RNA–Protein interactions for RNA: ENST00000553065.1

DDX23-217, Transcript of DEAD-box helicase 23, humanhuman

TSL 2

Gene DDX23, Length 336 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX23-217ENST00000553065 GPR108Q9NPR9 543 aa13.05□□□□□ -0.32
DDX23-217ENST00000553065 SNRKQ9NRH2 765 aa13.05□□□□□ -0.32
DDX23-217ENST00000553065 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.05□□□□□ -0.32
DDX23-217ENST00000553065 FPGT-TNNI3KV9GXZ4 949 aa13.05□□□□□ -0.32
DDX23-217ENST00000553065 MROH7-TTC4A0A0A0MT08 1334 aa13.05□□□□□ -0.32
DDX23-217ENST00000553065 POTEFA5A3E0 1075 aa13.04□□□□□ -0.32
DDX23-217ENST00000553065 SURF6O75683 361 aaKnown RBP13.04□□□□□ -0.32
DDX23-217ENST00000553065 CYP2E1P05181 493 aaPredicted RBP13.04□□□□□ -0.32
DDX23-217ENST00000553065 TAF1CQ15572 869 aaPredicted RBP13.04□□□□□ -0.32
DDX23-217ENST00000553065 DCAF15Q66K64 600 aa13.04□□□□□ -0.32
DDX23-217ENST00000553065 OTUD7BQ6GQQ9 843 aa13.04□□□□□ -0.32
DDX23-217ENST00000553065 C17orf99Q6UX52 265 aa13.04□□□□□ -0.32
DDX23-217ENST00000553065 ERICH6Q7L0X2 663 aa13.04□□□□□ -0.32
DDX23-217ENST00000553065 ADGRA1Q86SQ6 560 aa13.04□□□□□ -0.32
DDX23-217ENST00000553065 TLR7Q9NYK1 1049 aaKnown RBP13.04□□□□□ -0.32
DDX23-217ENST00000553065 ZBED9Q6R2W3 1325 aa13.04□□□□□ -0.32
DDX23-217ENST00000553065 TLR2O60603 784 aa13.03□□□□□ -0.32
DDX23-217ENST00000553065 CETPP11597 493 aa13.03□□□□□ -0.32
DDX23-217ENST00000553065 JAG1P78504 1218 aa13.03□□□□□ -0.32
DDX23-217ENST00000553065 SNAPC2Q13487 334 aa13.03□□□□□ -0.32
DDX23-217ENST00000553065 CEP85Q6P2H3 762 aa13.03□□□□□ -0.32
DDX23-217ENST00000553065 CCDC84Q86UT8 332 aaPredicted RBP13.03□□□□□ -0.32
DDX23-217ENST00000553065 SIRT2Q8IXJ6 389 aa13.03□□□□□ -0.32
DDX23-217ENST00000553065 ZGPATQ8N5A5 531 aaKnown RBP13.03□□□□□ -0.32
DDX23-217ENST00000553065 EFCC1Q9HA90 598 aa13.03□□□□□ -0.32
DDX23-217ENST00000553065 ZFYVE28Q9HCC9 887 aa13.03□□□□□ -0.32
DDX23-217ENST00000553065 DBNLQ9UJU6 430 aaKnown RBP13.03□□□□□ -0.32
DDX23-217ENST00000553065 AFG3L2Q9Y4W6 797 aa13.03□□□□□ -0.32
DDX23-217ENST00000553065 ADGRA2Q96PE1 1338 aa13.03□□□□□ -0.32
DDX23-217ENST00000553065 FAM196BA6NMK8 535 aa13.02□□□□□ -0.33
DDX23-217ENST00000553065 NPM3O75607 178 aaKnown RBP13.02□□□□□ -0.33
DDX23-217ENST00000553065 PTPRAP18433 802 aa13.02□□□□□ -0.33
DDX23-217ENST00000553065 SPTY2D1Q68D10 685 aaPredicted RBP13.02□□□□□ -0.33
DDX23-217ENST00000553065 DZIP1Q86YF9 867 aaKnown RBP13.02□□□□□ -0.33
DDX23-217ENST00000553065 HOOK2Q96ED9 719 aa13.02□□□□□ -0.33
DDX23-217ENST00000553065 ERO1AQ96HE7 468 aa13.02□□□□□ -0.33
DDX23-217ENST00000553065 ZNF512BQ96KM6 892 aaPredicted RBP13.02□□□□□ -0.33
DDX23-217ENST00000553065 CCDC8Q9H0W5 538 aaPredicted RBP13.02□□□□□ -0.33
DDX23-217ENST00000553065 PIH1D3Q9NQM4 214 aaKnown RBP13.02□□□□□ -0.33
DDX23-217ENST00000553065 ZSWIM8A7E2V4 1837 aa13.02□□□□□ -0.33
DDX23-217ENST00000553065 ZAP70P43403 619 aa13.01□□□□□ -0.33
DDX23-217ENST00000553065 PICALMQ13492 652 aa13.01□□□□□ -0.33
DDX23-217ENST00000553065 ANKRD23Q86SG2 305 aa13.01□□□□□ -0.33
DDX23-217ENST00000553065 ITPRIPQ8IWB1 547 aa13.01□□□□□ -0.33
DDX23-217ENST00000553065 SH3RF3Q8TEJ3 882 aaPredicted RBP13.01□□□□□ -0.33
DDX23-217ENST00000553065 ARMC5Q96C12 935 aa13.01□□□□□ -0.33
DDX23-217ENST00000553065 ZCCHC17Q9NP64 241 aaKnown RBP13.01□□□□□ -0.33
DDX23-217ENST00000553065 NDUFB9Q9Y6M9 179 aa13.01□□□□□ -0.33
DDX23-217ENST00000553065 ZHX2Q9Y6X8 837 aa13.01□□□□□ -0.33
DDX23-217ENST00000553065 PDHXO00330 501 aa13□□□□□ -0.33
DDX23-217ENST00000553065 CXCL11O14625 94 aa13□□□□□ -0.33
DDX23-217ENST00000553065 TBC1D12O60347 775 aa13□□□□□ -0.33
DDX23-217ENST00000553065 UQCRFS1P1P0C7P4 283 aa13□□□□□ -0.33
DDX23-217ENST00000553065 PPP4CP60510 307 aa13□□□□□ -0.33
DDX23-217ENST00000553065 GORABQ5T7V8 394 aa13□□□□□ -0.33
DDX23-217ENST00000553065 SCYL3Q8IZE3 742 aa13□□□□□ -0.33
DDX23-217ENST00000553065 ANTXR1Q9H6X2 564 aa13□□□□□ -0.33
DDX23-217ENST00000553065 RAI14Q9P0K7 980 aa13□□□□□ -0.33
DDX23-217ENST00000553065 CPA4Q9UI42 421 aa13□□□□□ -0.33
DDX23-217ENST00000553065 PTCH2Q9Y6C5 1203 aa13□□□□□ -0.33
DDX23-217ENST00000553065 PDE4DIPQ5VU43 2346 aa13□□□□□ -0.33
DDX23-217ENST00000553065 KIAA0100Q14667 2235 aaKnown RBP13□□□□□ -0.33
DDX23-217ENST00000553065 AK9Q5TCS8 1911 aa13□□□□□ -0.33
DDX23-217ENST00000553065 MYO5AQ9Y4I1 1855 aaKnown RBP12.99□□□□□ -0.33
DDX23-217ENST00000553065 A0A0G2JLL6 359 aaPredicted RBP12.99□□□□□ -0.33
DDX23-217ENST00000553065 CYP2C8P10632 490 aa12.99□□□□□ -0.33
DDX23-217ENST00000553065 BCRP11274 1271 aa12.99□□□□□ -0.33
DDX23-217ENST00000553065 LACTBP83111 547 aaPredicted RBP12.99□□□□□ -0.33
DDX23-217ENST00000553065 SHROOM1Q2M3G4 852 aaPredicted RBP12.99□□□□□ -0.33
DDX23-217ENST00000553065 PRRT2Q7Z6L0 340 aaPredicted RBP12.99□□□□□ -0.33
DDX23-217ENST00000553065 ZBTB40Q9NUA8 1239 aa12.99□□□□□ -0.33
DDX23-217ENST00000553065 PHIPQ8WWQ0 1821 aa12.98□□□□□ -0.33
DDX23-217ENST00000553065 CTNND1O60716 968 aaKnown RBP12.98□□□□□ -0.33
DDX23-217ENST00000553065 ECM2O94769 699 aaPredicted RBP12.98□□□□□ -0.33
DDX23-217ENST00000553065 LDHCP07864 332 aa12.98□□□□□ -0.33
DDX23-217ENST00000553065 EN2P19622 333 aaPredicted RBP12.98□□□□□ -0.33
DDX23-217ENST00000553065 DYNLL1P63167 89 aaKnown RBP12.98□□□□□ -0.33
DDX23-217ENST00000553065 METTL16Q86W50 562 aaKnown RBP12.98□□□□□ -0.33
DDX23-217ENST00000553065 ZSCAN29Q8IWY8 852 aaPredicted RBP12.98□□□□□ -0.33
DDX23-217ENST00000553065 SLF2Q8IX21 1173 aa12.98□□□□□ -0.33
DDX23-217ENST00000553065 FTSJ3Q8IY81 847 aaKnown RBP12.98□□□□□ -0.33
DDX23-217ENST00000553065 ZNF333Q96JL9 665 aa12.98□□□□□ -0.33
DDX23-217ENST00000553065 TRIM47Q96LD4 638 aa12.98□□□□□ -0.33
DDX23-217ENST00000553065 OSBPL5Q9H0X9 879 aaPredicted RBP12.98□□□□□ -0.33
DDX23-217ENST00000553065 DNAJC18Q9H819 358 aa12.98□□□□□ -0.33
DDX23-217ENST00000553065 LRP2BPQ9P2M1 347 aa12.98□□□□□ -0.33
DDX23-217ENST00000553065 EXOC6BQ9Y2D4 811 aa12.98□□□□□ -0.33
DDX23-217ENST00000553065 CCDC158Q5M9N0 1113 aa12.97□□□□□ -0.33
DDX23-217ENST00000553065 TTC39AQ5SRH9 613 aa12.97□□□□□ -0.33
DDX23-217ENST00000553065 C20orf194Q5TEA3 1177 aa12.97□□□□□ -0.33
DDX23-217ENST00000553065 AATFQ9NY61 560 aaKnown RBP eCLIP12.97□□□□□ -0.33
DDX23-217ENST00000553065 MAP4K4O95819 1239 aaPredicted RBP12.96□□□□□ -0.33
DDX23-217ENST00000553065 GSTO1P78417 241 aa12.96□□□□□ -0.33
DDX23-217ENST00000553065 TREML2Q5T2D2 321 aa12.96□□□□□ -0.33
DDX23-217ENST00000553065 NAA16Q6N069 864 aaPredicted RBP12.96□□□□□ -0.33
DDX23-217ENST00000553065 TEX11Q8IYF3 940 aa12.96□□□□□ -0.33
DDX23-217ENST00000553065 TGFBRAP1Q8WUH2 860 aa12.96□□□□□ -0.33
DDX23-217ENST00000553065 COG6Q9Y2V7 657 aa12.96□□□□□ -0.33
DDX23-217ENST00000553065 SIPA1L1O43166 1804 aa12.96□□□□□ -0.33
DDX23-217ENST00000553065 OSBPP22059 807 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms