RNA–Protein interactions for RNA: ENST00000554028.3

TMEM55B-205, humanhuman

TSL 2

Gene TMEM55B, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-205ENST00000554028 C19orf67A6NJJ6 358 aa12.4□□□□□ -0.42
TMEM55B-205ENST00000554028 USP17L12C9JPN9 530 aa12.4□□□□□ -0.42
TMEM55B-205ENST00000554028 USP17L21D6R901 530 aa12.4□□□□□ -0.42
TMEM55B-205ENST00000554028 FOXP2O15409 715 aa12.4□□□□□ -0.42
TMEM55B-205ENST00000554028 PCP11498 1178 aaKnown RBP12.4□□□□□ -0.42
TMEM55B-205ENST00000554028 CASTP20810 708 aaKnown RBP12.4□□□□□ -0.42
TMEM55B-205ENST00000554028 MCM2P49736 904 aa12.4□□□□□ -0.42
TMEM55B-205ENST00000554028 RHBDL3P58872 404 aa12.4□□□□□ -0.42
TMEM55B-205ENST00000554028 HAND2P61296 217 aa12.4□□□□□ -0.42
TMEM55B-205ENST00000554028 SBK1Q52WX2 424 aa12.4□□□□□ -0.42
TMEM55B-205ENST00000554028 APOBEC3HQ6NTF7 200 aaKnown RBP12.4□□□□□ -0.42
TMEM55B-205ENST00000554028 CDC42EP5Q6NZY7 148 aa12.4□□□□□ -0.42
TMEM55B-205ENST00000554028 MFSD6Q6ZSS7 791 aa12.4□□□□□ -0.42
TMEM55B-205ENST00000554028 TTC6Q86TZ1 520 aa12.4□□□□□ -0.42
TMEM55B-205ENST00000554028 MAPKAPK5Q8IW41 473 aa12.4□□□□□ -0.42
TMEM55B-205ENST00000554028 HSCBQ8IWL3 235 aa12.4□□□□□ -0.42
TMEM55B-205ENST00000554028 NCOA7Q8NI08 942 aa12.4□□□□□ -0.42
TMEM55B-205ENST00000554028 KIF2CQ99661 725 aa12.4□□□□□ -0.42
TMEM55B-205ENST00000554028 ZNF287Q9HBT7 754 aa12.4□□□□□ -0.42
TMEM55B-205ENST00000554028 EPB41L4AQ9HCS5 686 aaPredicted RBP12.4□□□□□ -0.42
TMEM55B-205ENST00000554028 MAST2Q6P0Q8 1798 aa12.39□□□□□ -0.43
TMEM55B-205ENST00000554028 SPDYE2BA6NHP3 402 aa12.39□□□□□ -0.43
TMEM55B-205ENST00000554028 E7EWF7 191 aa12.39□□□□□ -0.43
TMEM55B-205ENST00000554028 SPDYE6P0CI01 402 aa12.39□□□□□ -0.43
TMEM55B-205ENST00000554028 GMPSP49915 693 aaPredicted RBP12.39□□□□□ -0.43
TMEM55B-205ENST00000554028 PRELPP51888 382 aa12.39□□□□□ -0.43
TMEM55B-205ENST00000554028 FGD1P98174 961 aa12.39□□□□□ -0.43
TMEM55B-205ENST00000554028 PPARAQ07869 468 aa12.39□□□□□ -0.43
TMEM55B-205ENST00000554028 SPDYE2Q495Y8 402 aa12.39□□□□□ -0.43
TMEM55B-205ENST00000554028 CTR9Q6PD62 1173 aa12.39□□□□□ -0.43
TMEM55B-205ENST00000554028 RUFY3Q7L099 469 aa12.39□□□□□ -0.43
TMEM55B-205ENST00000554028 MTMR14Q8NCE2 650 aa12.39□□□□□ -0.43
TMEM55B-205ENST00000554028 KRT23Q9C075 422 aa12.39□□□□□ -0.43
TMEM55B-205ENST00000554028 ZSWIM6Q9HCJ5 1215 aa12.39□□□□□ -0.43
TMEM55B-205ENST00000554028 TOMM22Q9NS69 142 aa12.39□□□□□ -0.43
TMEM55B-205ENST00000554028 PDRG1Q9NUG6 133 aa12.39□□□□□ -0.43
TMEM55B-205ENST00000554028 CNOT7Q9UIV1 285 aaKnown RBP12.39□□□□□ -0.43
TMEM55B-205ENST00000554028 ANAPC4Q9UJX5 808 aa12.39□□□□□ -0.43
TMEM55B-205ENST00000554028 MYH7P12883 1935 aa12.39□□□□□ -0.43
TMEM55B-205ENST00000554028 CCDC88AQ3V6T2 1871 aa12.38□□□□□ -0.43
TMEM55B-205ENST00000554028 LMOD1P29536 600 aaPredicted RBP12.38□□□□□ -0.43
TMEM55B-205ENST00000554028 NT5C2P49902 561 aa12.38□□□□□ -0.43
TMEM55B-205ENST00000554028 ZNF280AP59817 542 aaPredicted RBP12.38□□□□□ -0.43
TMEM55B-205ENST00000554028 PDE4BQ07343 736 aa12.38□□□□□ -0.43
TMEM55B-205ENST00000554028 PICALMQ13492 652 aa12.38□□□□□ -0.43
TMEM55B-205ENST00000554028 ANKRD1Q15327 319 aa12.38□□□□□ -0.43
TMEM55B-205ENST00000554028 AKNAD1Q5T1N1 836 aa12.38□□□□□ -0.43
TMEM55B-205ENST00000554028 SNX21Q969T3 373 aa12.38□□□□□ -0.43
TMEM55B-205ENST00000554028 PRMT6Q96LA8 375 aaPredicted RBP12.38□□□□□ -0.43
TMEM55B-205ENST00000554028 UPF3BQ9BZI7 483 aaKnown RBP12.38□□□□□ -0.43
TMEM55B-205ENST00000554028 TDRD3Q9H7E2 651 aaKnown RBP12.38□□□□□ -0.43
TMEM55B-205ENST00000554028 MYOZ2Q9NPC6 264 aa12.38□□□□□ -0.43
TMEM55B-205ENST00000554028 COL4A5P29400 1685 aa12.38□□□□□ -0.43
TMEM55B-205ENST00000554028 ZNF541Q9H0D2 1346 aa12.37□□□□□ -0.43
TMEM55B-205ENST00000554028 HLA-DOAP06340 250 aa12.37□□□□□ -0.43
TMEM55B-205ENST00000554028 RPS6KB1P23443 525 aa12.37□□□□□ -0.43
TMEM55B-205ENST00000554028 MCM5P33992 734 aa12.37□□□□□ -0.43
TMEM55B-205ENST00000554028 CTDSPL2Q05D32 466 aa12.37□□□□□ -0.43
TMEM55B-205ENST00000554028 ADCK5Q3MIX3 580 aa12.37□□□□□ -0.43
TMEM55B-205ENST00000554028 RBM26Q5T8P6 1007 aaKnown RBP12.37□□□□□ -0.43
TMEM55B-205ENST00000554028 C12orf60Q5U649 245 aa12.37□□□□□ -0.43
TMEM55B-205ENST00000554028 DHX32Q7L7V1 743 aaKnown RBP12.37□□□□□ -0.43
TMEM55B-205ENST00000554028 ZSCAN29Q8IWY8 852 aaPredicted RBP12.37□□□□□ -0.43
TMEM55B-205ENST00000554028 MICALL2Q8IY33 904 aa12.37□□□□□ -0.43
TMEM55B-205ENST00000554028 STAG1Q8WVM7 1258 aa12.37□□□□□ -0.43
TMEM55B-205ENST00000554028 IPO9Q96P70 1041 aaKnown RBP12.37□□□□□ -0.43
TMEM55B-205ENST00000554028 IDI2Q9BXS1 227 aa12.37□□□□□ -0.43
TMEM55B-205ENST00000554028 DHX36Q9H2U1 1008 aaKnown RBP12.37□□□□□ -0.43
TMEM55B-205ENST00000554028 SAP30BPQ9UHR5 308 aaKnown RBP12.37□□□□□ -0.43
TMEM55B-205ENST00000554028 FLT1P17948 1338 aa12.37□□□□□ -0.43
TMEM55B-205ENST00000554028 ZC3H4Q9UPT8 1303 aaKnown RBP12.37□□□□□ -0.43
TMEM55B-205ENST00000554028 ENTPD3O75355 529 aa12.36□□□□□ -0.43
TMEM55B-205ENST00000554028 WDHD1O75717 1129 aaPredicted RBP12.36□□□□□ -0.43
TMEM55B-205ENST00000554028 GABBR2O75899 941 aa12.36□□□□□ -0.43
TMEM55B-205ENST00000554028 TNNI2P48788 182 aa12.36□□□□□ -0.43
TMEM55B-205ENST00000554028 SART3Q15020 963 aaKnown RBP12.36□□□□□ -0.43
TMEM55B-205ENST00000554028 RRP12Q5JTH9 1297 aaKnown RBP12.36□□□□□ -0.43
TMEM55B-205ENST00000554028 ESR2Q92731 530 aa12.36□□□□□ -0.43
TMEM55B-205ENST00000554028 TRIM34Q9BYJ4 488 aa12.36□□□□□ -0.43
TMEM55B-205ENST00000554028 MKNK2Q9HBH9 465 aa12.36□□□□□ -0.43
TMEM55B-205ENST00000554028 ZNF70Q9UC06 446 aaPredicted RBP12.36□□□□□ -0.43
TMEM55B-205ENST00000554028 MKRN1Q9UHC7 482 aaKnown RBP12.36□□□□□ -0.43
TMEM55B-205ENST00000554028 TAOK2Q9UL54 1235 aa12.36□□□□□ -0.43
TMEM55B-205ENST00000554028 CHD4Q14839 1912 aa12.36□□□□□ -0.43
TMEM55B-205ENST00000554028 MYO5AQ9Y4I1 1855 aaKnown RBP12.36□□□□□ -0.43
TMEM55B-205ENST00000554028 ERICH2A1L162 156 aa12.35□□□□□ -0.43
TMEM55B-205ENST00000554028 HSP90AA1P07900 732 aaKnown RBP12.35□□□□□ -0.43
TMEM55B-205ENST00000554028 TNFAIP1Q13829 316 aa12.35□□□□□ -0.43
TMEM55B-205ENST00000554028 FKBP1CQ5VVH2 108 aa12.35□□□□□ -0.43
TMEM55B-205ENST00000554028 ZNF444Q8N0Y2 327 aaPredicted RBP12.35□□□□□ -0.43
TMEM55B-205ENST00000554028 STK11IPQ8N1F8 1099 aa12.35□□□□□ -0.43
TMEM55B-205ENST00000554028 OSBPL5Q9H0X9 879 aaPredicted RBP12.35□□□□□ -0.43
TMEM55B-205ENST00000554028 VEZTQ9HBM0 779 aa12.35□□□□□ -0.43
TMEM55B-205ENST00000554028 GPRC5DQ9NZD1 345 aa12.35□□□□□ -0.43
TMEM55B-205ENST00000554028 CLEC11AQ9Y240 323 aa12.35□□□□□ -0.43
TMEM55B-205ENST00000554028 CYP2D7A0A087X1C5 515 aa12.34□□□□□ -0.43
TMEM55B-205ENST00000554028 K7ELQ4 463 aaPredicted RBP12.34□□□□□ -0.43
TMEM55B-205ENST00000554028 WNT10BO00744 389 aa12.34□□□□□ -0.43
TMEM55B-205ENST00000554028 DDNO94850 711 aaPredicted RBP12.34□□□□□ -0.43
TMEM55B-205ENST00000554028 TCP10Q12799 353 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms