RNA–Protein interactions for RNA: ENST00000553868.1

SHMT2-208, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-208ENST00000553868 VEZTQ9HBM0 779 aa17.53■□□□□ 0.4
SHMT2-208ENST00000553868 DBNLQ9UJU6 430 aaKnown RBP17.53■□□□□ 0.4
SHMT2-208ENST00000553868 ZNF804BA4D1E1 1349 aa17.52■□□□□ 0.4
SHMT2-208ENST00000553868 SPEF2Q9C093 1822 aa17.52■□□□□ 0.4
SHMT2-208ENST00000553868 TLR2O60603 784 aa17.52■□□□□ 0.4
SHMT2-208ENST00000553868 SLC5A1P13866 664 aa17.52■□□□□ 0.4
SHMT2-208ENST00000553868 ATP5JP18859 108 aa17.52■□□□□ 0.4
SHMT2-208ENST00000553868 GRK4P32298 578 aa17.52■□□□□ 0.4
SHMT2-208ENST00000553868 BCAMP50895 628 aa17.52■□□□□ 0.4
SHMT2-208ENST00000553868 GTF2IP78347 998 aa17.52■□□□□ 0.4
SHMT2-208ENST00000553868 VGLL2Q8N8G2 317 aa17.52■□□□□ 0.4
SHMT2-208ENST00000553868 U2AF1L4Q8WU68 220 aaKnown RBP17.52■□□□□ 0.4
SHMT2-208ENST00000553868 LPIN2Q92539 896 aa17.52■□□□□ 0.4
SHMT2-208ENST00000553868 ANKRD2Q9GZV1 360 aa17.52■□□□□ 0.4
SHMT2-208ENST00000553868 PPP2R3BQ9Y5P8 575 aa17.52■□□□□ 0.4
SHMT2-208ENST00000553868 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.52■□□□□ 0.4
SHMT2-208ENST00000553868 ECM29Q5VYK3 1845 aa17.51■□□□□ 0.39
SHMT2-208ENST00000553868 TRIM6-TRIM34B2RNG4 842 aa17.51■□□□□ 0.39
SHMT2-208ENST00000553868 IFIT1P09914 478 aaKnown RBP17.51■□□□□ 0.39
SHMT2-208ENST00000553868 SDSP20132 328 aa17.51■□□□□ 0.39
SHMT2-208ENST00000553868 CCDC158Q5M9N0 1113 aa17.51■□□□□ 0.39
SHMT2-208ENST00000553868 TSHZ3Q63HK5 1081 aa17.51■□□□□ 0.39
SHMT2-208ENST00000553868 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.51■□□□□ 0.39
SHMT2-208ENST00000553868 CDAN1Q8IWY9 1227 aa17.51■□□□□ 0.39
SHMT2-208ENST00000553868 TRIM47Q96LD4 638 aa17.51■□□□□ 0.39
SHMT2-208ENST00000553868 GDF15Q99988 308 aa17.51■□□□□ 0.39
SHMT2-208ENST00000553868 DBNDD2Q9BQY9 259 aa17.51■□□□□ 0.39
SHMT2-208ENST00000553868 COA1Q9GZY4 146 aa17.51■□□□□ 0.39
SHMT2-208ENST00000553868 TLR7Q9NYK1 1049 aaKnown RBP17.51■□□□□ 0.39
SHMT2-208ENST00000553868 BIN2Q9UBW5 565 aaPredicted RBP17.51■□□□□ 0.39
SHMT2-208ENST00000553868 SRRDQ9UH36 339 aa17.51■□□□□ 0.39
SHMT2-208ENST00000553868 F8W031 263 aaPredicted RBP17.5■□□□□ 0.39
SHMT2-208ENST00000553868 TIMM10P62072 90 aa17.5■□□□□ 0.39
SHMT2-208ENST00000553868 CHRNDQ07001 517 aa17.5■□□□□ 0.39
SHMT2-208ENST00000553868 RASA3Q14644 834 aa17.5■□□□□ 0.39
SHMT2-208ENST00000553868 CERS5Q8N5B7 392 aa17.5■□□□□ 0.39
SHMT2-208ENST00000553868 RAET1EQ8TD07 263 aa17.5■□□□□ 0.39
SHMT2-208ENST00000553868 PRMT6Q96LA8 375 aaPredicted RBP17.5■□□□□ 0.39
SHMT2-208ENST00000553868 UNC93B1Q9H1C4 597 aa17.5■□□□□ 0.39
SHMT2-208ENST00000553868 RAPGEFL1Q9UHV5 662 aa17.5■□□□□ 0.39
SHMT2-208ENST00000553868 MINPP1Q9UNW1 487 aa17.5■□□□□ 0.39
SHMT2-208ENST00000553868 OSBPP22059 807 aa17.49■□□□□ 0.39
SHMT2-208ENST00000553868 PSMC4P43686 418 aa17.49■□□□□ 0.39
SHMT2-208ENST00000553868 GTF2A2P52657 109 aa17.49■□□□□ 0.39
SHMT2-208ENST00000553868 PRMT2P55345 433 aa17.49■□□□□ 0.39
SHMT2-208ENST00000553868 VGLL4Q14135 290 aa17.49■□□□□ 0.39
SHMT2-208ENST00000553868 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.49■□□□□ 0.39
SHMT2-208ENST00000553868 RILPL2Q969X0 211 aa17.49■□□□□ 0.39
SHMT2-208ENST00000553868 XAGE2Q96GT9 111 aa17.49■□□□□ 0.39
SHMT2-208ENST00000553868 UPF2Q9HAU5 1272 aaKnown RBP17.49■□□□□ 0.39
SHMT2-208ENST00000553868 ZMYND8Q9ULU4 1186 aaPredicted RBP17.49■□□□□ 0.39
SHMT2-208ENST00000553868 PRUNE2Q8WUY3 3088 aa17.48■□□□□ 0.39
SHMT2-208ENST00000553868 BTBD19C9JJ37 291 aa17.48■□□□□ 0.39
SHMT2-208ENST00000553868 GNRH1P01148 92 aa17.48■□□□□ 0.39
SHMT2-208ENST00000553868 FGFR2P21802 821 aa17.48■□□□□ 0.39
SHMT2-208ENST00000553868 MMP14P50281 582 aa17.48■□□□□ 0.39
SHMT2-208ENST00000553868 UBE4AQ14139 1066 aa17.48■□□□□ 0.39
SHMT2-208ENST00000553868 CFAP100Q494V2 611 aa17.48■□□□□ 0.39
SHMT2-208ENST00000553868 TTC39AQ5SRH9 613 aa17.48■□□□□ 0.39
SHMT2-208ENST00000553868 EVI5LQ96CN4 794 aa17.48■□□□□ 0.39
SHMT2-208ENST00000553868 TSHZ2Q9NRE2 1034 aa17.48■□□□□ 0.39
SHMT2-208ENST00000553868 CPA4Q9UI42 421 aa17.48■□□□□ 0.39
SHMT2-208ENST00000553868 MUC3AQ02505 3323 aa17.47■□□□□ 0.39
SHMT2-208ENST00000553868 SGPL1O95470 568 aa17.47■□□□□ 0.39
SHMT2-208ENST00000553868 UQCRFS1P1P0C7P4 283 aa17.47■□□□□ 0.39
SHMT2-208ENST00000553868 BMP8BP34820 402 aa17.47■□□□□ 0.39
SHMT2-208ENST00000553868 KCNJ4P48050 445 aa17.47■□□□□ 0.39
SHMT2-208ENST00000553868 LRIT3Q3SXY7 679 aa17.47■□□□□ 0.39
SHMT2-208ENST00000553868 HELBQ8NG08 1087 aaPredicted RBP17.47■□□□□ 0.39
SHMT2-208ENST00000553868 MYPNQ86TC9 1320 aa17.47■□□□□ 0.39
SHMT2-208ENST00000553868 SPDYE2BA6NHP3 402 aa17.46■□□□□ 0.39
SHMT2-208ENST00000553868 SPDYE6P0CI01 402 aa17.46■□□□□ 0.39
SHMT2-208ENST00000553868 COL9A1P20849 921 aa17.46■□□□□ 0.39
SHMT2-208ENST00000553868 TICAM2Q86XR7 235 aa17.46■□□□□ 0.39
SHMT2-208ENST00000553868 C7orf61Q8IZ16 206 aa17.46■□□□□ 0.39
SHMT2-208ENST00000553868 MTMR14Q8NCE2 650 aa17.46■□□□□ 0.39
SHMT2-208ENST00000553868 ZNF512BQ96KM6 892 aaPredicted RBP17.46■□□□□ 0.39
SHMT2-208ENST00000553868 HAUS7Q99871 368 aa17.46■□□□□ 0.39
SHMT2-208ENST00000553868 BOLA2Q9H3K6 86 aa17.46■□□□□ 0.39
SHMT2-208ENST00000553868 LAMA2P24043 3122 aaKnown RBP17.45■□□□□ 0.38
SHMT2-208ENST00000553868 HIP1O00291 1037 aa17.45■□□□□ 0.38
SHMT2-208ENST00000553868 TAF5LO75529 589 aa17.45■□□□□ 0.38
SHMT2-208ENST00000553868 FMNL1O95466 1100 aaPredicted RBP17.45■□□□□ 0.38
SHMT2-208ENST00000553868 SYN1P17600 705 aa17.45■□□□□ 0.38
SHMT2-208ENST00000553868 C17orf99Q6UX52 265 aa17.45■□□□□ 0.38
SHMT2-208ENST00000553868 TBC1D9Q6ZT07 1266 aa17.45■□□□□ 0.38
SHMT2-208ENST00000553868 GUCD1Q96NT3 240 aa17.45■□□□□ 0.38
SHMT2-208ENST00000553868 RPTORQ8N122 1335 aa17.45■□□□□ 0.38
SHMT2-208ENST00000553868 MYO1BO43795 1136 aa17.44■□□□□ 0.38
SHMT2-208ENST00000553868 WDHD1O75717 1129 aaPredicted RBP17.44■□□□□ 0.38
SHMT2-208ENST00000553868 TFRCP02786 760 aaKnown RBP17.44■□□□□ 0.38
SHMT2-208ENST00000553868 ADORA1P30542 326 aa17.44■□□□□ 0.38
SHMT2-208ENST00000553868 UBXN2AP68543 259 aa17.44■□□□□ 0.38
SHMT2-208ENST00000553868 PRKCZQ05513 592 aa17.44■□□□□ 0.38
SHMT2-208ENST00000553868 DIS3LQ8TF46 1054 aaKnown RBP17.44■□□□□ 0.38
SHMT2-208ENST00000553868 PAWRQ96IZ0 340 aaKnown RBP17.44■□□□□ 0.38
SHMT2-208ENST00000553868 FAM161BQ96MY7 647 aa17.44■□□□□ 0.38
SHMT2-208ENST00000553868 LEMD3Q9Y2U8 911 aa17.44■□□□□ 0.38
SHMT2-208ENST00000553868 TTC28Q96AY4 2481 aa17.44■□□□□ 0.38
SHMT2-208ENST00000553868 MAGEA10P43363 369 aaPredicted RBP17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 197.9 ms