RNA–Protein interactions for RNA: ENST00000553871.5

EFCAB11-204, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 5

Gene EFCAB11, Length 624 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-204ENST00000553871 PTPN11Q06124 597 aaPredicted RBP5.62□□□□□ -1.51
EFCAB11-204ENST00000553871 KIF4BQ2VIQ3 1234 aa5.62□□□□□ -1.51
EFCAB11-204ENST00000553871 EXOSC6Q5RKV6 272 aaKnown RBP5.62□□□□□ -1.51
EFCAB11-204ENST00000553871 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.62□□□□□ -1.51
EFCAB11-204ENST00000553871 ILDR2Q71H61 639 aa5.62□□□□□ -1.51
EFCAB11-204ENST00000553871 UBXN4Q92575 508 aa5.62□□□□□ -1.51
EFCAB11-204ENST00000553871 PLPPR2Q96GM1 343 aa5.62□□□□□ -1.51
EFCAB11-204ENST00000553871 WDR18Q9BV38 432 aa5.62□□□□□ -1.51
EFCAB11-204ENST00000553871 LRRC3Q9BY71 257 aa5.62□□□□□ -1.51
EFCAB11-204ENST00000553871 PRAMEF27A3QJZ7 478 aa5.61□□□□□ -1.51
EFCAB11-204ENST00000553871 DCDC2CA8MYV0 355 aa5.61□□□□□ -1.51
EFCAB11-204ENST00000553871 TM4SF5O14894 197 aa5.61□□□□□ -1.51
EFCAB11-204ENST00000553871 GTF2F1P35269 517 aaKnown RBP eCLIP5.61□□□□□ -1.51
EFCAB11-204ENST00000553871 ID3Q02535 119 aa5.61□□□□□ -1.51
EFCAB11-204ENST00000553871 MLECQ14165 292 aa5.61□□□□□ -1.51
EFCAB11-204ENST00000553871 GRIK4Q16099 956 aa5.61□□□□□ -1.51
EFCAB11-204ENST00000553871 LRFN4Q6PJG9 635 aa5.61□□□□□ -1.51
EFCAB11-204ENST00000553871 SHISA2Q6UWI4 295 aa5.61□□□□□ -1.51
EFCAB11-204ENST00000553871 GK5Q6ZS86 529 aa5.61□□□□□ -1.51
EFCAB11-204ENST00000553871 KIAA1211Q6ZU35 1233 aa5.61□□□□□ -1.51
EFCAB11-204ENST00000553871 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.61□□□□□ -1.51
EFCAB11-204ENST00000553871 SLITRK4Q8IW52 837 aa5.61□□□□□ -1.51
EFCAB11-204ENST00000553871 WDR89Q96FK6 387 aaPredicted RBP5.61□□□□□ -1.51
EFCAB11-204ENST00000553871 CRBNQ96SW2 442 aa5.61□□□□□ -1.51
EFCAB11-204ENST00000553871 GMLQ99445 158 aa5.61□□□□□ -1.51
EFCAB11-204ENST00000553871 BRMS1Q9HCU9 246 aa5.61□□□□□ -1.51
EFCAB11-204ENST00000553871 STRIP2Q9ULQ0 834 aa5.61□□□□□ -1.51
EFCAB11-204ENST00000553871 CSADQ9Y600 493 aa5.61□□□□□ -1.51
EFCAB11-204ENST00000553871 SNCAIPQ9Y6H5 919 aa5.61□□□□□ -1.51
EFCAB11-204ENST00000553871 SART1O43290 800 aaKnown RBP5.6□□□□□ -1.51
EFCAB11-204ENST00000553871 GRIN3BO60391 1043 aa5.6□□□□□ -1.51
EFCAB11-204ENST00000553871 IGSF3O75054 1194 aa5.6□□□□□ -1.51
EFCAB11-204ENST00000553871 STK10O94804 968 aaKnown RBP5.6□□□□□ -1.51
EFCAB11-204ENST00000553871 DLGAP3O95886 979 aa5.6□□□□□ -1.51
EFCAB11-204ENST00000553871 FGRP09769 529 aa5.6□□□□□ -1.51
EFCAB11-204ENST00000553871 SOX9P48436 509 aa5.6□□□□□ -1.51
EFCAB11-204ENST00000553871 NRG1Q02297 640 aaPredicted RBP5.6□□□□□ -1.51
EFCAB11-204ENST00000553871 PDE4BQ07343 736 aa5.6□□□□□ -1.51
EFCAB11-204ENST00000553871 MCF2L2Q86YR7 1114 aa5.6□□□□□ -1.51
EFCAB11-204ENST00000553871 AGGF1Q8N302 714 aaeCLIP5.6□□□□□ -1.51
EFCAB11-204ENST00000553871 C12orf50Q8NA57 414 aaPredicted RBP5.6□□□□□ -1.51
EFCAB11-204ENST00000553871 TMPRSS13Q9BYE2 586 aa5.6□□□□□ -1.51
EFCAB11-204ENST00000553871 PIDD1Q9HB75 910 aa5.6□□□□□ -1.51
EFCAB11-204ENST00000553871 CACNA2D2Q9NY47 1150 aa5.6□□□□□ -1.51
EFCAB11-204ENST00000553871 MEGF11A6BM72 1044 aa5.59□□□□□ -1.51
EFCAB11-204ENST00000553871 C9orf172C9J069 976 aa5.59□□□□□ -1.51
EFCAB11-204ENST00000553871 F8W735 103 aaPredicted RBP5.59□□□□□ -1.51
EFCAB11-204ENST00000553871 RNF225M0QZC1 329 aaPredicted RBP5.59□□□□□ -1.51
EFCAB11-204ENST00000553871 GAS2O43903 313 aaKnown RBP5.59□□□□□ -1.51
EFCAB11-204ENST00000553871 ADH5P11766 374 aa5.59□□□□□ -1.51
EFCAB11-204ENST00000553871 IMPDH2P12268 514 aa5.59□□□□□ -1.51
EFCAB11-204ENST00000553871 GLB1P16278 677 aa5.59□□□□□ -1.51
EFCAB11-204ENST00000553871 LORP23490 312 aaPredicted RBP5.59□□□□□ -1.51
EFCAB11-204ENST00000553871 CDK8P49336 464 aa5.59□□□□□ -1.51
EFCAB11-204ENST00000553871 ETF1P62495 437 aaKnown RBP5.59□□□□□ -1.51
EFCAB11-204ENST00000553871 INPP5AQ14642 412 aa5.59□□□□□ -1.51
EFCAB11-204ENST00000553871 ANKRD34AQ69YU3 496 aa5.59□□□□□ -1.51
EFCAB11-204ENST00000553871 CCDC81Q6ZN84 652 aa5.59□□□□□ -1.51
EFCAB11-204ENST00000553871 DYMQ7RTS9 669 aa5.59□□□□□ -1.51
EFCAB11-204ENST00000553871 C12orf40Q86WS4 652 aa5.59□□□□□ -1.51
EFCAB11-204ENST00000553871 DHX38Q92620 1227 aaKnown RBP5.59□□□□□ -1.51
EFCAB11-204ENST00000553871 ANAPC16Q96DE5 110 aa5.59□□□□□ -1.51
EFCAB11-204ENST00000553871 SRRTQ9BXP5 876 aaKnown RBP5.59□□□□□ -1.51
EFCAB11-204ENST00000553871 CEP41Q9BYV8 373 aa5.59□□□□□ -1.51
EFCAB11-204ENST00000553871 ATXN3LQ9H3M9 355 aa5.59□□□□□ -1.51
EFCAB11-204ENST00000553871 AKTIPQ9H8T0 292 aa5.59□□□□□ -1.51
EFCAB11-204ENST00000553871 SUGCTQ9HAC7 445 aa5.59□□□□□ -1.51
EFCAB11-204ENST00000553871 PPT2Q9UMR5 302 aa5.59□□□□□ -1.51
EFCAB11-204ENST00000553871 PCDHB14Q9Y5E9 798 aa5.59□□□□□ -1.51
EFCAB11-204ENST00000553871 SYNGAP1Q96PV0 1343 aa5.58□□□□□ -1.52
EFCAB11-204ENST00000553871 TMPRSS2O15393 492 aa5.58□□□□□ -1.52
EFCAB11-204ENST00000553871 PLCG1P19174 1290 aa5.58□□□□□ -1.52
EFCAB11-204ENST00000553871 EIF6P56537 245 aaKnown RBP5.58□□□□□ -1.52
EFCAB11-204ENST00000553871 ERVK-24P63145 666 aa5.58□□□□□ -1.52
EFCAB11-204ENST00000553871 ZC3H12AQ5D1E8 599 aaKnown RBP5.58□□□□□ -1.52
EFCAB11-204ENST00000553871 PPM1JQ5JR12 505 aa5.58□□□□□ -1.52
EFCAB11-204ENST00000553871 ALYREFQ86V81 257 aaKnown RBP5.58□□□□□ -1.52
EFCAB11-204ENST00000553871 REXO1Q8N1G1 1221 aaKnown RBP5.58□□□□□ -1.52
EFCAB11-204ENST00000553871 SMG8Q8ND04 991 aaKnown RBP5.58□□□□□ -1.52
EFCAB11-204ENST00000553871 ARMC5Q96C12 935 aa5.58□□□□□ -1.52
EFCAB11-204ENST00000553871 SSU72Q9NP77 194 aaKnown RBP5.58□□□□□ -1.52
EFCAB11-204ENST00000553871 HIF3AQ9Y2N7 669 aa5.58□□□□□ -1.52
EFCAB11-204ENST00000553871 R3HCC1Q9Y3T6 440 aaKnown RBP5.58□□□□□ -1.52
EFCAB11-204ENST00000553871 RNGTTO60942 597 aaKnown RBP5.57□□□□□ -1.52
EFCAB11-204ENST00000553871 ALX3O95076 343 aa5.57□□□□□ -1.52
EFCAB11-204ENST00000553871 HTR3BO95264 441 aa5.57□□□□□ -1.52
EFCAB11-204ENST00000553871 PGRP06401 933 aa5.57□□□□□ -1.52
EFCAB11-204ENST00000553871 SELPP16109 830 aa5.57□□□□□ -1.52
EFCAB11-204ENST00000553871 GRK4P32298 578 aa5.57□□□□□ -1.52
EFCAB11-204ENST00000553871 SOX4Q06945 474 aaPredicted RBP5.57□□□□□ -1.52
EFCAB11-204ENST00000553871 CDC37L1Q7L3B6 337 aa5.57□□□□□ -1.52
EFCAB11-204ENST00000553871 CKAP2LQ8IYA6 745 aa5.57□□□□□ -1.52
EFCAB11-204ENST00000553871 TMEM130Q8N3G9 435 aa5.57□□□□□ -1.52
EFCAB11-204ENST00000553871 LENG1Q96BZ8 264 aaPredicted RBP5.57□□□□□ -1.52
EFCAB11-204ENST00000553871 DNAJC2Q99543 621 aaKnown RBP5.57□□□□□ -1.52
EFCAB11-204ENST00000553871 HIRIP3Q9BW71 556 aaPredicted RBP5.57□□□□□ -1.52
EFCAB11-204ENST00000553871 CRIM1Q9NZV1 1036 aa5.57□□□□□ -1.52
EFCAB11-204ENST00000553871 PPP1R9AQ9ULJ8 1098 aa5.57□□□□□ -1.52
EFCAB11-204ENST00000553871 POLR3KQ9Y2Y1 108 aaPredicted RBP5.57□□□□□ -1.52
EFCAB11-204ENST00000553871 PCDHGC5Q9Y5F6 944 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms