNQ9H8Y1 702 aa3.31□□□□□ -1.88
PRPF39-206ENST00000554429 SNRKQ9NRH2 765 aa3.31□□□□□ -1.88
PRPF39-206ENST00000554429 SFMBT1Q9UHJ3 866 aa3.31□□□□□ -1.88
PRPF39-206ENST00000554429 COL4A1P02462 1669 aa3.31□□□□□ -1.88
PRPF39-206ENST00000554429 ZNF541Q9H0D2 1346 aa3.31□□□□□ -1.88
PRPF39-206ENST00000554429 A0A1B0GUL6 1792 aa3.31□□□□□ -1.88
PRPF39-206ENST00000554429 C21orf2O43822 256 aa3.3□□□□□ -1.88
PRPF39-206ENST00000554429 EPHX2P34913 555 aa3.3□□□□□ -1.88
PRPF39-206ENST00000554429 GTF2F1P35269 517 aaKnown RBP eCLIP3.3□□□□□ -1.88
PRPF39-206ENST00000554429 ECE1P42892 770 aa3.3□□□□□ -1.88
PRPF39-206ENST00000554429 HTRA3P83110 453 aa3.3□□□□□ -1.88
PRPF39-206ENST00000554429 PLEKHG6Q3KR16 790 aa3.3□□□□□ -1.88
PRPF39-206ENST00000554429 ICE2Q659A1 982 aa3.3□□□□□ -1.88
PRPF39-206ENST00000554429 TPTE2Q6XPS3 522 aa3.3□□□□□ -1.88
PRPF39-206ENST00000554429 LRP10Q7Z4F1 713 aa3.3□□□□□ -1.88
PRPF39-206ENST00000554429 DZIP3Q86Y13 1208 aaKnown RBP3.3□□□□□ -1.88
PRPF39-206ENST00000554429 ZNF34Q8IZ26 560 aa3.3□□□□□ -1.88
PRPF39-206ENST00000554429 AIDAQ96BJ3 306 aa3.3□□□□□ -1.88
PRPF39-206ENST00000554429 PCMTD1Q96MG8 357 aaPredicted RBP3.3□□□□□ -1.88
PRPF39-206ENST00000554429 MPHOSPH6Q99547 160 aaKnown RBP3.3□□□□□ -1.88
PRPF39-206ENST00000554429 PAGR1Q9BTK6 254 aa3.3□□□□□ -1.88
PRPF39-206ENST00000554429 GDPD2Q9HCC8 539 aa3.3□□□□□ -1.88
PRPF39-206ENST00000554429 WDR33Q9C0J8 1336 aaKnown RBP3.3□□□□□ -1.88
PRPF39-206ENST00000554429 MYH3P11055 1940 aa3.3□□□□□ -1.88
PRPF39-206ENST00000554429 CALD1Q05682 793 aaKnown RBP3.3□□□□□ -1.88
PRPF39-206ENST00000554429 NBPF10Q6P3W6 841 aaKnown RBP3.3□□□□□ -1.88
PRPF39-206ENST00000554429 RPUSD2Q8IZ73 545 aaKnown RBP3.3□□□□□ -1.88
PRPF39-206ENST00000554429 SYNE4Q8N205 404 aa3.3□□□□□ -1.88
PRPF39-206ENST00000554429 NBPF15Q8N660 670 aa3.3□□□□□ -1.88
PRPF39-206ENST00000554429 MYCBPQ99417 103 aaPredicted RBP3.3□□□□□ -1.88
PRPF39-206ENST00000554429 DDX21Q9NR30 783 aaKnown RBP eCLIP3.3□□□□□ -1.882e-13■□□□□ 9.6
PRPF39-206ENST00000554429 USTQ9Y2C2 406 aa3.3□□□□□ -1.88
PRPF39-206ENST00000554429 MAP3K15Q6ZN16 1313 aa3.3□□□□□ -1.88
PRPF39-206ENST00000554429 ABCC12Q96J65 1359 aa3.3□□□□□ -1.88
PRPF39-206ENST00000554429 CACNA1FO60840 1977 aa3.3□□□□□ -1.88
PRPF39-206ENST00000554429 ARAP2Q8WZ64 1704 aa3.3□□□□□ -1.88
PRPF39-206ENST00000554429 PPP1R37O75864 691 aa3.3□□□□□ -1.88
PRPF39-206ENST00000554429 DDNO94850 711 aaPredicted RBP3.3□□□□□ -1.88
PRPF39-206ENST00000554429 PDE4AP27815 886 aa3.3□□□□□ -1.88
PRPF39-206ENST00000554429 TEFQ10587 303 aa3.3□□□□□ -1.88
PRPF39-206ENST00000554429 MTA1Q13330 715 aa3.3□□□□□ -1.88
PRPF39-206ENST00000554429 DEFB115Q30KQ5 88 aa3.3□□□□□ -1.88
PRPF39-206ENST00000554429 PARP10Q53GL7 1025 aa3.3□□□□□ -1.88
PRPF39-206ENST00000554429 NBPF5PQ86XG9 351 aaPredicted RBP3.3□□□□□ -1.88
PRPF39-206ENST00000554429 HSCBQ8IWL3 235 aa3.3□□□□□ -1.88
PRPF39-206ENST00000554429 SUPT20HQ8NEM7 779 aa3.3□□□□□ -1.88
PRPF39-206ENST00000554429 CRISPLD2Q9H0B8 497 aa3.3□□□□□ -1.88
PRPF39-206ENST00000554429 NOP58Q9Y2X3 529 aaKnown RBP3.3□□□□□ -1.88
PRPF39-206ENST00000554429 NTSR2O95665 410 aa3.29□□□□□ -1.88
PRPF39-206ENST00000554429 A1BGP04217 495 aa3.29□□□□□ -1.88
PRPF39-206ENST00000554429 IBSPP21815 317 aaPredicted RBP3.29□□□□□ -1.88
PRPF39-206ENST00000554429 SCNN1DP51172 638 aa3.29□□□□□ -1.88
PRPF39-206ENST00000554429 TAF7Q15545 349 aaPredicted RBP3.29□□□□□ -1.88
PRPF39-206ENST00000554429 ZRSR2Q15696 482 aaKnown RBP3.29□□□□□ -1.88
PRPF39-206ENST00000554429 MAP9Q49MG5 647 aa3.29□□□□□ -1.88
PRPF39-206ENST00000554429 ANKRD23Q86SG2 305 aa3.29□□□□□ -1.88
PRPF39-206ENST00000554429 JAZF1Q86VZ6 243 aa3.29□□□□□ -1.88
PRPF39-206ENST00000554429 CNTROBQ8N137 903 aa3.29□□□□□ -1.88
PRPF39-206ENST00000554429 JDP2Q8WYK2 163 aa3.29□□□□□ -1.88
PRPF39-206ENST00000554429 IL17RAQ96F46 866 aa3.29□□□□□ -1.88
PRPF39-206ENST00000554429 ABHD8Q96I13 439 aa3.29□□□□□ -1.88
PRPF39-206ENST00000554429 RBM17Q96I25 401 aaKnown RBP3.29□□□□□ -1.88
PRPF39-206ENST00000554429 ZNF512BQ96KM6 892 aaPredicted RBP3.29□□□□□ -1.88
PRPF39-206ENST00000554429 PLEKHF1Q96S99 279 aa3.29□□□□□ -1.88
PRPF39-206ENST00000554429 CFHR5Q9BXR6 569 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms