RNA–Protein interactions for RNA: ENST00000553335.5

TMEM260-204, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 560 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-204ENST00000553335 PUS7LQ9H0K6 701 aaKnown RBP11.69□□□□□ -0.54
TMEM260-204ENST00000553335 MYOZ2Q9NPC6 264 aa11.69□□□□□ -0.54
TMEM260-204ENST00000553335 AATFQ9NY61 560 aaKnown RBP eCLIP11.69□□□□□ -0.54
TMEM260-204ENST00000553335 GPRC5DQ9NZD1 345 aa11.69□□□□□ -0.54
TMEM260-204ENST00000553335 DAGLAQ9Y4D2 1042 aa11.69□□□□□ -0.54
TMEM260-204ENST00000553335 A0A0D9SFI3 127 aa11.68□□□□□ -0.54
TMEM260-204ENST00000553335 IQCA1LA6NCM1 817 aa11.68□□□□□ -0.54
TMEM260-204ENST00000553335 MYO1BO43795 1136 aa11.68□□□□□ -0.54
TMEM260-204ENST00000553335 CHGBP05060 677 aa11.68□□□□□ -0.54
TMEM260-204ENST00000553335 GNAT2P19087 354 aa11.68□□□□□ -0.54
TMEM260-204ENST00000553335 PPP4CP60510 307 aa11.68□□□□□ -0.54
TMEM260-204ENST00000553335 CAMK2BQ13554 666 aa11.68□□□□□ -0.54
TMEM260-204ENST00000553335 SLFNL1Q499Z3 407 aa11.68□□□□□ -0.54
TMEM260-204ENST00000553335 ADGRA1Q86SQ6 560 aa11.68□□□□□ -0.54
TMEM260-204ENST00000553335 MIGA1Q8NAN2 632 aa11.68□□□□□ -0.54
TMEM260-204ENST00000553335 OSBP2Q969R2 916 aa11.68□□□□□ -0.54
TMEM260-204ENST00000553335 L3MBTL3Q96JM7 780 aaPredicted RBP11.68□□□□□ -0.54
TMEM260-204ENST00000553335 SEC62Q99442 399 aaKnown RBP11.68□□□□□ -0.54
TMEM260-204ENST00000553335 ADARB2Q9NS39 739 aaKnown RBP11.68□□□□□ -0.54
TMEM260-204ENST00000553335 HACL1Q9UJ83 578 aa11.68□□□□□ -0.54
TMEM260-204ENST00000553335 MYH1P12882 1939 aa11.68□□□□□ -0.54
TMEM260-204ENST00000553335 CCDC171Q6TFL3 1326 aa11.67□□□□□ -0.54
TMEM260-204ENST00000553335 M0R2C6 588 aa11.67□□□□□ -0.54
TMEM260-204ENST00000553335 SGSM2O43147 1006 aa11.67□□□□□ -0.54
TMEM260-204ENST00000553335 GPAA1O43292 621 aa11.67□□□□□ -0.54
TMEM260-204ENST00000553335 MBD4O95243 580 aa11.67□□□□□ -0.54
TMEM260-204ENST00000553335 DYNLL1P63167 89 aaKnown RBP11.67□□□□□ -0.54
TMEM260-204ENST00000553335 RBM26Q5T8P6 1007 aaKnown RBP11.67□□□□□ -0.54
TMEM260-204ENST00000553335 KIAA1211Q6ZU35 1233 aa11.67□□□□□ -0.54
TMEM260-204ENST00000553335 ESYT1Q9BSJ8 1104 aa11.67□□□□□ -0.54
TMEM260-204ENST00000553335 ARMT1Q9H993 441 aa11.67□□□□□ -0.54
TMEM260-204ENST00000553335 TMOD2Q9NZR1 351 aa11.67□□□□□ -0.54
TMEM260-204ENST00000553335 NAV1Q8NEY1 1877 aa11.67□□□□□ -0.54
TMEM260-204ENST00000553335 HAX1O00165 279 aa11.66□□□□□ -0.54
TMEM260-204ENST00000553335 EPS15P42566 896 aa11.66□□□□□ -0.54
TMEM260-204ENST00000553335 KIF4BQ2VIQ3 1234 aa11.66□□□□□ -0.54
TMEM260-204ENST00000553335 TBC1D10BQ4KMP7 808 aaPredicted RBP11.66□□□□□ -0.54
TMEM260-204ENST00000553335 APOBEC3HQ6NTF7 200 aaKnown RBP11.66□□□□□ -0.54
TMEM260-204ENST00000553335 SAMD7Q7Z3H4 446 aa11.66□□□□□ -0.54
TMEM260-204ENST00000553335 LCORLQ8N3X6 602 aa11.66□□□□□ -0.54
TMEM260-204ENST00000553335 DDRGK1Q96HY6 314 aa11.66□□□□□ -0.54
TMEM260-204ENST00000553335 PRMT6Q96LA8 375 aaPredicted RBP11.66□□□□□ -0.54
TMEM260-204ENST00000553335 RIOK1Q9BRS2 568 aaKnown RBP11.66□□□□□ -0.54
TMEM260-204ENST00000553335 CRNKL1Q9BZJ0 848 aaKnown RBP11.66□□□□□ -0.54
TMEM260-204ENST00000553335 USP40Q9NVE5 1235 aa11.66□□□□□ -0.54
TMEM260-204ENST00000553335 SLC4A4Q9Y6R1 1079 aa11.66□□□□□ -0.54
TMEM260-204ENST00000553335 RPAP1Q9BWH6 1393 aaPredicted RBP11.66□□□□□ -0.54
TMEM260-204ENST00000553335 BAZ2AQ9UIF9 1905 aaKnown RBP11.65□□□□□ -0.54
TMEM260-204ENST00000553335 SHTN1A0MZ66 631 aa11.65□□□□□ -0.54
TMEM260-204ENST00000553335 WNT10BO00744 389 aa11.65□□□□□ -0.54
TMEM260-204ENST00000553335 REC8O95072 547 aa11.65□□□□□ -0.54
TMEM260-204ENST00000553335 USP5P45974 858 aa11.65□□□□□ -0.54
TMEM260-204ENST00000553335 C8orf34Q49A92 452 aa11.65□□□□□ -0.54
TMEM260-204ENST00000553335 CCDC129Q6ZRS4 1044 aa11.65□□□□□ -0.54
TMEM260-204ENST00000553335 USP50Q70EL3 339 aaPredicted RBP11.65□□□□□ -0.54
TMEM260-204ENST00000553335 TEX11Q8IYF3 940 aa11.65□□□□□ -0.54
TMEM260-204ENST00000553335 SH3RF3Q8TEJ3 882 aaPredicted RBP11.65□□□□□ -0.54
TMEM260-204ENST00000553335 ZBED3Q96IU2 234 aaPredicted RBP11.65□□□□□ -0.54
TMEM260-204ENST00000553335 STRBPQ96SI9 672 aaKnown RBP11.65□□□□□ -0.54
TMEM260-204ENST00000553335 TDRD3Q9H7E2 651 aaKnown RBP11.65□□□□□ -0.54
TMEM260-204ENST00000553335 GPHNQ9NQX3 736 aaPredicted RBP11.65□□□□□ -0.54
TMEM260-204ENST00000553335 PATL2C9JE40 543 aaKnown RBP11.64□□□□□ -0.55
TMEM260-204ENST00000553335 APPP05067 770 aa11.64□□□□□ -0.55
TMEM260-204ENST00000553335 EPHX2P34913 555 aa11.64□□□□□ -0.55
TMEM260-204ENST00000553335 TNNI2P48788 182 aa11.64□□□□□ -0.55
TMEM260-204ENST00000553335 NBPF9Q3BBW0 867 aa11.64□□□□□ -0.55
TMEM260-204ENST00000553335 SMYD5Q6GMV2 418 aa11.64□□□□□ -0.55
TMEM260-204ENST00000553335 CDC42EP5Q6NZY7 148 aa11.64□□□□□ -0.55
TMEM260-204ENST00000553335 ZNF589Q86UQ0 364 aaPredicted RBP11.64□□□□□ -0.55
TMEM260-204ENST00000553335 PNMA8AQ86V59 439 aaPredicted RBP11.64□□□□□ -0.55
TMEM260-204ENST00000553335 NACAP1Q9BZK3 213 aa11.64□□□□□ -0.55
TMEM260-204ENST00000553335 ANO2Q9NQ90 1003 aa11.64□□□□□ -0.55
TMEM260-204ENST00000553335 ATP8A2Q9NTI2 1148 aa11.64□□□□□ -0.55
TMEM260-204ENST00000553335 PCDHAC2Q9Y5I4 1007 aa11.64□□□□□ -0.55
TMEM260-204ENST00000553335 POLR2AP24928 1970 aaKnown RBP11.64□□□□□ -0.55
TMEM260-204ENST00000553335 LAMB1P07942 1786 aa11.64□□□□□ -0.55
TMEM260-204ENST00000553335 EPB41L2O43491 1005 aaKnown RBP11.63□□□□□ -0.55
TMEM260-204ENST00000553335 HSPD1P10809 573 aaKnown RBP11.63□□□□□ -0.55
TMEM260-204ENST00000553335 VEGFAP15692 232 aaPredicted RBP11.63□□□□□ -0.55
TMEM260-204ENST00000553335 RHBDL3P58872 404 aa11.63□□□□□ -0.55
TMEM260-204ENST00000553335 TNFAIP1Q13829 316 aa11.63□□□□□ -0.55
TMEM260-204ENST00000553335 GIMAP6Q6P9H5 292 aa11.63□□□□□ -0.55
TMEM260-204ENST00000553335 AMOTL1Q8IY63 956 aa11.63□□□□□ -0.55
TMEM260-204ENST00000553335 IFNL3Q8IZI9 196 aa11.63□□□□□ -0.55
TMEM260-204ENST00000553335 TRPM4Q8TD43 1214 aa11.63□□□□□ -0.55
TMEM260-204ENST00000553335 TGFBRAP1Q8WUH2 860 aa11.63□□□□□ -0.55
TMEM260-204ENST00000553335 DSCC1Q9BVC3 393 aa11.63□□□□□ -0.55
TMEM260-204ENST00000553335 IDI2Q9BXS1 227 aa11.63□□□□□ -0.55
TMEM260-204ENST00000553335 RRAGCQ9HB90 399 aa11.63□□□□□ -0.55
TMEM260-204ENST00000553335 VEZTQ9HBM0 779 aa11.63□□□□□ -0.55
TMEM260-204ENST00000553335 ZNF70Q9UC06 446 aaPredicted RBP11.63□□□□□ -0.55
TMEM260-204ENST00000553335 LAMA4Q16363 1823 aa11.63□□□□□ -0.55
TMEM260-204ENST00000553335 MYH8P13535 1937 aa11.62□□□□□ -0.55
TMEM260-204ENST00000553335 CLRN2A0PK11 232 aa11.62□□□□□ -0.55
TMEM260-204ENST00000553335 POTECB2RU33 542 aa11.62□□□□□ -0.55
TMEM260-204ENST00000553335 PRKAB2O43741 272 aa11.62□□□□□ -0.55
TMEM260-204ENST00000553335 EGFRP00533 1210 aa11.62□□□□□ -0.55
TMEM260-204ENST00000553335 TDO2P48775 406 aa11.62□□□□□ -0.55
TMEM260-204ENST00000553335 PICALMQ13492 652 aa11.62□□□□□ -0.55
TMEM260-204ENST00000553335 FKBP1CQ5VVH2 108 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms