RNA–Protein interactions for RNA: ENST00000552800.2

TMEM116-216, Transcript of transmembrane protein 116, humanhuman

TSL 3

Gene TMEM116, Length 485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-216ENST00000552800 NBPF3Q9H094 633 aa11.63□□□□□ -0.55
TMEM116-216ENST00000552800 CD209Q9NNX6 404 aa11.63□□□□□ -0.55
TMEM116-216ENST00000552800 STK32BQ9NY57 414 aa11.63□□□□□ -0.55
TMEM116-216ENST00000552800 LRP2BPQ9P2M1 347 aa11.63□□□□□ -0.55
TMEM116-216ENST00000552800 MKRN1Q9UHC7 482 aaKnown RBP11.63□□□□□ -0.55
TMEM116-216ENST00000552800 SNED1Q8TER0 1413 aa11.62□□□□□ -0.55
TMEM116-216ENST00000552800 FRAT2O75474 233 aaPredicted RBP11.62□□□□□ -0.55
TMEM116-216ENST00000552800 MCM5P33992 734 aa11.62□□□□□ -0.55
TMEM116-216ENST00000552800 LIFRP42702 1097 aa11.62□□□□□ -0.55
TMEM116-216ENST00000552800 BAG6P46379 1132 aa11.62□□□□□ -0.55
TMEM116-216ENST00000552800 RCAN1P53805 252 aa11.62□□□□□ -0.55
TMEM116-216ENST00000552800 ZNF804AQ7Z570 1209 aa11.62□□□□□ -0.55
TMEM116-216ENST00000552800 SGMS1Q86VZ5 419 aa11.62□□□□□ -0.55
TMEM116-216ENST00000552800 ZNF710Q8N1W2 664 aa11.62□□□□□ -0.55
TMEM116-216ENST00000552800 TBC1D22AQ8WUA7 517 aa11.62□□□□□ -0.55
TMEM116-216ENST00000552800 STAG1Q8WVM7 1258 aa11.62□□□□□ -0.55
TMEM116-216ENST00000552800 GBP4Q96PP9 640 aa11.62□□□□□ -0.55
TMEM116-216ENST00000552800 COA1Q9GZY4 146 aa11.62□□□□□ -0.55
TMEM116-216ENST00000552800 ATP8A2Q9NTI2 1148 aa11.62□□□□□ -0.55
TMEM116-216ENST00000552800 POLLQ9UGP5 575 aa11.62□□□□□ -0.55
TMEM116-216ENST00000552800 GGA1Q9UJY5 639 aa11.62□□□□□ -0.55
TMEM116-216ENST00000552800 TIAM2Q8IVF5 1701 aa11.62□□□□□ -0.55
TMEM116-216ENST00000552800 MAST2Q6P0Q8 1798 aa11.62□□□□□ -0.55
TMEM116-216ENST00000552800 DDX11L8A8MPP1 907 aa11.61□□□□□ -0.55
TMEM116-216ENST00000552800 NPHP1O15259 732 aa11.61□□□□□ -0.55
TMEM116-216ENST00000552800 CPA1P15085 419 aa11.61□□□□□ -0.55
TMEM116-216ENST00000552800 KLRK1P26718 216 aa11.61□□□□□ -0.55
TMEM116-216ENST00000552800 EN1Q05925 392 aaPredicted RBP11.61□□□□□ -0.55
TMEM116-216ENST00000552800 TTLL5Q6EMB2 1281 aa11.61□□□□□ -0.55
TMEM116-216ENST00000552800 CCDC24Q8N4L8 307 aa11.61□□□□□ -0.55
TMEM116-216ENST00000552800 GTF3C6Q969F1 213 aa11.61□□□□□ -0.55
TMEM116-216ENST00000552800 TMEM87BQ96K49 555 aa11.61□□□□□ -0.55
TMEM116-216ENST00000552800 NACAP1Q9BZK3 213 aa11.61□□□□□ -0.55
TMEM116-216ENST00000552800 CNNM2Q9H8M5 875 aa11.61□□□□□ -0.55
TMEM116-216ENST00000552800 ANO8Q9HCE9 1232 aaPredicted RBP11.61□□□□□ -0.55
TMEM116-216ENST00000552800 EPB41L4AQ9HCS5 686 aaPredicted RBP11.61□□□□□ -0.55
TMEM116-216ENST00000552800 EMILIN3Q9NT22 766 aa11.61□□□□□ -0.55
TMEM116-216ENST00000552800 ANKIB1Q9P2G1 1089 aa11.61□□□□□ -0.55
TMEM116-216ENST00000552800 WDR33Q9C0J8 1336 aaKnown RBP11.6□□□□□ -0.55
TMEM116-216ENST00000552800 NID2Q14112 1375 aa11.6□□□□□ -0.55
TMEM116-216ENST00000552800 MAGEB6P1A0A0J9YX57 407 aa11.6□□□□□ -0.55
TMEM116-216ENST00000552800 BAG4O95429 457 aaKnown RBP11.6□□□□□ -0.55
TMEM116-216ENST00000552800 LDHCP07864 332 aa11.6□□□□□ -0.55
TMEM116-216ENST00000552800 PDCP20941 246 aa11.6□□□□□ -0.55
TMEM116-216ENST00000552800 CYP7A1P22680 504 aa11.6□□□□□ -0.55
TMEM116-216ENST00000552800 MECOMQ03112 1051 aa11.6□□□□□ -0.55
TMEM116-216ENST00000552800 SKOR2Q2VWA4 1001 aaPredicted RBP11.6□□□□□ -0.55
TMEM116-216ENST00000552800 NAA16Q6N069 864 aaPredicted RBP11.6□□□□□ -0.55
TMEM116-216ENST00000552800 Q6ZUG5 572 aa11.6□□□□□ -0.55
TMEM116-216ENST00000552800 TMTC2Q8N394 836 aa11.6□□□□□ -0.55
TMEM116-216ENST00000552800 IGDCC4Q8TDY8 1250 aa11.6□□□□□ -0.55
TMEM116-216ENST00000552800 UPF1Q92900 1129 aaKnown RBP eCLIP11.6□□□□□ -0.55
TMEM116-216ENST00000552800 CNKSR1Q969H4 720 aa11.6□□□□□ -0.55
TMEM116-216ENST00000552800 VPS33BQ9H267 617 aa11.6□□□□□ -0.55
TMEM116-216ENST00000552800 NSFL1CQ9UNZ2 370 aaKnown RBP11.6□□□□□ -0.55
TMEM116-216ENST00000552800 KIF13BQ9NQT8 1826 aa11.6□□□□□ -0.55
TMEM116-216ENST00000552800 GPR75-ASB3A0A0A6YYF3 556 aa11.59□□□□□ -0.55
TMEM116-216ENST00000552800 A0A0G2JLW4 131 aa11.59□□□□□ -0.55
TMEM116-216ENST00000552800 PPEF1O14829 653 aaPredicted RBP11.59□□□□□ -0.55
TMEM116-216ENST00000552800 MBD4O95243 580 aa11.59□□□□□ -0.55
TMEM116-216ENST00000552800 LARGE1O95461 756 aa11.59□□□□□ -0.55
TMEM116-216ENST00000552800 PDIA3P30101 505 aaKnown RBP11.59□□□□□ -0.55
TMEM116-216ENST00000552800 PTGER2P43116 358 aa11.59□□□□□ -0.55
TMEM116-216ENST00000552800 ANTXR2P58335 489 aa11.59□□□□□ -0.55
TMEM116-216ENST00000552800 GSTO1P78417 241 aa11.59□□□□□ -0.55
TMEM116-216ENST00000552800 PPP2R5BQ15173 497 aa11.59□□□□□ -0.55
TMEM116-216ENST00000552800 AKNAD1Q5T1N1 836 aa11.59□□□□□ -0.55
TMEM116-216ENST00000552800 PODNQ7Z5L7 613 aa11.59□□□□□ -0.55
TMEM116-216ENST00000552800 ADGRA1Q86SQ6 560 aa11.59□□□□□ -0.55
TMEM116-216ENST00000552800 LCORLQ8N3X6 602 aa11.59□□□□□ -0.55
TMEM116-216ENST00000552800 KRT23Q9C075 422 aa11.59□□□□□ -0.55
TMEM116-216ENST00000552800 RNF41Q9H4P4 317 aaPredicted RBP11.59□□□□□ -0.55
TMEM116-216ENST00000552800 H0YIN7 160 aa11.58□□□□□ -0.56
TMEM116-216ENST00000552800 SYT1P21579 422 aa11.58□□□□□ -0.56
TMEM116-216ENST00000552800 HMGN5P82970 282 aaKnown RBP11.58□□□□□ -0.56
TMEM116-216ENST00000552800 TRDNQ13061 729 aa11.58□□□□□ -0.56
TMEM116-216ENST00000552800 MPNDQ8N594 471 aa11.58□□□□□ -0.56
TMEM116-216ENST00000552800 TMEM87AQ8NBN3 555 aa11.58□□□□□ -0.56
TMEM116-216ENST00000552800 NAPBQ9H115 298 aa11.58□□□□□ -0.56
TMEM116-216ENST00000552800 ARMT1Q9H993 441 aa11.58□□□□□ -0.56
TMEM116-216ENST00000552800 RAI14Q9P0K7 980 aa11.58□□□□□ -0.56
TMEM116-216ENST00000552800 ABCF2Q9UG63 623 aa11.58□□□□□ -0.56
TMEM116-216ENST00000552800 SMC3Q9UQE7 1217 aa11.58□□□□□ -0.56
TMEM116-216ENST00000552800 CHD4Q14839 1912 aa11.58□□□□□ -0.56
TMEM116-216ENST00000552800 GAKO14976 1311 aa11.58□□□□□ -0.56
TMEM116-216ENST00000552800 COL11A2P13942 1736 aaPredicted RBP11.57□□□□□ -0.56
TMEM116-216ENST00000552800 DLEC1Q9Y238 1755 aa11.57□□□□□ -0.56
TMEM116-216ENST00000552800 STX6O43752 255 aa11.57□□□□□ -0.56
TMEM116-216ENST00000552800 ORC4O43929 436 aa11.57□□□□□ -0.56
TMEM116-216ENST00000552800 UFL1O94874 794 aa11.57□□□□□ -0.56
TMEM116-216ENST00000552800 LDHBP07195 334 aaKnown RBP11.57□□□□□ -0.56
TMEM116-216ENST00000552800 HDLBPQ00341 1268 aaKnown RBP11.57□□□□□ -0.56
TMEM116-216ENST00000552800 PKP1Q13835 747 aa11.57□□□□□ -0.56
TMEM116-216ENST00000552800 DOK7Q18PE1 504 aa11.57□□□□□ -0.56
TMEM116-216ENST00000552800 VARS2Q5ST30 1063 aaKnown RBP11.57□□□□□ -0.56
TMEM116-216ENST00000552800 SLF2Q8IX21 1173 aa11.57□□□□□ -0.56
TMEM116-216ENST00000552800 EYA3Q99504 573 aa11.57□□□□□ -0.56
TMEM116-216ENST00000552800 ANGEL1Q9UNK9 670 aaKnown RBP11.57□□□□□ -0.56
TMEM116-216ENST00000552800 SLC4A4Q9Y6R1 1079 aa11.57□□□□□ -0.56
TMEM116-216ENST00000552800 SH2B2O14492 632 aaPredicted RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms