RNA–Protein interactions for RNA: ENST00000553391.2

MTHFD1-203, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-203ENST00000553391 METAP2P50579 478 aaKnown RBP eCLIP10.97□□□□□ -0.65
MTHFD1-203ENST00000553391 RCAN1P53805 252 aa10.97□□□□□ -0.65
MTHFD1-203ENST00000553391 GSTO1P78417 241 aa10.97□□□□□ -0.65
MTHFD1-203ENST00000553391 GRIK5Q16478 980 aa10.97□□□□□ -0.65
MTHFD1-203ENST00000553391 GPR101Q96P66 508 aaPredicted RBP10.97□□□□□ -0.65
MTHFD1-203ENST00000553391 CFAP45Q9UL16 551 aa10.97□□□□□ -0.65
MTHFD1-203ENST00000553391 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.97□□□□□ -0.65
MTHFD1-203ENST00000553391 ATP6V0A2Q9Y487 856 aa10.97□□□□□ -0.65
MTHFD1-203ENST00000553391 C4AP0C0L4 1744 aa10.97□□□□□ -0.65
MTHFD1-203ENST00000553391 CACNA1SQ13698 1873 aa10.96□□□□□ -0.65
MTHFD1-203ENST00000553391 TNRC6CQ9HCJ0 1690 aaKnown RBP10.96□□□□□ -0.65
MTHFD1-203ENST00000553391 NID2Q14112 1375 aa10.96□□□□□ -0.65
MTHFD1-203ENST00000553391 FAM205AQ6ZU69 1335 aa10.96□□□□□ -0.65
MTHFD1-203ENST00000553391 CYP2D7A0A087X1C5 515 aa10.96□□□□□ -0.65
MTHFD1-203ENST00000553391 SYCE3A1L190 88 aa10.96□□□□□ -0.65
MTHFD1-203ENST00000553391 CCDC69A6NI79 296 aa10.96□□□□□ -0.65
MTHFD1-203ENST00000553391 CPLX1O14810 134 aa10.96□□□□□ -0.65
MTHFD1-203ENST00000553391 CDKL5O76039 1030 aa10.96□□□□□ -0.65
MTHFD1-203ENST00000553391 UFL1O94874 794 aa10.96□□□□□ -0.65
MTHFD1-203ENST00000553391 IFNAR1P17181 557 aa10.96□□□□□ -0.65
MTHFD1-203ENST00000553391 ALDH1B1P30837 517 aa10.96□□□□□ -0.65
MTHFD1-203ENST00000553391 PDE6BP35913 854 aa10.96□□□□□ -0.65
MTHFD1-203ENST00000553391 WTAPQ15007 396 aa10.96□□□□□ -0.65
MTHFD1-203ENST00000553391 PPP2R5BQ15173 497 aa10.96□□□□□ -0.65
MTHFD1-203ENST00000553391 RRP12Q5JTH9 1297 aaKnown RBP10.96□□□□□ -0.65
MTHFD1-203ENST00000553391 CCDC183Q5T5S1 534 aa10.96□□□□□ -0.65
MTHFD1-203ENST00000553391 OTUD7BQ6GQQ9 843 aa10.96□□□□□ -0.65
MTHFD1-203ENST00000553391 CPLX2Q6PUV4 134 aaKnown RBP10.96□□□□□ -0.65
MTHFD1-203ENST00000553391 SYNE3Q6ZMZ3 975 aa10.96□□□□□ -0.65
MTHFD1-203ENST00000553391 NFXL1Q6ZNB6 911 aa10.96□□□□□ -0.65
MTHFD1-203ENST00000553391 ILDR1Q86SU0 546 aaPredicted RBP10.96□□□□□ -0.65
MTHFD1-203ENST00000553391 RAB11FIP4Q86YS3 637 aa10.96□□□□□ -0.65
MTHFD1-203ENST00000553391 ESR2Q92731 530 aa10.96□□□□□ -0.65
MTHFD1-203ENST00000553391 PGBD1Q96JS3 809 aa10.96□□□□□ -0.65
MTHFD1-203ENST00000553391 C8orf76Q96K31 380 aa10.96□□□□□ -0.65
MTHFD1-203ENST00000553391 SPATA32Q96LK8 384 aa10.96□□□□□ -0.65
MTHFD1-203ENST00000553391 ZNF396Q96N95 335 aaPredicted RBP10.96□□□□□ -0.65
MTHFD1-203ENST00000553391 AATFQ9NY61 560 aaKnown RBP eCLIP10.96□□□□□ -0.65
MTHFD1-203ENST00000553391 SLC12A7Q9Y666 1083 aa10.96□□□□□ -0.65
MTHFD1-203ENST00000553391 A0A1B0GUL6 1792 aa10.95□□□□□ -0.66
MTHFD1-203ENST00000553391 GPR75-ASB3A0A0A6YYF3 556 aa10.95□□□□□ -0.66
MTHFD1-203ENST00000553391 GOLGA8AA7E2F4 631 aa10.95□□□□□ -0.66
MTHFD1-203ENST00000553391 PPFIA3O75145 1194 aa10.95□□□□□ -0.66
MTHFD1-203ENST00000553391 NT5C2P49902 561 aa10.95□□□□□ -0.66
MTHFD1-203ENST00000553391 GUCY1B3Q02153 619 aa10.95□□□□□ -0.66
MTHFD1-203ENST00000553391 SART3Q15020 963 aaKnown RBP10.95□□□□□ -0.66
MTHFD1-203ENST00000553391 C12orf60Q5U649 245 aa10.95□□□□□ -0.66
MTHFD1-203ENST00000553391 POTEAQ6S8J7 498 aa10.95□□□□□ -0.66
MTHFD1-203ENST00000553391 CAMKK2Q96RR4 588 aa10.95□□□□□ -0.66
MTHFD1-203ENST00000553391 PANK2Q9BZ23 570 aa10.95□□□□□ -0.66
MTHFD1-203ENST00000553391 RTEL1Q9NZ71 1219 aa10.95□□□□□ -0.66
MTHFD1-203ENST00000553391 JAG2Q9Y219 1238 aa10.95□□□□□ -0.66
MTHFD1-203ENST00000553391 PARP3Q9Y6F1 533 aa10.95□□□□□ -0.66
MTHFD1-203ENST00000553391 STK36Q9NRP7 1315 aa10.94□□□□□ -0.66
MTHFD1-203ENST00000553391 ERICH2A1L162 156 aa10.94□□□□□ -0.66
MTHFD1-203ENST00000553391 PPEF1O14829 653 aaPredicted RBP10.94□□□□□ -0.66
MTHFD1-203ENST00000553391 RANBP6O60518 1105 aaKnown RBP10.94□□□□□ -0.66
MTHFD1-203ENST00000553391 FMNL1O95466 1100 aaPredicted RBP10.94□□□□□ -0.66
MTHFD1-203ENST00000553391 BAG3O95817 575 aa10.94□□□□□ -0.66
MTHFD1-203ENST00000553391 MMP10P09238 476 aa10.94□□□□□ -0.66
MTHFD1-203ENST00000553391 IARSP41252 1262 aaKnown RBP10.94□□□□□ -0.66
MTHFD1-203ENST00000553391 SSRP1Q08945 709 aaKnown RBP10.94□□□□□ -0.66
MTHFD1-203ENST00000553391 NBPF11Q86T75 865 aa10.94□□□□□ -0.66
MTHFD1-203ENST00000553391 DZIP1Q86YF9 867 aaKnown RBP10.94□□□□□ -0.66
MTHFD1-203ENST00000553391 STK11IPQ8N1F8 1099 aa10.94□□□□□ -0.66
MTHFD1-203ENST00000553391 CRACR2BQ8N4Y2 399 aaPredicted RBP10.94□□□□□ -0.66
MTHFD1-203ENST00000553391 FANCBQ8NB91 859 aa10.94□□□□□ -0.66
MTHFD1-203ENST00000553391 ANKS1AQ92625 1134 aa10.94□□□□□ -0.66
MTHFD1-203ENST00000553391 MASTLQ96GX5 879 aa10.94□□□□□ -0.66
MTHFD1-203ENST00000553391 USP28Q96RU2 1077 aa10.94□□□□□ -0.66
MTHFD1-203ENST00000553391 ZSCAN10Q96SZ4 725 aaPredicted RBP10.94□□□□□ -0.66
MTHFD1-203ENST00000553391 ZKSCAN3Q9BRR0 538 aa10.94□□□□□ -0.66
MTHFD1-203ENST00000553391 ALG1Q9BT22 464 aa10.94□□□□□ -0.66
MTHFD1-203ENST00000553391 COA1Q9GZY4 146 aa10.94□□□□□ -0.66
MTHFD1-203ENST00000553391 TOMM22Q9NS69 142 aa10.94□□□□□ -0.66
MTHFD1-203ENST00000553391 CCDC196A0A1B0GTZ2 297 aa10.93□□□□□ -0.66
MTHFD1-203ENST00000553391 C6orf229H3BNL8 230 aa10.93□□□□□ -0.66
MTHFD1-203ENST00000553391 SLC3A2P08195 630 aaKnown RBP10.93□□□□□ -0.66
MTHFD1-203ENST00000553391 CYP2D6P10635 497 aa10.93□□□□□ -0.66
MTHFD1-203ENST00000553391 LIG1P18858 919 aa10.93□□□□□ -0.66
MTHFD1-203ENST00000553391 RXRAP19793 462 aa10.93□□□□□ -0.66
MTHFD1-203ENST00000553391 FOSBP53539 338 aa10.93□□□□□ -0.66
MTHFD1-203ENST00000553391 KRT40Q6A162 431 aa10.93□□□□□ -0.66
MTHFD1-203ENST00000553391 BRAPQ7Z569 592 aa10.93□□□□□ -0.66
MTHFD1-203ENST00000553391 CERS3Q8IU89 383 aa10.93□□□□□ -0.66
MTHFD1-203ENST00000553391 ZNF654Q8IZM8 581 aa10.93□□□□□ -0.66
MTHFD1-203ENST00000553391 MPNDQ8N594 471 aa10.93□□□□□ -0.66
MTHFD1-203ENST00000553391 SH3RF3Q8TEJ3 882 aaPredicted RBP10.93□□□□□ -0.66
MTHFD1-203ENST00000553391 TBC1D22AQ8WUA7 517 aa10.93□□□□□ -0.66
MTHFD1-203ENST00000553391 PPP1R9BQ96SB3 815 aa10.93□□□□□ -0.66
MTHFD1-203ENST00000553391 FUCA2Q9BTY2 467 aa10.93□□□□□ -0.66
MTHFD1-203ENST00000553391 MYL10Q9BUA6 226 aa10.93□□□□□ -0.66
MTHFD1-203ENST00000553391 RTFDC1Q9BY42 306 aaPredicted RBP10.93□□□□□ -0.66
MTHFD1-203ENST00000553391 TSPY26PQ9H489 355 aa10.93□□□□□ -0.66
MTHFD1-203ENST00000553391 ARPP21Q9UBL0 812 aaPredicted RBP10.93□□□□□ -0.66
MTHFD1-203ENST00000553391 TCHHQ07283 1943 aa10.92□□□□□ -0.66
MTHFD1-203ENST00000553391 MROH7-TTC4A0A0A0MT08 1334 aa10.92□□□□□ -0.66
MTHFD1-203ENST00000553391 USP17L8P0C7I0 530 aa10.92□□□□□ -0.66
MTHFD1-203ENST00000553391 KIF23Q02241 960 aaPredicted RBP10.92□□□□□ -0.66
MTHFD1-203ENST00000553391 EVX2Q03828 476 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms