RNA–Protein interactions for RNA: ENST00000554233.1

IFT43-207, Transcript of intraflagellar transport 43, humanhuman

TSL 3

Gene IFT43, Length 635 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-207ENST00000554233 RGPD1P0DJD0 1748 aa6.44□□□□□ -1.38
IFT43-207ENST00000554233 TNS1Q9HBL0 1735 aaKnown RBP6.44□□□□□ -1.38
IFT43-207ENST00000554233 TTC21BQ7Z4L5 1316 aa6.44□□□□□ -1.38
IFT43-207ENST00000554233 AATKQ6ZMQ8 1374 aa6.44□□□□□ -1.38
IFT43-207ENST00000554233 MAP3K6O95382 1288 aa6.43□□□□□ -1.38
IFT43-207ENST00000554233 PCSK7Q16549 785 aa6.43□□□□□ -1.38
IFT43-207ENST00000554233 CAPN12Q6ZSI9 719 aa6.43□□□□□ -1.38
IFT43-207ENST00000554233 HFE2Q6ZVN8 426 aa6.43□□□□□ -1.38
IFT43-207ENST00000554233 NLRP13Q86W25 1043 aa6.43□□□□□ -1.38
IFT43-207ENST00000554233 SEMA6BQ9H3T3 888 aa6.43□□□□□ -1.38
IFT43-207ENST00000554233 A0A1W2PP64 1363 aa6.43□□□□□ -1.38
IFT43-207ENST00000554233 KTN1Q86UP2 1357 aaKnown RBP6.43□□□□□ -1.38
IFT43-207ENST00000554233 ANKRD36BQ8N2N9 1353 aa6.43□□□□□ -1.38
IFT43-207ENST00000554233 KIAA0232Q92628 1395 aa6.43□□□□□ -1.38
IFT43-207ENST00000554233 COL5A2P05997 1499 aaPredicted RBP6.42□□□□□ -1.38
IFT43-207ENST00000554233 XYLBO75191 536 aa6.42□□□□□ -1.38
IFT43-207ENST00000554233 ATG7O95352 703 aa6.42□□□□□ -1.38
IFT43-207ENST00000554233 GCP02774 474 aa6.42□□□□□ -1.38
IFT43-207ENST00000554233 RAC1P63000 192 aa6.42□□□□□ -1.38
IFT43-207ENST00000554233 PLAURQ03405 335 aa6.42□□□□□ -1.38
IFT43-207ENST00000554233 NAA30Q147X3 362 aaPredicted RBP6.42□□□□□ -1.38
IFT43-207ENST00000554233 PERM1Q5SV97 790 aa6.42□□□□□ -1.38
IFT43-207ENST00000554233 TMEM164Q5U3C3 297 aa6.42□□□□□ -1.38
IFT43-207ENST00000554233 ELMSAN1Q6PJG2 1045 aa6.42□□□□□ -1.38
IFT43-207ENST00000554233 ABTB2Q8N961 1025 aa6.42□□□□□ -1.38
IFT43-207ENST00000554233 TRPM4Q8TD43 1214 aa6.42□□□□□ -1.38
IFT43-207ENST00000554233 LPIN3Q9BQK8 851 aa6.42□□□□□ -1.38
IFT43-207ENST00000554233 TPSG1Q9NRR2 321 aa6.42□□□□□ -1.38
IFT43-207ENST00000554233 CXXC1Q9P0U4 656 aaPredicted RBP6.42□□□□□ -1.38
IFT43-207ENST00000554233 SPATA31A5Q5VU36 1347 aa6.42□□□□□ -1.38
IFT43-207ENST00000554233 SPATA31A7Q8IWB4 1347 aa6.42□□□□□ -1.38
IFT43-207ENST00000554233 SHANK3Q9BYB0 1731 aa6.42□□□□□ -1.38
IFT43-207ENST00000554233 LRRC37A3O60309 1634 aa6.41□□□□□ -1.38
IFT43-207ENST00000554233 SELPP16109 830 aa6.41□□□□□ -1.38
IFT43-207ENST00000554233 BRD2P25440 801 aaKnown RBP6.41□□□□□ -1.38
IFT43-207ENST00000554233 GPLD1P80108 840 aa6.41□□□□□ -1.38
IFT43-207ENST00000554233 FAM26DQ5JW98 314 aa6.41□□□□□ -1.38
IFT43-207ENST00000554233 C16orf46Q6P387 395 aa6.41□□□□□ -1.38
IFT43-207ENST00000554233 SHISA2Q6UWI4 295 aa6.41□□□□□ -1.38
IFT43-207ENST00000554233 ARHGEF25Q86VW2 580 aa6.41□□□□□ -1.38
IFT43-207ENST00000554233 ETFBKMTQ8IXQ9 262 aa6.41□□□□□ -1.38
IFT43-207ENST00000554233 CCDC97Q96F63 343 aaPredicted RBP6.41□□□□□ -1.38
IFT43-207ENST00000554233 SLC12A5Q9H2X9 1139 aa6.41□□□□□ -1.38
IFT43-207ENST00000554233 C11orf16Q9NQ32 467 aa6.41□□□□□ -1.38
IFT43-207ENST00000554233 TERF2IPQ9NYB0 399 aa6.41□□□□□ -1.38
IFT43-207ENST00000554233 VIRMAQ69YN4 1812 aaKnown RBP6.41□□□□□ -1.38
IFT43-207ENST00000554233 C9orf172C9J069 976 aa6.4□□□□□ -1.38
IFT43-207ENST00000554233 ELNP15502 786 aa6.4□□□□□ -1.38
IFT43-207ENST00000554233 ARID4AP29374 1257 aaPredicted RBP6.4□□□□□ -1.38
IFT43-207ENST00000554233 TMF1P82094 1093 aa6.4□□□□□ -1.38
IFT43-207ENST00000554233 GRIK5Q16478 980 aa6.4□□□□□ -1.38
IFT43-207ENST00000554233 MSL1Q68DK7 614 aa6.4□□□□□ -1.38
IFT43-207ENST00000554233 FMR1NBQ8N0W7 255 aaPredicted RBP6.4□□□□□ -1.38
IFT43-207ENST00000554233 KCNH5Q8NCM2 988 aa6.4□□□□□ -1.38
IFT43-207ENST00000554233 TRAIPQ9BWF2 469 aa6.4□□□□□ -1.38
IFT43-207ENST00000554233 SMG9Q9H0W8 520 aaKnown RBP6.4□□□□□ -1.38
IFT43-207ENST00000554233 TLR7Q9NYK1 1049 aaKnown RBP6.4□□□□□ -1.38
IFT43-207ENST00000554233 FRRS1LQ9P0K9 344 aa6.4□□□□□ -1.38
IFT43-207ENST00000554233 KCNMB2Q9Y691 235 aa6.4□□□□□ -1.38
IFT43-207ENST00000554233 SPATA31A1Q5TZJ5 1347 aa6.4□□□□□ -1.39
IFT43-207ENST00000554233 BCL9O00512 1426 aa6.4□□□□□ -1.39
IFT43-207ENST00000554233 SRCAPQ6ZRS2 3230 aa6.4□□□□□ -1.39
IFT43-207ENST00000554233 RREB1Q92766 1687 aa6.39□□□□□ -1.39
IFT43-207ENST00000554233 J3QW42 95 aa6.39□□□□□ -1.39
IFT43-207ENST00000554233 MMP20O60882 483 aa6.39□□□□□ -1.39
IFT43-207ENST00000554233 EGFRP00533 1210 aa6.39□□□□□ -1.39
IFT43-207ENST00000554233 EIF2AK2P19525 551 aaKnown RBP6.39□□□□□ -1.39
IFT43-207ENST00000554233 ITGB7P26010 798 aa6.39□□□□□ -1.39
IFT43-207ENST00000554233 NRLP54845 237 aa6.39□□□□□ -1.39
IFT43-207ENST00000554233 RSPO4Q2I0M5 234 aaPredicted RBP6.39□□□□□ -1.39
IFT43-207ENST00000554233 CCDC82Q8N4S0 544 aa6.39□□□□□ -1.39
IFT43-207ENST00000554233 CCER1Q8TC90 406 aaPredicted RBP6.39□□□□□ -1.39
IFT43-207ENST00000554233 COL26A1Q96A83 441 aa6.39□□□□□ -1.39
IFT43-207ENST00000554233 PBXIP1Q96AQ6 731 aa6.39□□□□□ -1.39
IFT43-207ENST00000554233 NSUN5Q96P11 429 aaKnown RBP6.39□□□□□ -1.39
IFT43-207ENST00000554233 PRDM11Q9NQV5 511 aa6.39□□□□□ -1.39
IFT43-207ENST00000554233 BTG4Q9NY30 223 aa6.39□□□□□ -1.39
IFT43-207ENST00000554233 THRAP3Q9Y2W1 955 aaKnown RBP6.39□□□□□ -1.39
IFT43-207ENST00000554233 KIF24Q5T7B8 1368 aa6.39□□□□□ -1.39
IFT43-207ENST00000554233 DISP2A7MBM2 1401 aa6.39□□□□□ -1.39
IFT43-207ENST00000554233 CRB1P82279 1406 aa6.39□□□□□ -1.39
IFT43-207ENST00000554233 TNFRSF10BO14763 440 aa6.38□□□□□ -1.39
IFT43-207ENST00000554233 PSAPP07602 524 aa6.38□□□□□ -1.39
IFT43-207ENST00000554233 ADGRE1Q14246 886 aa6.38□□□□□ -1.39
IFT43-207ENST00000554233 MBTPS1Q14703 1052 aa6.38□□□□□ -1.39
IFT43-207ENST00000554233 TRIP4Q15650 581 aaPredicted RBP6.38□□□□□ -1.39
IFT43-207ENST00000554233 HDGFL2Q7Z4V5 671 aaPredicted RBP6.38□□□□□ -1.39
IFT43-207ENST00000554233 WFDC8Q8IUA0 241 aa6.38□□□□□ -1.39
IFT43-207ENST00000554233 SERPINA10Q9UK55 444 aa6.38□□□□□ -1.39
IFT43-207ENST00000554233 BLMP54132 1417 aaPredicted RBP6.38□□□□□ -1.39
IFT43-207ENST00000554233 PKD1L3Q7Z443 1732 aa6.38□□□□□ -1.39
IFT43-207ENST00000554233 NCAPD2Q15021 1401 aa6.37□□□□□ -1.39
IFT43-207ENST00000554233 RTL1A6NKG5 1358 aa6.37□□□□□ -1.39
IFT43-207ENST00000554233 WDR17Q8IZU2 1322 aa6.37□□□□□ -1.39
IFT43-207ENST00000554233 LOC102724428A0A0B4J2F2 783 aa6.37□□□□□ -1.39
IFT43-207ENST00000554233 FYB1O15117 783 aa6.37□□□□□ -1.39
IFT43-207ENST00000554233 PTCD1O75127 700 aaKnown RBP6.37□□□□□ -1.39
IFT43-207ENST00000554233 SIK1P57059 783 aa6.37□□□□□ -1.39
IFT43-207ENST00000554233 NKAPLQ5M9Q1 402 aa6.37□□□□□ -1.39
IFT43-207ENST00000554233 XP32Q5T750 250 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms