RNA–Protein interactions for RNA: ENST00000553882.1

ACTN1-211, Transcript of actinin alpha 1, humanhuman

TSL 2

Gene ACTN1, Length 2,636 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-211ENST00000553882 NCBP1Q09161 790 aaKnown RBP16.83■□□□□ 0.29
ACTN1-211ENST00000553882 LCORLQ8N3X6 602 aa16.83■□□□□ 0.29
ACTN1-211ENST00000553882 PRDM10Q9NQV6 1147 aa16.83■□□□□ 0.29
ACTN1-211ENST00000553882 GSG1L2A8MUP6 293 aa16.83■□□□□ 0.28
ACTN1-211ENST00000553882 NCAPHQ15003 741 aa16.83■□□□□ 0.28
ACTN1-211ENST00000553882 PTPN14Q15678 1187 aa16.83■□□□□ 0.28
ACTN1-211ENST00000553882 SGMS1Q86VZ5 419 aa16.83■□□□□ 0.28
ACTN1-211ENST00000553882 MAP3K14Q99558 947 aa16.83■□□□□ 0.28
ACTN1-211ENST00000553882 AKNAD1Q5T1N1 836 aa16.83■□□□□ 0.28
ACTN1-211ENST00000553882 MFSD6Q6ZSS7 791 aa16.83■□□□□ 0.28
ACTN1-211ENST00000553882 PAXBP1Q9Y5B6 917 aa16.83■□□□□ 0.28
ACTN1-211ENST00000553882 ANKRD36CQ5JPF3 1778 aa16.82■□□□□ 0.28
ACTN1-211ENST00000553882 CBX1P83916 185 aa16.82■□□□□ 0.28
ACTN1-211ENST00000553882 SSRP1Q08945 709 aaKnown RBP16.82■□□□□ 0.28
ACTN1-211ENST00000553882 ANKRD7Q92527 254 aa16.82■□□□□ 0.28
ACTN1-211ENST00000553882 BPIFA3Q9BQP9 254 aa16.82■□□□□ 0.28
ACTN1-211ENST00000553882 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.82■□□□□ 0.28
ACTN1-211ENST00000553882 KCNJ14Q9UNX9 436 aa16.82■□□□□ 0.28
ACTN1-211ENST00000553882 SLC4A4Q9Y6R1 1079 aa16.82■□□□□ 0.28
ACTN1-211ENST00000553882 SPDYE4A6NLX3 237 aa16.82■□□□□ 0.28
ACTN1-211ENST00000553882 BTBD18B2RXH4 712 aa16.82■□□□□ 0.28
ACTN1-211ENST00000553882 U2AF2P26368 475 aaKnown RBP eCLIP16.82■□□□□ 0.281e-13■■■□□ 15
ACTN1-211ENST00000553882 ARMCX5Q6P1M9 558 aa16.82■□□□□ 0.28
ACTN1-211ENST00000553882 HOMEZQ8IX15 550 aa16.82■□□□□ 0.28
ACTN1-211ENST00000553882 CCAR2Q8N163 923 aaKnown RBP16.82■□□□□ 0.28
ACTN1-211ENST00000553882 JMYQ8N9B5 988 aa16.82■□□□□ 0.28
ACTN1-211ENST00000553882 ACSBG1Q96GR2 724 aa16.82■□□□□ 0.28
ACTN1-211ENST00000553882 PPP6R2O75170 966 aa16.81■□□□□ 0.28
ACTN1-211ENST00000553882 PTPN21Q16825 1174 aa16.81■□□□□ 0.28
ACTN1-211ENST00000553882 NYAP1Q6ZVC0 841 aa16.81■□□□□ 0.28
ACTN1-211ENST00000553882 HPSEQ9Y251 543 aa16.81■□□□□ 0.28
ACTN1-211ENST00000553882 LIFRP42702 1097 aa16.81■□□□□ 0.28
ACTN1-211ENST00000553882 GSDMDP57764 484 aa16.81■□□□□ 0.28
ACTN1-211ENST00000553882 TPM4P67936 248 aa16.81■□□□□ 0.28
ACTN1-211ENST00000553882 ALX1Q15699 326 aa16.81■□□□□ 0.28
ACTN1-211ENST00000553882 LONRF3Q496Y0 759 aa16.81■□□□□ 0.28
ACTN1-211ENST00000553882 OSBPL5Q9H0X9 879 aaPredicted RBP16.81■□□□□ 0.28
ACTN1-211ENST00000553882 LRP2BPQ9P2M1 347 aa16.81■□□□□ 0.28
ACTN1-211ENST00000553882 SMIM22K7EJ46 135 aa16.8■□□□□ 0.28
ACTN1-211ENST00000553882 NUP133Q8WUM0 1156 aa16.8■□□□□ 0.28
ACTN1-211ENST00000553882 DISP2A7MBM2 1401 aa16.8■□□□□ 0.28
ACTN1-211ENST00000553882 FOXN1O15353 648 aa16.8■□□□□ 0.28
ACTN1-211ENST00000553882 ATP2B1P20020 1258 aa16.8■□□□□ 0.28
ACTN1-211ENST00000553882 EIF5P55010 431 aaKnown RBP16.8■□□□□ 0.28
ACTN1-211ENST00000553882 FANCCQ00597 558 aa16.8■□□□□ 0.28
ACTN1-211ENST00000553882 HSP90AA4PQ58FG1 418 aa16.8■□□□□ 0.28
ACTN1-211ENST00000553882 RESP18Q5W5W9 173 aa16.8■□□□□ 0.28
ACTN1-211ENST00000553882 UTP14AQ9BVJ6 771 aaKnown RBP16.8■□□□□ 0.28
ACTN1-211ENST00000553882 HSD3B7Q9H2F3 369 aa16.8■□□□□ 0.28
ACTN1-211ENST00000553882 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.8■□□□□ 0.28
ACTN1-211ENST00000553882 V9GYY5 206 aaPredicted RBP16.8■□□□□ 0.28
ACTN1-211ENST00000553882 SFPQP23246 707 aaKnown RBP eCLIP16.79■□□□□ 0.28
ACTN1-211ENST00000553882 ATP6V1AP38606 617 aa16.79■□□□□ 0.28
ACTN1-211ENST00000553882 CRKLP46109 303 aaKnown RBP16.79■□□□□ 0.28
ACTN1-211ENST00000553882 GRIN1Q05586 938 aa16.79■□□□□ 0.28
ACTN1-211ENST00000553882 METTL16Q86W50 562 aaKnown RBP16.79■□□□□ 0.28
ACTN1-211ENST00000553882 NOSTRINQ8IVI9 506 aa16.79■□□□□ 0.28
ACTN1-211ENST00000553882 DIS3L2Q8IYB7 885 aaKnown RBP16.79■□□□□ 0.28
ACTN1-211ENST00000553882 CNNM3Q8NE01 707 aa16.79■□□□□ 0.28
ACTN1-211ENST00000553882 SDR42E1Q8WUS8 393 aa16.79■□□□□ 0.28
ACTN1-211ENST00000553882 CNNM2Q9H8M5 875 aa16.79■□□□□ 0.28
ACTN1-211ENST00000553882 ABCF2Q9UG63 623 aa16.79■□□□□ 0.28
ACTN1-211ENST00000553882 KCNH3Q9ULD8 1083 aa16.79■□□□□ 0.28
ACTN1-211ENST00000553882 WTIPA6NIX2 430 aaPredicted RBP16.79■□□□□ 0.28
ACTN1-211ENST00000553882 FMNL1O95466 1100 aaPredicted RBP16.79■□□□□ 0.28
ACTN1-211ENST00000553882 WTAPQ15007 396 aa16.79■□□□□ 0.28
ACTN1-211ENST00000553882 RTN1Q16799 776 aa16.79■□□□□ 0.28
ACTN1-211ENST00000553882 INTS5Q6P9B9 1019 aaKnown RBP16.79■□□□□ 0.28
ACTN1-211ENST00000553882 FOXP4Q8IVH2 680 aaPredicted RBP16.79■□□□□ 0.28
ACTN1-211ENST00000553882 TIGD1Q96MW7 591 aa16.79■□□□□ 0.28
ACTN1-211ENST00000553882 NACAP1Q9BZK3 213 aa16.79■□□□□ 0.28
ACTN1-211ENST00000553882 KRT23Q9C075 422 aa16.79■□□□□ 0.28
ACTN1-211ENST00000553882 IMPACTQ9P2X3 320 aa16.79■□□□□ 0.28
ACTN1-211ENST00000553882 TUBE1Q9UJT0 475 aa16.79■□□□□ 0.28
ACTN1-211ENST00000553882 ECM29Q5VYK3 1845 aa16.78■□□□□ 0.28
ACTN1-211ENST00000553882 IGHMBP2P38935 993 aaKnown RBP16.78■□□□□ 0.28
ACTN1-211ENST00000553882 NR5A1Q13285 461 aa16.78■□□□□ 0.28
ACTN1-211ENST00000553882 E4F1Q66K89 784 aaPredicted RBP16.78■□□□□ 0.28
ACTN1-211ENST00000553882 NIP7Q9Y221 180 aaKnown RBP eCLIP16.78■□□□□ 0.28
ACTN1-211ENST00000553882 STRCQ7RTU9 1775 aa16.78■□□□□ 0.28
ACTN1-211ENST00000553882 MINDY4BA8MYZ0 360 aa16.78■□□□□ 0.28
ACTN1-211ENST00000553882 SERPINC1P01008 464 aa16.78■□□□□ 0.28
ACTN1-211ENST00000553882 IFNAR1P17181 557 aa16.78■□□□□ 0.28
ACTN1-211ENST00000553882 SART3Q15020 963 aaKnown RBP16.78■□□□□ 0.28
ACTN1-211ENST00000553882 CCDC152Q4G0S7 254 aa16.78■□□□□ 0.28
ACTN1-211ENST00000553882 ADGRA1Q86SQ6 560 aa16.78■□□□□ 0.28
ACTN1-211ENST00000553882 DPF2Q92785 391 aa16.78■□□□□ 0.28
ACTN1-211ENST00000553882 CCDC87Q9NVE4 849 aa16.78■□□□□ 0.28
ACTN1-211ENST00000553882 PCDHA5Q9Y5H7 936 aa16.78■□□□□ 0.28
ACTN1-211ENST00000553882 MMP1P03956 469 aa16.77■□□□□ 0.28
ACTN1-211ENST00000553882 TOB1P50616 345 aaPredicted RBP16.77■□□□□ 0.28
ACTN1-211ENST00000553882 CHRNDQ07001 517 aa16.77■□□□□ 0.28
ACTN1-211ENST00000553882 TRIM22Q8IYM9 498 aa16.77■□□□□ 0.28
ACTN1-211ENST00000553882 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.77■□□□□ 0.28
ACTN1-211ENST00000553882 CHD4Q14839 1912 aa16.77■□□□□ 0.27
ACTN1-211ENST00000553882 ERICH2A1L162 156 aa16.77■□□□□ 0.27
ACTN1-211ENST00000553882 CUTAO60888 179 aa16.77■□□□□ 0.27
ACTN1-211ENST00000553882 SAFBQ15424 915 aaKnown RBP eCLIP16.77■□□□□ 0.27
ACTN1-211ENST00000553882 CFAP100Q494V2 611 aa16.77■□□□□ 0.27
ACTN1-211ENST00000553882 KRBA2Q6ZNG9 492 aa16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms