RNA–Protein interactions for RNA: ENST00000554353.1

MTHFD1-206, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-206ENST00000554353 AGMOQ6ZNB7 445 aa7.44□□□□□ -1.22
MTHFD1-206ENST00000554353 GRIN3AQ8TCU5 1115 aa7.44□□□□□ -1.22
MTHFD1-206ENST00000554353 KCNB2Q92953 911 aa7.44□□□□□ -1.22
MTHFD1-206ENST00000554353 TRIM11Q96F44 468 aa7.44□□□□□ -1.22
MTHFD1-206ENST00000554353 CORO1BQ9BR76 489 aa7.44□□□□□ -1.22
MTHFD1-206ENST00000554353 SPON2Q9BUD6 331 aa7.44□□□□□ -1.22
MTHFD1-206ENST00000554353 PLVAPQ9BX97 442 aa7.44□□□□□ -1.22
MTHFD1-206ENST00000554353 ADAMTS1Q9UHI8 967 aa7.44□□□□□ -1.22
MTHFD1-206ENST00000554353 DDX3YO15523 660 aaKnown RBP7.43□□□□□ -1.22
MTHFD1-206ENST00000554353 DEAF1O75398 565 aaPredicted RBP7.43□□□□□ -1.22
MTHFD1-206ENST00000554353 CYP11A1P05108 521 aa7.43□□□□□ -1.22
MTHFD1-206ENST00000554353 MAOBP27338 520 aa7.43□□□□□ -1.22
MTHFD1-206ENST00000554353 RPS26P62854 115 aaKnown RBP7.43□□□□□ -1.22
MTHFD1-206ENST00000554353 RAC1P63000 192 aa7.43□□□□□ -1.22
MTHFD1-206ENST00000554353 CAMK2GQ13555 558 aaPredicted RBP7.43□□□□□ -1.22
MTHFD1-206ENST00000554353 POU4F3Q15319 338 aa7.43□□□□□ -1.22
MTHFD1-206ENST00000554353 LINC00114Q6XXX2 140 aa7.43□□□□□ -1.22
MTHFD1-206ENST00000554353 KIAA0825Q8IV33 1275 aa7.43□□□□□ -1.22
MTHFD1-206ENST00000554353 MAP4K3Q8IVH8 894 aa7.43□□□□□ -1.22
MTHFD1-206ENST00000554353 JARID2Q92833 1246 aaPredicted RBP7.43□□□□□ -1.22
MTHFD1-206ENST00000554353 RHOVQ96L33 236 aa7.43□□□□□ -1.22
MTHFD1-206ENST00000554353 C8orf37Q96NL8 207 aa7.43□□□□□ -1.22
MTHFD1-206ENST00000554353 USP26Q9BXU7 913 aa7.43□□□□□ -1.22
MTHFD1-206ENST00000554353 MKL2Q9ULH7 1088 aa7.43□□□□□ -1.22
MTHFD1-206ENST00000554353 CYP8B1Q9UNU6 501 aa7.43□□□□□ -1.22
MTHFD1-206ENST00000554353 PCDHB5Q9Y5E4 795 aa7.43□□□□□ -1.22
MTHFD1-206ENST00000554353 ATP10BO94823 1461 aa7.43□□□□□ -1.22
MTHFD1-206ENST00000554353 SAMD9Q5K651 1589 aa7.42□□□□□ -1.22
MTHFD1-206ENST00000554353 A0A0A0MRY4 1105 aa7.42□□□□□ -1.22
MTHFD1-206ENST00000554353 FAM229AH3BQW9 127 aa7.42□□□□□ -1.22
MTHFD1-206ENST00000554353 EIF4EBP3O60516 100 aaPredicted RBP7.42□□□□□ -1.22
MTHFD1-206ENST00000554353 ECEL1O95672 775 aa7.42□□□□□ -1.22
MTHFD1-206ENST00000554353 GSTP1P09211 210 aaKnown RBP7.42□□□□□ -1.22
MTHFD1-206ENST00000554353 CD68P34810 354 aaPredicted RBP7.42□□□□□ -1.22
MTHFD1-206ENST00000554353 LMNB2Q03252 620 aa7.42□□□□□ -1.22
MTHFD1-206ENST00000554353 PAK2Q13177 524 aa7.42□□□□□ -1.22
MTHFD1-206ENST00000554353 GNL2Q13823 731 aaKnown RBP7.42□□□□□ -1.22
MTHFD1-206ENST00000554353 SEPT6Q14141 434 aa7.42□□□□□ -1.22
MTHFD1-206ENST00000554353 MAP1SQ66K74 1059 aaPredicted RBP7.42□□□□□ -1.22
MTHFD1-206ENST00000554353 GPAT2Q6NUI2 795 aa7.42□□□□□ -1.22
MTHFD1-206ENST00000554353 DTWD1Q8N5C7 304 aa7.42□□□□□ -1.22
MTHFD1-206ENST00000554353 GOLM1Q8NBJ4 401 aa7.42□□□□□ -1.22
MTHFD1-206ENST00000554353 ZNF296Q8WUU4 475 aaPredicted RBP7.42□□□□□ -1.22
MTHFD1-206ENST00000554353 MIR1-1HGQ9H1L0 117 aa7.42□□□□□ -1.22
MTHFD1-206ENST00000554353 SPDYE3A6NKU9 549 aa7.41□□□□□ -1.22
MTHFD1-206ENST00000554353 RNF225M0QZC1 329 aaPredicted RBP7.41□□□□□ -1.22
MTHFD1-206ENST00000554353 PIK3R2O00459 728 aa7.41□□□□□ -1.22
MTHFD1-206ENST00000554353 GNB5O14775 395 aa7.41□□□□□ -1.22
MTHFD1-206ENST00000554353 TRIM28Q13263 835 aaKnown RBP7.41□□□□□ -1.22
MTHFD1-206ENST00000554353 PDE3AQ14432 1141 aa7.41□□□□□ -1.22
MTHFD1-206ENST00000554353 FBXL19Q6PCT2 694 aa7.41□□□□□ -1.22
MTHFD1-206ENST00000554353 MPRIPQ6WCQ1 1025 aa7.41□□□□□ -1.22
MTHFD1-206ENST00000554353 ILDR2Q71H61 639 aa7.41□□□□□ -1.22
MTHFD1-206ENST00000554353 PODNQ7Z5L7 613 aa7.41□□□□□ -1.22
MTHFD1-206ENST00000554353 PDZD3Q86UT5 571 aa7.41□□□□□ -1.22
MTHFD1-206ENST00000554353 FMR1NBQ8N0W7 255 aaPredicted RBP7.41□□□□□ -1.22
MTHFD1-206ENST00000554353 TINF2Q9BSI4 451 aa7.41□□□□□ -1.22
MTHFD1-206ENST00000554353 KCNK4Q9NYG8 393 aa7.41□□□□□ -1.22
MTHFD1-206ENST00000554353 SUPT16HQ9Y5B9 1047 aaKnown RBP7.41□□□□□ -1.22
MTHFD1-206ENST00000554353 CLIP1P30622 1438 aa7.41□□□□□ -1.22
MTHFD1-206ENST00000554353 RAPGEF6Q8TEU7 1601 aa7.41□□□□□ -1.22
MTHFD1-206ENST00000554353 ADAM11O75078 769 aa7.4□□□□□ -1.22
MTHFD1-206ENST00000554353 ZNF252P-AS1Q0IIN9 211 aa7.4□□□□□ -1.22
MTHFD1-206ENST00000554353 FOXD4L6Q3SYB3 417 aaPredicted RBP7.4□□□□□ -1.22
MTHFD1-206ENST00000554353 LCE3BQ5TA77 95 aa7.4□□□□□ -1.22
MTHFD1-206ENST00000554353 FOXD4L3Q6VB84 417 aaPredicted RBP7.4□□□□□ -1.22
MTHFD1-206ENST00000554353 BNC2Q6ZN30 1099 aaPredicted RBP7.4□□□□□ -1.22
MTHFD1-206ENST00000554353 FBXO11Q86XK2 927 aa7.4□□□□□ -1.22
MTHFD1-206ENST00000554353 ACSBG1Q96GR2 724 aa7.4□□□□□ -1.22
MTHFD1-206ENST00000554353 CHMP4AQ9BY43 222 aa7.4□□□□□ -1.22
MTHFD1-206ENST00000554353 ABCA9Q8IUA7 1624 aa7.4□□□□□ -1.22
MTHFD1-206ENST00000554353 ARAP3Q8WWN8 1544 aa7.39□□□□□ -1.23
MTHFD1-206ENST00000554353 VPS8Q8N3P4 1428 aa7.39□□□□□ -1.23
MTHFD1-206ENST00000554353 CNTNAP5Q8WYK1 1306 aa7.39□□□□□ -1.23
MTHFD1-206ENST00000554353 TM4SF5O14894 197 aa7.39□□□□□ -1.23
MTHFD1-206ENST00000554353 CTSBP07858 339 aa7.39□□□□□ -1.23
MTHFD1-206ENST00000554353 DIEXFQ68CQ4 756 aaKnown RBP7.39□□□□□ -1.23
MTHFD1-206ENST00000554353 TRIM42Q8IWZ5 723 aa7.39□□□□□ -1.23
MTHFD1-206ENST00000554353 DCAF11Q8TEB1 546 aa7.39□□□□□ -1.23
MTHFD1-206ENST00000554353 UBASH3BQ8TF42 649 aa7.39□□□□□ -1.23
MTHFD1-206ENST00000554353 GPRASP2Q96D09 838 aa7.39□□□□□ -1.23
MTHFD1-206ENST00000554353 NRSN2Q9GZP1 204 aa7.39□□□□□ -1.23
MTHFD1-206ENST00000554353 CCDC86Q9H6F5 360 aaKnown RBP7.39□□□□□ -1.23
MTHFD1-206ENST00000554353 HECW2Q9P2P5 1572 aa7.38□□□□□ -1.23
MTHFD1-206ENST00000554353 LOC100289279A0A1B0GTE1 492 aa7.38□□□□□ -1.23
MTHFD1-206ENST00000554353 TLR3O15455 904 aaKnown RBP7.38□□□□□ -1.23
MTHFD1-206ENST00000554353 TRIM37O94972 964 aa7.38□□□□□ -1.23
MTHFD1-206ENST00000554353 F13A1P00488 732 aa7.38□□□□□ -1.23
MTHFD1-206ENST00000554353 GARTP22102 1010 aa7.38□□□□□ -1.23
MTHFD1-206ENST00000554353 DNAJA1P31689 397 aaKnown RBP7.38□□□□□ -1.23
MTHFD1-206ENST00000554353 PTPN11Q06124 597 aaPredicted RBP7.38□□□□□ -1.23
MTHFD1-206ENST00000554353 DUOXA2Q1HG44 320 aa7.38□□□□□ -1.23
MTHFD1-206ENST00000554353 PRRT3Q5FWE3 981 aa7.38□□□□□ -1.23
MTHFD1-206ENST00000554353 VPS37DQ86XT2 251 aa7.38□□□□□ -1.23
MTHFD1-206ENST00000554353 BEND7Q8N7W2 519 aaPredicted RBP7.38□□□□□ -1.23
MTHFD1-206ENST00000554353 GPBAR1Q8TDU6 330 aa7.38□□□□□ -1.23
MTHFD1-206ENST00000554353 EAF1Q96JC9 268 aaPredicted RBP7.38□□□□□ -1.23
MTHFD1-206ENST00000554353 UBP1Q9NZI7 540 aa7.38□□□□□ -1.23
MTHFD1-206ENST00000554353 PCDHA4Q9UN74 947 aa7.38□□□□□ -1.23
MTHFD1-206ENST00000554353 DLL1O00548 723 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms