RNA–Protein interactions for RNA: ENST00000553753.5

HNRNPC-208, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5 BASIC

Gene HNRNPC, Length 1,790 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-208ENST00000553753 DCTPP1Q9H773 170 aa12.45□□□□□ -0.42
HNRNPC-208ENST00000553753 DDX4Q9NQI0 724 aaKnown RBP12.45□□□□□ -0.42
HNRNPC-208ENST00000553753 PCDHB15Q9Y5E8 787 aa12.45□□□□□ -0.42
HNRNPC-208ENST00000553753 NPM3O75607 178 aaKnown RBP12.44□□□□□ -0.42
HNRNPC-208ENST00000553753 GJA5P36382 358 aa12.44□□□□□ -0.42
HNRNPC-208ENST00000553753 ADGRA1Q86SQ6 560 aa12.44□□□□□ -0.42
HNRNPC-208ENST00000553753 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.44□□□□□ -0.42
HNRNPC-208ENST00000553753 AATFQ9NY61 560 aaKnown RBP eCLIP12.44□□□□□ -0.42
HNRNPC-208ENST00000553753 OTOFQ9HC10 1997 aa12.44□□□□□ -0.42
HNRNPC-208ENST00000553753 DDTLA6NHG4 134 aaPredicted RBP12.43□□□□□ -0.42
HNRNPC-208ENST00000553753 PLCG2P16885 1265 aa12.43□□□□□ -0.42
HNRNPC-208ENST00000553753 PPP4CP60510 307 aa12.43□□□□□ -0.42
HNRNPC-208ENST00000553753 MAP3K12Q12852 859 aa12.43□□□□□ -0.42
HNRNPC-208ENST00000553753 TTF1Q15361 905 aaPredicted RBP12.43□□□□□ -0.42
HNRNPC-208ENST00000553753 SH3BP5LQ7L8J4 393 aa12.43□□□□□ -0.42
HNRNPC-208ENST00000553753 CRBNQ96SW2 442 aa12.43□□□□□ -0.42
HNRNPC-208ENST00000553753 ZNF112Q9UJU3 913 aa12.43□□□□□ -0.42
HNRNPC-208ENST00000553753 MYO5AQ9Y4I1 1855 aaKnown RBP12.43□□□□□ -0.42
HNRNPC-208ENST00000553753 SMARCA5O60264 1052 aaPredicted RBP12.43□□□□□ -0.42
HNRNPC-208ENST00000553753 CYP7A1P22680 504 aa12.43□□□□□ -0.42
HNRNPC-208ENST00000553753 IFFO2Q5TF58 517 aa12.43□□□□□ -0.42
HNRNPC-208ENST00000553753 TMED8Q6PL24 325 aaPredicted RBP12.43□□□□□ -0.42
HNRNPC-208ENST00000553753 TEX11Q8IYF3 940 aa12.43□□□□□ -0.42
HNRNPC-208ENST00000553753 SH3RF3Q8TEJ3 882 aaPredicted RBP12.43□□□□□ -0.42
HNRNPC-208ENST00000553753 CNKSR2Q8WXI2 1034 aa12.43□□□□□ -0.42
HNRNPC-208ENST00000553753 OTUD5Q96G74 571 aa12.43□□□□□ -0.42
HNRNPC-208ENST00000553753 SNCAIPQ9Y6H5 919 aa12.43□□□□□ -0.42
HNRNPC-208ENST00000553753 CASP8AP2Q9UKL3 1982 aa12.42□□□□□ -0.42
HNRNPC-208ENST00000553753 SPDYE5A6NIY4 337 aa12.42□□□□□ -0.42
HNRNPC-208ENST00000553753 ALDH1A1P00352 501 aa12.42□□□□□ -0.42
HNRNPC-208ENST00000553753 ATP5JP18859 108 aa12.42□□□□□ -0.42
HNRNPC-208ENST00000553753 INPP5BP32019 993 aa12.42□□□□□ -0.42
HNRNPC-208ENST00000553753 MAP3K10Q02779 954 aa12.42□□□□□ -0.42
HNRNPC-208ENST00000553753 ERO1BQ86YB8 467 aa12.42□□□□□ -0.42
HNRNPC-208ENST00000553753 IFNL1Q8IU54 200 aa12.42□□□□□ -0.42
HNRNPC-208ENST00000553753 MAGEB6Q8N7X4 407 aa12.42□□□□□ -0.42
HNRNPC-208ENST00000553753 ATRNL1Q5VV63 1379 aa12.42□□□□□ -0.42
HNRNPC-208ENST00000553753 MAST2Q6P0Q8 1798 aa12.41□□□□□ -0.42
HNRNPC-208ENST00000553753 GOLIM4O00461 696 aa12.41□□□□□ -0.42
HNRNPC-208ENST00000553753 TBC1D8O95759 1140 aa12.41□□□□□ -0.42
HNRNPC-208ENST00000553753 MS4A4AQ96JQ5 239 aa12.41□□□□□ -0.42
HNRNPC-208ENST00000553753 DNAJC2Q99543 621 aaKnown RBP12.41□□□□□ -0.42
HNRNPC-208ENST00000553753 OSBPL5Q9H0X9 879 aaPredicted RBP12.41□□□□□ -0.42
HNRNPC-208ENST00000553753 BOLA2Q9H3K6 86 aa12.41□□□□□ -0.42
HNRNPC-208ENST00000553753 TESPA1A2RU30 521 aaPredicted RBP12.41□□□□□ -0.42
HNRNPC-208ENST00000553753 PHF20L1A8MW92 1017 aa12.41□□□□□ -0.42
HNRNPC-208ENST00000553753 IGF2BP3O00425 579 aaKnown RBP eCLIP12.41□□□□□ -0.42
HNRNPC-208ENST00000553753 IRF6O14896 467 aa12.41□□□□□ -0.42
HNRNPC-208ENST00000553753 GTF2A2P52657 109 aa12.41□□□□□ -0.42
HNRNPC-208ENST00000553753 OTUD7BQ6GQQ9 843 aa12.41□□□□□ -0.42
HNRNPC-208ENST00000553753 CERS3Q8IU89 383 aa12.41□□□□□ -0.42
HNRNPC-208ENST00000553753 TGFBRAP1Q8WUH2 860 aa12.41□□□□□ -0.42
HNRNPC-208ENST00000553753 CFHR5Q9BXR6 569 aa12.41□□□□□ -0.42
HNRNPC-208ENST00000553753 TBC1D12O60347 775 aa12.4□□□□□ -0.42
HNRNPC-208ENST00000553753 PPATQ06203 517 aa12.4□□□□□ -0.42
HNRNPC-208ENST00000553753 NOL9Q5SY16 702 aaKnown RBP12.4□□□□□ -0.42
HNRNPC-208ENST00000553753 SLC9C2Q5TAH2 1124 aa12.4□□□□□ -0.42
HNRNPC-208ENST00000553753 MIGA1Q8NAN2 632 aa12.4□□□□□ -0.42
HNRNPC-208ENST00000553753 HAUS7Q99871 368 aa12.4□□□□□ -0.42
HNRNPC-208ENST00000553753 PTPN18Q99952 460 aa12.4□□□□□ -0.42
HNRNPC-208ENST00000553753 DHX36Q9H2U1 1008 aaKnown RBP12.4□□□□□ -0.42
HNRNPC-208ENST00000553753 PAG1Q9NWQ8 432 aa12.4□□□□□ -0.42
HNRNPC-208ENST00000553753 LAMB1P07942 1786 aa12.39□□□□□ -0.43
HNRNPC-208ENST00000553753 COL2A1P02458 1487 aaPredicted RBP12.39□□□□□ -0.43
HNRNPC-208ENST00000553753 SLURP2P0DP57 97 aa12.39□□□□□ -0.43
HNRNPC-208ENST00000553753 DYNLL1P63167 89 aaKnown RBP12.39□□□□□ -0.43
HNRNPC-208ENST00000553753 PPIL2Q13356 520 aa12.39□□□□□ -0.43
HNRNPC-208ENST00000553753 AAMPQ13685 434 aa12.39□□□□□ -0.43
HNRNPC-208ENST00000553753 MAPKAPK5Q8IW41 473 aa12.39□□□□□ -0.43
HNRNPC-208ENST00000553753 EDC3Q96F86 508 aaKnown RBP12.39□□□□□ -0.43
HNRNPC-208ENST00000553753 ECHDC1Q9NTX5 307 aa12.39□□□□□ -0.43
HNRNPC-208ENST00000553753 PI4KBQ9UBF8 816 aa12.39□□□□□ -0.43
HNRNPC-208ENST00000553753 DOCK2Q92608 1830 aa12.39□□□□□ -0.43
HNRNPC-208ENST00000553753 FLT1P17948 1338 aa12.39□□□□□ -0.43
HNRNPC-208ENST00000553753 CCL15-CCL14A0A0B4J2E2 113 aa12.38□□□□□ -0.43
HNRNPC-208ENST00000553753 CTNND1O60716 968 aaKnown RBP12.38□□□□□ -0.43
HNRNPC-208ENST00000553753 SNAPC2Q13487 334 aa12.38□□□□□ -0.43
HNRNPC-208ENST00000553753 CCL15Q16663 113 aa12.38□□□□□ -0.43
HNRNPC-208ENST00000553753 NOM1Q5C9Z4 860 aaKnown RBP12.38□□□□□ -0.43
HNRNPC-208ENST00000553753 BRI3BPQ8WY22 251 aa12.38□□□□□ -0.43
HNRNPC-208ENST00000553753 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.38□□□□□ -0.43
HNRNPC-208ENST00000553753 GPR25O00155 361 aa12.38□□□□□ -0.43
HNRNPC-208ENST00000553753 CETPP11597 493 aa12.38□□□□□ -0.43
HNRNPC-208ENST00000553753 PDE6AP16499 860 aa12.38□□□□□ -0.43
HNRNPC-208ENST00000553753 SCYL3Q8IZE3 742 aa12.38□□□□□ -0.43
HNRNPC-208ENST00000553753 ZNF296Q8WUU4 475 aaPredicted RBP12.38□□□□□ -0.43
HNRNPC-208ENST00000553753 GPATCH3Q96I76 525 aa12.38□□□□□ -0.43
HNRNPC-208ENST00000553753 R3HDMLQ9H3Y0 253 aa12.38□□□□□ -0.43
HNRNPC-208ENST00000553753 PICK1Q9NRD5 415 aa12.38□□□□□ -0.43
HNRNPC-208ENST00000553753 HERC5Q9UII4 1024 aaKnown RBP12.38□□□□□ -0.43
HNRNPC-208ENST00000553753 PALD1Q9ULE6 856 aa12.38□□□□□ -0.43
HNRNPC-208ENST00000553753 SUPT16HQ9Y5B9 1047 aaKnown RBP12.38□□□□□ -0.43
HNRNPC-208ENST00000553753 ZNF532Q9HCE3 1301 aa12.37□□□□□ -0.43
HNRNPC-208ENST00000553753 FAM196BA6NMK8 535 aa12.37□□□□□ -0.43
HNRNPC-208ENST00000553753 USP5P45974 858 aa12.37□□□□□ -0.43
HNRNPC-208ENST00000553753 HDAC1Q13547 482 aaPredicted RBP12.37□□□□□ -0.43
HNRNPC-208ENST00000553753 RIOK1Q9BRS2 568 aaKnown RBP12.37□□□□□ -0.43
HNRNPC-208ENST00000553753 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.37□□□□□ -0.43
HNRNPC-208ENST00000553753 CENPFP49454 3210 aa12.37□□□□□ -0.43
HNRNPC-208ENST00000553753 MAGEB6P1A0A0J9YX57 407 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms