RNA–Protein interactions for RNA: ENST00000552713.5

CDK4-213, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 685 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-213ENST00000552713 CDC42EP5Q6NZY7 148 aa10.71□□□□□ -0.69
CDK4-213ENST00000552713 SLC4A10Q6U841 1118 aa10.71□□□□□ -0.69
CDK4-213ENST00000552713 HHIPL2Q6UWX4 724 aa10.71□□□□□ -0.69
CDK4-213ENST00000552713 ANKRD44Q8N8A2 993 aa10.71□□□□□ -0.69
CDK4-213ENST00000552713 SLAIN1Q8ND83 568 aa10.71□□□□□ -0.69
CDK4-213ENST00000552713 DIS3LQ8TF46 1054 aaKnown RBP10.71□□□□□ -0.69
CDK4-213ENST00000552713 FAM151AQ8WW52 585 aa10.71□□□□□ -0.69
CDK4-213ENST00000552713 HOOK2Q96ED9 719 aa10.71□□□□□ -0.69
CDK4-213ENST00000552713 DEFB118Q96PH6 123 aa10.71□□□□□ -0.69
CDK4-213ENST00000552713 BICC1Q9H694 974 aaKnown RBP10.71□□□□□ -0.69
CDK4-213ENST00000552713 FAM198AQ9UFP1 575 aa10.71□□□□□ -0.69
CDK4-213ENST00000552713 SALL2Q9Y467 1007 aaPredicted RBP10.71□□□□□ -0.69
CDK4-213ENST00000552713 A0A1W2PPC1 479 aa10.7□□□□□ -0.7
CDK4-213ENST00000552713 ALDH1L1O75891 902 aa10.7□□□□□ -0.7
CDK4-213ENST00000552713 PDE8BO95263 885 aa10.7□□□□□ -0.7
CDK4-213ENST00000552713 TFRCP02786 760 aaKnown RBP10.7□□□□□ -0.7
CDK4-213ENST00000552713 METTL24Q5JXM2 366 aa10.7□□□□□ -0.7
CDK4-213ENST00000552713 Q7L0L9 218 aa10.7□□□□□ -0.7
CDK4-213ENST00000552713 PAWRQ96IZ0 340 aaKnown RBP10.7□□□□□ -0.7
CDK4-213ENST00000552713 PARK7Q99497 189 aaKnown RBP10.7□□□□□ -0.7
CDK4-213ENST00000552713 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.7□□□□□ -0.7
CDK4-213ENST00000552713 DAGLAQ9Y4D2 1042 aa10.7□□□□□ -0.7
CDK4-213ENST00000552713 ATRNL1Q5VV63 1379 aa10.69□□□□□ -0.7
CDK4-213ENST00000552713 PHF20L1A8MW92 1017 aa10.69□□□□□ -0.7
CDK4-213ENST00000552713 FGFR2P21802 821 aa10.69□□□□□ -0.7
CDK4-213ENST00000552713 RABL6Q3YEC7 729 aaPredicted RBP10.69□□□□□ -0.7
CDK4-213ENST00000552713 CAVIN4Q5BKX8 364 aa10.69□□□□□ -0.7
CDK4-213ENST00000552713 SRCIN1Q9C0H9 1055 aa10.69□□□□□ -0.7
CDK4-213ENST00000552713 PAK6Q9NQU5 681 aaPredicted RBP10.69□□□□□ -0.7
CDK4-213ENST00000552713 UTYO14607 1347 aa10.68□□□□□ -0.7
CDK4-213ENST00000552713 MAST3O60307 1309 aa10.68□□□□□ -0.7
CDK4-213ENST00000552713 A0A0G2JLL6 359 aaPredicted RBP10.68□□□□□ -0.7
CDK4-213ENST00000552713 CXCL11O14625 94 aa10.68□□□□□ -0.7
CDK4-213ENST00000552713 PTPRAP18433 802 aa10.68□□□□□ -0.7
CDK4-213ENST00000552713 PRDX5P30044 214 aa10.68□□□□□ -0.7
CDK4-213ENST00000552713 GADL1Q6ZQY3 521 aa10.68□□□□□ -0.7
CDK4-213ENST00000552713 PRRT2Q7Z6L0 340 aaPredicted RBP10.68□□□□□ -0.7
CDK4-213ENST00000552713 CCDC84Q86UT8 332 aaPredicted RBP10.68□□□□□ -0.7
CDK4-213ENST00000552713 GDF15Q99988 308 aa10.68□□□□□ -0.7
CDK4-213ENST00000552713 CRISPLD2Q9H0B8 497 aa10.68□□□□□ -0.7
CDK4-213ENST00000552713 ZMYND8Q9ULU4 1186 aaPredicted RBP10.68□□□□□ -0.7
CDK4-213ENST00000552713 SUGT1Q9Y2Z0 365 aa10.68□□□□□ -0.7
CDK4-213ENST00000552713 ZHX2Q9Y6X8 837 aa10.68□□□□□ -0.7
CDK4-213ENST00000552713 LOC285556D6RIA3 1793 aa10.67□□□□□ -0.7
CDK4-213ENST00000552713 TNPO2O14787 897 aaKnown RBP10.67□□□□□ -0.7
CDK4-213ENST00000552713 MNX1P50219 401 aaPredicted RBP10.67□□□□□ -0.7
CDK4-213ENST00000552713 MKRN4PQ13434 485 aaPredicted RBP10.67□□□□□ -0.7
CDK4-213ENST00000552713 SH3BP5LQ7L8J4 393 aa10.67□□□□□ -0.7
CDK4-213ENST00000552713 C7orf61Q8IZ16 206 aa10.67□□□□□ -0.7
CDK4-213ENST00000552713 PXYLP1Q8TE99 480 aa10.67□□□□□ -0.7
CDK4-213ENST00000552713 PLSCR2Q9NRY7 297 aa10.67□□□□□ -0.7
CDK4-213ENST00000552713 USP40Q9NVE5 1235 aa10.67□□□□□ -0.7
CDK4-213ENST00000552713 TAOK2Q9UL54 1235 aa10.67□□□□□ -0.7
CDK4-213ENST00000552713 AFG3L2Q9Y4W6 797 aa10.67□□□□□ -0.7
CDK4-213ENST00000552713 FRMPD3Q5JV73 1810 aa10.66□□□□□ -0.7
CDK4-213ENST00000552713 SYN1P17600 705 aa10.66□□□□□ -0.7
CDK4-213ENST00000552713 TRIM32Q13049 653 aa10.66□□□□□ -0.7
CDK4-213ENST00000552713 IRF5Q13568 498 aa10.66□□□□□ -0.7
CDK4-213ENST00000552713 PUM3Q15397 648 aaKnown RBP10.66□□□□□ -0.7
CDK4-213ENST00000552713 WDR63Q8IWG1 891 aa10.66□□□□□ -0.7
CDK4-213ENST00000552713 SCYL3Q8IZE3 742 aa10.66□□□□□ -0.7
CDK4-213ENST00000552713 DEFB123Q8N688 67 aa10.66□□□□□ -0.7
CDK4-213ENST00000552713 ANKRD13CQ8N6S4 541 aa10.66□□□□□ -0.7
CDK4-213ENST00000552713 KIF16BQ96L93 1317 aa10.65□□□□□ -0.7
CDK4-213ENST00000552713 DDTLA6NHG4 134 aaPredicted RBP10.65□□□□□ -0.7
CDK4-213ENST00000552713 IFIT1P09914 478 aaKnown RBP10.65□□□□□ -0.7
CDK4-213ENST00000552713 BMP8BP34820 402 aa10.65□□□□□ -0.7
CDK4-213ENST00000552713 RFX5P48382 616 aaPredicted RBP10.65□□□□□ -0.7
CDK4-213ENST00000552713 RGS3P49796 1198 aa10.65□□□□□ -0.7
CDK4-213ENST00000552713 TREML2Q5T2D2 321 aa10.65□□□□□ -0.7
CDK4-213ENST00000552713 FASTKD5Q7L8L6 764 aaKnown RBP10.65□□□□□ -0.7
CDK4-213ENST00000552713 NECAB2Q7Z6G3 386 aa10.65□□□□□ -0.7
CDK4-213ENST00000552713 WDR66Q8TBY9 1149 aa10.65□□□□□ -0.7
CDK4-213ENST00000552713 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.65□□□□□ -0.7
CDK4-213ENST00000552713 MTMR10Q9NXD2 777 aa10.65□□□□□ -0.7
CDK4-213ENST00000552713 SSUH2Q9Y2M2 353 aa10.65□□□□□ -0.7
CDK4-213ENST00000552713 RFX7Q2KHR2 1363 aa10.65□□□□□ -0.71
CDK4-213ENST00000552713 CDK5RAP2Q96SN8 1893 aa10.64□□□□□ -0.71
CDK4-213ENST00000552713 SIPA1L1O43166 1804 aa10.64□□□□□ -0.71
CDK4-213ENST00000552713 TRIM75PA6NK02 468 aa10.64□□□□□ -0.71
CDK4-213ENST00000552713 MAGEA10P43363 369 aaPredicted RBP10.64□□□□□ -0.71
CDK4-213ENST00000552713 ATG9AQ7Z3C6 839 aa10.64□□□□□ -0.71
CDK4-213ENST00000552713 SMCR8Q8TEV9 937 aaPredicted RBP10.64□□□□□ -0.71
CDK4-213ENST00000552713 DDX4Q9NQI0 724 aaKnown RBP10.64□□□□□ -0.71
CDK4-213ENST00000552713 PICK1Q9NRD5 415 aa10.64□□□□□ -0.71
CDK4-213ENST00000552713 SLC45A1Q9Y2W3 748 aa10.64□□□□□ -0.71
CDK4-213ENST00000552713 A0A0C4DFX4 3053 aa10.64□□□□□ -0.71
CDK4-213ENST00000552713 FAM196BA6NMK8 535 aa10.63□□□□□ -0.71
CDK4-213ENST00000552713 LDHBP07195 334 aaKnown RBP10.63□□□□□ -0.71
CDK4-213ENST00000552713 SLC5A1P13866 664 aa10.63□□□□□ -0.71
CDK4-213ENST00000552713 ZEB1P37275 1124 aaPredicted RBP10.63□□□□□ -0.71
CDK4-213ENST00000552713 MAP3K10Q02779 954 aa10.63□□□□□ -0.71
CDK4-213ENST00000552713 GPR153Q6NV75 609 aa10.63□□□□□ -0.71
CDK4-213ENST00000552713 COL25A1Q9BXS0 654 aaPredicted RBP10.63□□□□□ -0.71
CDK4-213ENST00000552713 USP44Q9H0E7 712 aa10.63□□□□□ -0.71
CDK4-213ENST00000552713 GJD2Q9UKL4 321 aa10.63□□□□□ -0.71
CDK4-213ENST00000552713 STXBP5LQ9Y2K9 1186 aa10.63□□□□□ -0.71
CDK4-213ENST00000552713 MYO5AQ9Y4I1 1855 aaKnown RBP10.62□□□□□ -0.71
CDK4-213ENST00000552713 EYA2O00167 538 aa10.62□□□□□ -0.71
CDK4-213ENST00000552713 PEX10O60683 326 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms