RNA–Protein interactions for RNA: ENST00000553888.5

VIPAS39-206, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VIPAS39, Length 2,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-206ENST00000553888 H3BQV1 296 aa14.96□□□□□ -0.01
VIPAS39-206ENST00000553888 IFIT3O14879 490 aaKnown RBP14.96□□□□□ -0.01
VIPAS39-206ENST00000553888 LDHBP07195 334 aaKnown RBP14.96□□□□□ -0.01
VIPAS39-206ENST00000553888 CDC27P30260 824 aa14.96□□□□□ -0.01
VIPAS39-206ENST00000553888 IFFO2Q5TF58 517 aa14.96□□□□□ -0.01
VIPAS39-206ENST00000553888 CTR9Q6PD62 1173 aa14.96□□□□□ -0.01
VIPAS39-206ENST00000553888 DEFB132Q7Z7B7 95 aa14.96□□□□□ -0.01
VIPAS39-206ENST00000553888 CAMKK2Q96RR4 588 aa14.96□□□□□ -0.01
VIPAS39-206ENST00000553888 LLPHQ9BRT6 129 aaKnown RBP14.96□□□□□ -0.01
VIPAS39-206ENST00000553888 CDK5RAP2Q96SN8 1893 aa14.96□□□□□ -0.02
VIPAS39-206ENST00000553888 GOLGA6L3A6NEY3 463 aa14.96□□□□□ -0.02
VIPAS39-206ENST00000553888 ZSCAN23Q3MJ62 389 aa14.96□□□□□ -0.02
VIPAS39-206ENST00000553888 APOA5Q6Q788 366 aa14.96□□□□□ -0.02
VIPAS39-206ENST00000553888 NFXL1Q6ZNB6 911 aa14.96□□□□□ -0.02
VIPAS39-206ENST00000553888 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.96□□□□□ -0.02
VIPAS39-206ENST00000553888 ZNF622Q969S3 477 aaKnown RBP eCLIP14.96□□□□□ -0.02
VIPAS39-206ENST00000553888 DUOX1Q9NRD9 1551 aa14.95□□□□□ -0.02
VIPAS39-206ENST00000553888 AIFM3Q96NN9 605 aa14.95□□□□□ -0.02
VIPAS39-206ENST00000553888 LAMB1P07942 1786 aa14.95□□□□□ -0.02
VIPAS39-206ENST00000553888 WDR19Q8NEZ3 1342 aa14.95□□□□□ -0.02
VIPAS39-206ENST00000553888 SLC15A2Q16348 729 aa14.95□□□□□ -0.02
VIPAS39-206ENST00000553888 SH3RF3Q8TEJ3 882 aaPredicted RBP14.95□□□□□ -0.02
VIPAS39-206ENST00000553888 NAP1L5Q96NT1 182 aaPredicted RBP14.95□□□□□ -0.02
VIPAS39-206ENST00000553888 PANK2Q9BZ23 570 aa14.95□□□□□ -0.02
VIPAS39-206ENST00000553888 DCP1AQ9NPI6 582 aaPredicted RBP14.95□□□□□ -0.02
VIPAS39-206ENST00000553888 SLX4Q8IY92 1834 aa14.95□□□□□ -0.02
VIPAS39-206ENST00000553888 KIAA1551Q9HCM1 1747 aa14.95□□□□□ -0.02
VIPAS39-206ENST00000553888 RGPD3A6NKT7 1758 aaPredicted RBP14.94□□□□□ -0.02
VIPAS39-206ENST00000553888 RGPD4Q7Z3J3 1758 aa14.94□□□□□ -0.02
VIPAS39-206ENST00000553888 CHRNA5P30532 468 aa14.94□□□□□ -0.02
VIPAS39-206ENST00000553888 RESTQ13127 1097 aa14.94□□□□□ -0.02
VIPAS39-206ENST00000553888 WDR66Q8TBY9 1149 aa14.94□□□□□ -0.02
VIPAS39-206ENST00000553888 MXD3Q9BW11 206 aa14.94□□□□□ -0.02
VIPAS39-206ENST00000553888 FTOQ9C0B1 505 aaKnown RBP eCLIP14.94□□□□□ -0.02
VIPAS39-206ENST00000553888 ATP6V0A2Q9Y487 856 aa14.94□□□□□ -0.02
VIPAS39-206ENST00000553888 USP17L8P0C7I0 530 aa14.94□□□□□ -0.02
VIPAS39-206ENST00000553888 METAP2P50579 478 aaKnown RBP eCLIP14.94□□□□□ -0.02
VIPAS39-206ENST00000553888 C15orf52Q6ZUT6 534 aaKnown RBP14.94□□□□□ -0.02
VIPAS39-206ENST00000553888 TTC6Q86TZ1 520 aa14.94□□□□□ -0.02
VIPAS39-206ENST00000553888 SP8Q8IXZ3 490 aa14.94□□□□□ -0.02
VIPAS39-206ENST00000553888 FLAD1Q8NFF5 587 aa14.94□□□□□ -0.02
VIPAS39-206ENST00000553888 PHKBQ93100 1093 aa14.94□□□□□ -0.02
VIPAS39-206ENST00000553888 FBXW7Q969H0 707 aa14.94□□□□□ -0.02
VIPAS39-206ENST00000553888 KRT23Q9C075 422 aa14.94□□□□□ -0.02
VIPAS39-206ENST00000553888 NPR1P16066 1061 aa14.93□□□□□ -0.02
VIPAS39-206ENST00000553888 DOK7Q18PE1 504 aa14.93□□□□□ -0.02
VIPAS39-206ENST00000553888 ATP6V1DQ9Y5K8 247 aa14.93□□□□□ -0.02
VIPAS39-206ENST00000553888 UTRNP46939 3433 aa14.93□□□□□ -0.02
VIPAS39-206ENST00000553888 CPLX1O14810 134 aa14.93□□□□□ -0.02
VIPAS39-206ENST00000553888 XRCC6P12956 609 aaKnown RBP eCLIP14.93□□□□□ -0.02
VIPAS39-206ENST00000553888 IL1R1P14778 569 aa14.93□□□□□ -0.02
VIPAS39-206ENST00000553888 CEBPZQ03701 1054 aaKnown RBP14.93□□□□□ -0.02
VIPAS39-206ENST00000553888 CMTR1Q8N1G2 835 aaKnown RBP14.93□□□□□ -0.02
VIPAS39-206ENST00000553888 TMEM87BQ96K49 555 aa14.93□□□□□ -0.02
VIPAS39-206ENST00000553888 CRNKL1Q9BZJ0 848 aaKnown RBP14.93□□□□□ -0.02
VIPAS39-206ENST00000553888 CNNM2Q9H8M5 875 aa14.93□□□□□ -0.02
VIPAS39-206ENST00000553888 GTF2IP78347 998 aa14.93□□□□□ -0.02
VIPAS39-206ENST00000553888 HMGN5P82970 282 aaKnown RBP14.93□□□□□ -0.02
VIPAS39-206ENST00000553888 MFSD14BQ5SR56 506 aa14.93□□□□□ -0.02
VIPAS39-206ENST00000553888 SPTY2D1Q68D10 685 aaPredicted RBP14.93□□□□□ -0.02
VIPAS39-206ENST00000553888 TMEM87AQ8NBN3 555 aa14.93□□□□□ -0.02
VIPAS39-206ENST00000553888 FAM217BQ9NTX9 383 aaPredicted RBP14.93□□□□□ -0.02
VIPAS39-206ENST00000553888 ORC3Q9UBD5 711 aaPredicted RBP14.93□□□□□ -0.02
VIPAS39-206ENST00000553888 ADAMTSL1Q8N6G6 1762 aa14.92□□□□□ -0.02
VIPAS39-206ENST00000553888 SYCE3A1L190 88 aa14.92□□□□□ -0.02
VIPAS39-206ENST00000553888 ZBTB43O43298 467 aa14.92□□□□□ -0.02
VIPAS39-206ENST00000553888 RANBP6O60518 1105 aaKnown RBP14.92□□□□□ -0.02
VIPAS39-206ENST00000553888 NMT2O60551 498 aa14.92□□□□□ -0.02
VIPAS39-206ENST00000553888 CDK11BP21127 795 aaKnown RBP14.92□□□□□ -0.02
VIPAS39-206ENST00000553888 C2CD5Q86YS7 1000 aa14.92□□□□□ -0.02
VIPAS39-206ENST00000553888 F8W031 263 aaPredicted RBP14.92□□□□□ -0.02
VIPAS39-206ENST00000553888 PDE6BP35913 854 aa14.92□□□□□ -0.02
VIPAS39-206ENST00000553888 CCDC82Q8N4S0 544 aa14.92□□□□□ -0.02
VIPAS39-206ENST00000553888 ANAPC4Q9UJX5 808 aa14.92□□□□□ -0.02
VIPAS39-206ENST00000553888 BAZ2BQ9UIF8 2168 aaKnown RBP14.91□□□□□ -0.02
VIPAS39-206ENST00000553888 GOLGA8AA7E2F4 631 aa14.91□□□□□ -0.02
VIPAS39-206ENST00000553888 FAM47AQ5JRC9 791 aa14.91□□□□□ -0.02
VIPAS39-206ENST00000553888 MPNDQ8N594 471 aa14.91□□□□□ -0.02
VIPAS39-206ENST00000553888 MCM9Q9NXL9 1143 aa14.91□□□□□ -0.02
VIPAS39-206ENST00000553888 NAV1Q8NEY1 1877 aa14.91□□□□□ -0.02
VIPAS39-206ENST00000553888 CCDC69A6NI79 296 aa14.91□□□□□ -0.02
VIPAS39-206ENST00000553888 WTAPQ15007 396 aa14.91□□□□□ -0.02
VIPAS39-206ENST00000553888 ILDR1Q86SU0 546 aaPredicted RBP14.91□□□□□ -0.02
VIPAS39-206ENST00000553888 TGFBRAP1Q8WUH2 860 aa14.91□□□□□ -0.02
VIPAS39-206ENST00000553888 MASTLQ96GX5 879 aa14.91□□□□□ -0.02
VIPAS39-206ENST00000553888 KCNQ5Q9NR82 932 aa14.91□□□□□ -0.02
VIPAS39-206ENST00000553888 SAP30BPQ9UHR5 308 aaKnown RBP14.91□□□□□ -0.02
VIPAS39-206ENST00000553888 SLC12A7Q9Y666 1083 aa14.91□□□□□ -0.02
VIPAS39-206ENST00000553888 MBD3O95983 291 aa14.9□□□□□ -0.02
VIPAS39-206ENST00000553888 KRT85P78386 507 aa14.9□□□□□ -0.02
VIPAS39-206ENST00000553888 DPP8Q6V1X1 898 aaPredicted RBP14.9□□□□□ -0.02
VIPAS39-206ENST00000553888 SGMS1Q86VZ5 419 aa14.9□□□□□ -0.02
VIPAS39-206ENST00000553888 DYNLL2Q96FJ2 89 aa14.9□□□□□ -0.02
VIPAS39-206ENST00000553888 RTFDC1Q9BY42 306 aaPredicted RBP14.9□□□□□ -0.02
VIPAS39-206ENST00000553888 RNF41Q9H4P4 317 aaPredicted RBP14.9□□□□□ -0.02
VIPAS39-206ENST00000553888 STK32BQ9NY57 414 aa14.9□□□□□ -0.02
VIPAS39-206ENST00000553888 TNKSO95271 1327 aa14.9□□□□□ -0.02
VIPAS39-206ENST00000553888 USP5P45974 858 aa14.9□□□□□ -0.02
VIPAS39-206ENST00000553888 MAPKAPK5Q8IW41 473 aa14.9□□□□□ -0.02
VIPAS39-206ENST00000553888 NUP133Q8WUM0 1156 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms