RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 TEKT1Q969V4 418 aa10.21□□□□□ -0.77
PSEN1-209ENST00000553855 KIF1BPQ96EK5 621 aa10.21□□□□□ -0.77
PSEN1-209ENST00000553855 BCL11AQ9H165 835 aa10.21□□□□□ -0.77
PSEN1-209ENST00000553855 FAM217BQ9NTX9 383 aaPredicted RBP10.21□□□□□ -0.77
PSEN1-209ENST00000553855 EXOC6BQ9Y2D4 811 aa10.21□□□□□ -0.77
PSEN1-209ENST00000553855 FPGT-TNNI3KV9GXZ4 949 aa10.21□□□□□ -0.77
PSEN1-209ENST00000553855 TRAF5O00463 557 aa10.2□□□□□ -0.78
PSEN1-209ENST00000553855 EGFRP00533 1210 aa10.2□□□□□ -0.78
PSEN1-209ENST00000553855 IFIT2P09913 472 aaKnown RBP10.2□□□□□ -0.78
PSEN1-209ENST00000553855 ADORA1P30542 326 aa10.2□□□□□ -0.78
PSEN1-209ENST00000553855 CRKP46108 304 aa10.2□□□□□ -0.78
PSEN1-209ENST00000553855 TNNI2P48788 182 aa10.2□□□□□ -0.78
PSEN1-209ENST00000553855 FOSBP53539 338 aa10.2□□□□□ -0.78
PSEN1-209ENST00000553855 NBPF9Q3BBW0 867 aa10.2□□□□□ -0.78
PSEN1-209ENST00000553855 DZIP1Q86YF9 867 aaKnown RBP10.2□□□□□ -0.78
PSEN1-209ENST00000553855 MTMR14Q8NCE2 650 aa10.2□□□□□ -0.78
PSEN1-209ENST00000553855 ARID3AQ99856 593 aa10.2□□□□□ -0.78
PSEN1-209ENST00000553855 BEGAINQ9BUH8 593 aa10.2□□□□□ -0.78
PSEN1-209ENST00000553855 VEZTQ9HBM0 779 aa10.2□□□□□ -0.78
PSEN1-209ENST00000553855 ABCF2Q9UG63 623 aa10.2□□□□□ -0.78
PSEN1-209ENST00000553855 ADM5C9JUS6 153 aa10.19□□□□□ -0.78
PSEN1-209ENST00000553855 ECE1P42892 770 aa10.19□□□□□ -0.78
PSEN1-209ENST00000553855 AAMPQ13685 434 aa10.19□□□□□ -0.78
PSEN1-209ENST00000553855 DEFB115Q30KQ5 88 aa10.19□□□□□ -0.78
PSEN1-209ENST00000553855 PADI6Q6TGC4 694 aa10.19□□□□□ -0.78
PSEN1-209ENST00000553855 AACSQ86V21 672 aa10.19□□□□□ -0.78
PSEN1-209ENST00000553855 RHPN1Q8TCX5 695 aa10.19□□□□□ -0.78
PSEN1-209ENST00000553855 MRIQ9BWK5 157 aa10.19□□□□□ -0.78
PSEN1-209ENST00000553855 PPP2R3BQ9Y5P8 575 aa10.19□□□□□ -0.78
PSEN1-209ENST00000553855 SCN9AQ15858 1988 aa10.19□□□□□ -0.78
PSEN1-209ENST00000553855 A0A1B0GUL6 1792 aa10.19□□□□□ -0.78
PSEN1-209ENST00000553855 PDS5AQ29RF7 1337 aaKnown RBP10.18□□□□□ -0.78
PSEN1-209ENST00000553855 SALL1Q9NSC2 1324 aa10.18□□□□□ -0.78
PSEN1-209ENST00000553855 LDHCP07864 332 aa10.18□□□□□ -0.78
PSEN1-209ENST00000553855 GSTO1P78417 241 aa10.18□□□□□ -0.78
PSEN1-209ENST00000553855 HTRA3P83110 453 aa10.18□□□□□ -0.78
PSEN1-209ENST00000553855 MCM6Q14566 821 aa10.18□□□□□ -0.78
PSEN1-209ENST00000553855 SUPT20HL1Q3ZLR7 823 aa10.18□□□□□ -0.78
PSEN1-209ENST00000553855 C6orf132Q5T0Z8 1188 aa10.18□□□□□ -0.78
PSEN1-209ENST00000553855 HHIPL2Q6UWX4 724 aa10.18□□□□□ -0.78
PSEN1-209ENST00000553855 SPATA5Q8NB90 893 aa10.18□□□□□ -0.78
PSEN1-209ENST00000553855 PXYLP1Q8TE99 480 aa10.18□□□□□ -0.78
PSEN1-209ENST00000553855 KLRG1Q96E93 195 aa10.18□□□□□ -0.78
PSEN1-209ENST00000553855 CDCA5Q96FF9 252 aa10.18□□□□□ -0.78
PSEN1-209ENST00000553855 DBNDD2Q9BQY9 259 aa10.18□□□□□ -0.78
PSEN1-209ENST00000553855 NOL10Q9BSC4 688 aaKnown RBP10.18□□□□□ -0.78
PSEN1-209ENST00000553855 CCDC8Q9H0W5 538 aaPredicted RBP10.18□□□□□ -0.78
PSEN1-209ENST00000553855 GBA2Q9HCG7 927 aaPredicted RBP10.18□□□□□ -0.78
PSEN1-209ENST00000553855 IL1RAPL2Q9NP60 686 aa10.18□□□□□ -0.78
PSEN1-209ENST00000553855 LRP2BPQ9P2M1 347 aa10.18□□□□□ -0.78
PSEN1-209ENST00000553855 RBM27Q9P2N5 1060 aaKnown RBP10.18□□□□□ -0.78
PSEN1-209ENST00000553855 MKRN1Q9UHC7 482 aaKnown RBP10.18□□□□□ -0.78
PSEN1-209ENST00000553855 ADGRG1Q9Y653 693 aa10.18□□□□□ -0.78
PSEN1-209ENST00000553855 ADAMTSL1Q8N6G6 1762 aa10.18□□□□□ -0.78
PSEN1-209ENST00000553855 PSME4Q14997 1843 aa10.17□□□□□ -0.78
PSEN1-209ENST00000553855 ASTN2O75129 1339 aaPredicted RBP10.17□□□□□ -0.78
PSEN1-209ENST00000553855 CLRN2A0PK11 232 aa10.17□□□□□ -0.78
PSEN1-209ENST00000553855 ARID4AP29374 1257 aaPredicted RBP10.17□□□□□ -0.78
PSEN1-209ENST00000553855 FKBP1BP68106 108 aa10.17□□□□□ -0.78
PSEN1-209ENST00000553855 GRM1Q13255 1194 aa10.17□□□□□ -0.78
PSEN1-209ENST00000553855 RASGRF1Q13972 1273 aa10.17□□□□□ -0.78
PSEN1-209ENST00000553855 VARS2Q5ST30 1063 aaKnown RBP10.17□□□□□ -0.78
PSEN1-209ENST00000553855 ARMC9Q7Z3E5 817 aa10.17□□□□□ -0.78
PSEN1-209ENST00000553855 HOOK2Q96ED9 719 aa10.17□□□□□ -0.78
PSEN1-209ENST00000553855 GPATCH3Q96I76 525 aa10.17□□□□□ -0.78
PSEN1-209ENST00000553855 PRMT6Q96LA8 375 aaPredicted RBP10.17□□□□□ -0.78
PSEN1-209ENST00000553855 HS3ST6Q96QI5 342 aa10.17□□□□□ -0.78
PSEN1-209ENST00000553855 CRBNQ96SW2 442 aa10.17□□□□□ -0.78
PSEN1-209ENST00000553855 LRRCC1Q9C099 1032 aa10.17□□□□□ -0.78
PSEN1-209ENST00000553855 TDRD3Q9H7E2 651 aaKnown RBP10.17□□□□□ -0.78
PSEN1-209ENST00000553855 RAI14Q9P0K7 980 aa10.17□□□□□ -0.78
PSEN1-209ENST00000553855 PPP1R12BO60237 982 aaPredicted RBP10.16□□□□□ -0.78
PSEN1-209ENST00000553855 IGSF3O75054 1194 aa10.16□□□□□ -0.78
PSEN1-209ENST00000553855 PRDX5P30044 214 aa10.16□□□□□ -0.78
PSEN1-209ENST00000553855 HUNKP57058 714 aa10.16□□□□□ -0.78
PSEN1-209ENST00000553855 FMR1Q06787 632 aaKnown RBP eCLIP10.16□□□□□ -0.78
PSEN1-209ENST00000553855 TTC13Q8NBP0 860 aa10.16□□□□□ -0.78
PSEN1-209ENST00000553855 ZDHHC16Q969W1 377 aa10.16□□□□□ -0.78
PSEN1-209ENST00000553855 ZBED3Q96IU2 234 aaPredicted RBP10.16□□□□□ -0.78
PSEN1-209ENST00000553855 ZDHHC15Q96MV8 337 aa10.16□□□□□ -0.78
PSEN1-209ENST00000553855 DEFB129Q9H1M3 183 aa10.16□□□□□ -0.78
PSEN1-209ENST00000553855 HMG20BQ9P0W2 317 aa10.16□□□□□ -0.78
PSEN1-209ENST00000553855 ZNF70Q9UC06 446 aaPredicted RBP10.16□□□□□ -0.78
PSEN1-209ENST00000553855 SUPT16HQ9Y5B9 1047 aaKnown RBP10.16□□□□□ -0.78
PSEN1-209ENST00000553855 TLL2Q9Y6L7 1015 aa10.16□□□□□ -0.78
PSEN1-209ENST00000553855 COL1A1P02452 1464 aaPredicted RBP10.16□□□□□ -0.78
PSEN1-209ENST00000553855 CNTNAP1P78357 1384 aa10.15□□□□□ -0.78
PSEN1-209ENST00000553855 RASSF10A6NK89 507 aa10.15□□□□□ -0.78
PSEN1-209ENST00000553855 TCP10L2B9ZVM9 353 aa10.15□□□□□ -0.78
PSEN1-209ENST00000553855 TRAK2O60296 914 aa10.15□□□□□ -0.78
PSEN1-209ENST00000553855 TTF1Q15361 905 aaPredicted RBP10.15□□□□□ -0.78
PSEN1-209ENST00000553855 CST9Q5W186 159 aa10.15□□□□□ -0.78
PSEN1-209ENST00000553855 SIRT2Q8IXJ6 389 aa10.15□□□□□ -0.78
PSEN1-209ENST00000553855 ZNF454Q8N9F8 522 aa10.15□□□□□ -0.78
PSEN1-209ENST00000553855 NLRP7Q8WX94 980 aa10.15□□□□□ -0.78
PSEN1-209ENST00000553855 EAF2Q96CJ1 260 aaPredicted RBP10.15□□□□□ -0.78
PSEN1-209ENST00000553855 HHIPL1Q96JK4 782 aa10.15□□□□□ -0.78
PSEN1-209ENST00000553855 ZNF512BQ96KM6 892 aaPredicted RBP10.15□□□□□ -0.78
PSEN1-209ENST00000553855 SNRKQ9NRH2 765 aa10.15□□□□□ -0.78
PSEN1-209ENST00000553855 DBNLQ9UJU6 430 aaKnown RBP10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms