RNA–Protein interactions for RNA: ENST00000553527.1

TDP1-205, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-205ENST00000553527 SAGE1Q9NXZ1 904 aa28.78■■■□□ 2.2
TDP1-205ENST00000553527 AATFQ9NY61 560 aaKnown RBP eCLIP28.78■■■□□ 2.2
TDP1-205ENST00000553527 LRRCC1Q9C099 1032 aa28.77■■■□□ 2.2
TDP1-205ENST00000553527 MAST2Q6P0Q8 1798 aa28.76■■■□□ 2.19
TDP1-205ENST00000553527 MANSC4A6NHS7 340 aaPredicted RBP28.76■■■□□ 2.19
TDP1-205ENST00000553527 TBC1D8O95759 1140 aa28.76■■■□□ 2.19
TDP1-205ENST00000553527 SH3RF3Q8TEJ3 882 aaPredicted RBP28.76■■■□□ 2.19
TDP1-205ENST00000553527 PCDHB15Q9Y5E8 787 aa28.76■■■□□ 2.19
TDP1-205ENST00000553527 DOCK2Q92608 1830 aa28.76■■■□□ 2.19
TDP1-205ENST00000553527 BAG3O95817 575 aa28.75■■■□□ 2.19
TDP1-205ENST00000553527 IFFO2Q5TF58 517 aa28.75■■■□□ 2.19
TDP1-205ENST00000553527 SH3BP5LQ7L8J4 393 aa28.75■■■□□ 2.19
TDP1-205ENST00000553527 ADGRA1Q86SQ6 560 aa28.75■■■□□ 2.19
TDP1-205ENST00000553527 TEX11Q8IYF3 940 aa28.75■■■□□ 2.19
TDP1-205ENST00000553527 OTUD5Q96G74 571 aa28.75■■■□□ 2.19
TDP1-205ENST00000553527 DDTLA6NHG4 134 aaPredicted RBP28.74■■■□□ 2.19
TDP1-205ENST00000553527 CYP7A1P22680 504 aa28.74■■■□□ 2.19
TDP1-205ENST00000553527 INPP5BP32019 993 aa28.74■■■□□ 2.19
TDP1-205ENST00000553527 EXOC6Q8TAG9 804 aa28.74■■■□□ 2.19
TDP1-205ENST00000553527 DNAJC2Q99543 621 aaKnown RBP28.74■■■□□ 2.19
TDP1-205ENST00000553527 SLURP2P0DP57 97 aa28.73■■■□□ 2.19
TDP1-205ENST00000553527 MAGEB6Q8N7X4 407 aa28.73■■■□□ 2.19
TDP1-205ENST00000553527 SNCAIPQ9Y6H5 919 aa28.73■■■□□ 2.19
TDP1-205ENST00000553527 INHBEP58166 350 aa28.72■■■□□ 2.19
TDP1-205ENST00000553527 DCTPP1Q9H773 170 aa28.72■■■□□ 2.19
TDP1-205ENST00000553527 RFX7Q2KHR2 1363 aa28.72■■■□□ 2.19
TDP1-205ENST00000553527 MAP3K12Q12852 859 aa28.71■■■□□ 2.19
TDP1-205ENST00000553527 AAMPQ13685 434 aa28.71■■■□□ 2.19
TDP1-205ENST00000553527 IFNL1Q8IU54 200 aa28.71■■■□□ 2.19
TDP1-205ENST00000553527 BOLA2Q9H3K6 86 aa28.71■■■□□ 2.19
TDP1-205ENST00000553527 CDK5RAP2Q96SN8 1893 aa28.7■■■□□ 2.19
TDP1-205ENST00000553527 GOLIM4O00461 696 aa28.7■■■□□ 2.18
TDP1-205ENST00000553527 CAPN15O75808 1086 aa28.7■■■□□ 2.18
TDP1-205ENST00000553527 MAP4K4O95819 1239 aaPredicted RBP28.7■■■□□ 2.18
TDP1-205ENST00000553527 DYNLL1P63167 89 aaKnown RBP28.7■■■□□ 2.18
TDP1-205ENST00000553527 MIGA1Q8NAN2 632 aa28.7■■■□□ 2.18
TDP1-205ENST00000553527 PLCG2P16885 1265 aa28.69■■■□□ 2.18
TDP1-205ENST00000553527 PPP4CP60510 307 aa28.69■■■□□ 2.18
TDP1-205ENST00000553527 TTF1Q15361 905 aaPredicted RBP28.69■■■□□ 2.18
TDP1-205ENST00000553527 ERO1BQ86YB8 467 aa28.69■■■□□ 2.18
TDP1-205ENST00000553527 TGFBRAP1Q8WUH2 860 aa28.69■■■□□ 2.18
TDP1-205ENST00000553527 EDC3Q96F86 508 aaKnown RBP28.69■■■□□ 2.18
TDP1-205ENST00000553527 SPDYE5A6NIY4 337 aa28.68■■■□□ 2.18
TDP1-205ENST00000553527 IGF2BP3O00425 579 aaKnown RBP eCLIP28.68■■■□□ 2.18
TDP1-205ENST00000553527 OSBPL5Q9H0X9 879 aaPredicted RBP28.68■■■□□ 2.18
TDP1-205ENST00000553527 ZNF112Q9UJU3 913 aa28.68■■■□□ 2.18
TDP1-205ENST00000553527 MAPKAPK5Q8IW41 473 aa28.67■■■□□ 2.18
TDP1-205ENST00000553527 PPIL4Q8WUA2 492 aaKnown RBP eCLIP28.67■■■□□ 2.18
TDP1-205ENST00000553527 MS4A4AQ96JQ5 239 aa28.67■■■□□ 2.18
TDP1-205ENST00000553527 LAMB1P07942 1786 aa28.67■■■□□ 2.18
TDP1-205ENST00000553527 FAM196BA6NMK8 535 aa28.66■■■□□ 2.18
TDP1-205ENST00000553527 IGSF3O75054 1194 aa28.66■■■□□ 2.18
TDP1-205ENST00000553527 NPM3O75607 178 aaKnown RBP28.66■■■□□ 2.18
TDP1-205ENST00000553527 NEFLP07196 543 aa28.66■■■□□ 2.18
TDP1-205ENST00000553527 GTF2A2P52657 109 aa28.66■■■□□ 2.18
TDP1-205ENST00000553527 PTPN18Q99952 460 aa28.66■■■□□ 2.18
TDP1-205ENST00000553527 R3HDMLQ9H3Y0 253 aa28.66■■■□□ 2.18
TDP1-205ENST00000553527 CCL15-CCL14A0A0B4J2E2 113 aa28.65■■■□□ 2.18
TDP1-205ENST00000553527 IRF6O14896 467 aa28.65■■■□□ 2.18
TDP1-205ENST00000553527 ALDH1A1P00352 501 aa28.65■■■□□ 2.18
TDP1-205ENST00000553527 ATP5JP18859 108 aa28.65■■■□□ 2.18
TDP1-205ENST00000553527 CCL15Q16663 113 aa28.65■■■□□ 2.18
TDP1-205ENST00000553527 SLC9C2Q5TAH2 1124 aa28.65■■■□□ 2.18
TDP1-205ENST00000553527 OTUD7BQ6GQQ9 843 aa28.65■■■□□ 2.18
TDP1-205ENST00000553527 ATRNL1Q5VV63 1379 aa28.64■■■□□ 2.18
TDP1-205ENST00000553527 PHF20L1A8MW92 1017 aa28.64■■■□□ 2.18
TDP1-205ENST00000553527 XPO5Q9HAV4 1204 aaKnown RBP eCLIP28.64■■■□□ 2.18
TDP1-205ENST00000553527 PAG1Q9NWQ8 432 aa28.64■■■□□ 2.18
TDP1-205ENST00000553527 FOCADQ5VW36 1801 aa28.64■■■□□ 2.17
TDP1-205ENST00000553527 TESPA1A2RU30 521 aaPredicted RBP28.63■■■□□ 2.17
TDP1-205ENST00000553527 BRI3BPQ8WY22 251 aa28.63■■■□□ 2.17
TDP1-205ENST00000553527 SAP30BPQ9UHR5 308 aaKnown RBP28.63■■■□□ 2.17
TDP1-205ENST00000553527 PPATQ06203 517 aa28.62■■■□□ 2.17
TDP1-205ENST00000553527 PPIL2Q13356 520 aa28.62■■■□□ 2.17
TDP1-205ENST00000553527 DGKZQ13574 1117 aa28.62■■■□□ 2.17
TDP1-205ENST00000553527 SLC4A8Q2Y0W8 1093 aa28.62■■■□□ 2.17
TDP1-205ENST00000553527 ZNF296Q8WUU4 475 aaPredicted RBP28.62■■■□□ 2.17
TDP1-205ENST00000553527 MYH1P12882 1939 aa28.61■■■□□ 2.17
TDP1-205ENST00000553527 GPR25O00155 361 aa28.61■■■□□ 2.17
TDP1-205ENST00000553527 PDE6AP16499 860 aa28.61■■■□□ 2.17
TDP1-205ENST00000553527 USP5P45974 858 aa28.61■■■□□ 2.17
TDP1-205ENST00000553527 MAP3K10Q02779 954 aa28.61■■■□□ 2.17
TDP1-205ENST00000553527 SNAPC2Q13487 334 aa28.61■■■□□ 2.17
TDP1-205ENST00000553527 HAUS7Q99871 368 aa28.61■■■□□ 2.17
TDP1-205ENST00000553527 PICK1Q9NRD5 415 aa28.61■■■□□ 2.17
TDP1-205ENST00000553527 PALD1Q9ULE6 856 aa28.61■■■□□ 2.17
TDP1-205ENST00000553527 FLT1P17948 1338 aa28.61■■■□□ 2.17
TDP1-205ENST00000553527 CETPP11597 493 aa28.6■■■□□ 2.17
TDP1-205ENST00000553527 NOL9Q5SY16 702 aaKnown RBP28.6■■■□□ 2.17
TDP1-205ENST00000553527 TSHZ3Q63HK5 1081 aa28.6■■■□□ 2.17
TDP1-205ENST00000553527 SCYL3Q8IZE3 742 aa28.6■■■□□ 2.17
TDP1-205ENST00000553527 ECHDC1Q9NTX5 307 aa28.6■■■□□ 2.17
TDP1-205ENST00000553527 ZNF532Q9HCE3 1301 aa28.6■■■□□ 2.17
TDP1-205ENST00000553527 MAGEB6P1A0A0J9YX57 407 aa28.59■■■□□ 2.17
TDP1-205ENST00000553527 TBC1D12O60347 775 aa28.59■■■□□ 2.17
TDP1-205ENST00000553527 DHX36Q9H2U1 1008 aaKnown RBP28.59■■■□□ 2.17
TDP1-205ENST00000553527 PI4KBQ9UBF8 816 aa28.59■■■□□ 2.17
TDP1-205ENST00000553527 ZHX2Q9Y6X8 837 aa28.59■■■□□ 2.17
TDP1-205ENST00000553527 CTNND1O60716 968 aaKnown RBP28.58■■■□□ 2.17
TDP1-205ENST00000553527 CRHR2Q13324 411 aa28.58■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms