RNA–Protein interactions for RNA: ENST00000552610.1

RAB3IP-217, Transcript of RAB3A interacting protein, humanhuman

TSL 2

Gene RAB3IP, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-217ENST00000552610 NEFMP07197 916 aa8.36□□□□□ -1.07
RAB3IP-217ENST00000552610 ADMP35318 185 aa8.36□□□□□ -1.07
RAB3IP-217ENST00000552610 HNRNPUQ00839 825 aaKnown RBP eCLIP8.36□□□□□ -1.07
RAB3IP-217ENST00000552610 TTLL4Q14679 1199 aa8.36□□□□□ -1.07
RAB3IP-217ENST00000552610 LRRC14Q15048 493 aa8.36□□□□□ -1.07
RAB3IP-217ENST00000552610 MAP3K11Q16584 847 aa8.36□□□□□ -1.07
RAB3IP-217ENST00000552610 SEZ6L2Q6UXD5 910 aa8.36□□□□□ -1.07
RAB3IP-217ENST00000552610 DAGLAQ9Y4D2 1042 aa8.36□□□□□ -1.07
RAB3IP-217ENST00000552610 F13BP05160 661 aa8.35□□□□□ -1.07
RAB3IP-217ENST00000552610 HCLS1P14317 486 aaPredicted RBP8.35□□□□□ -1.07
RAB3IP-217ENST00000552610 LIG3P49916 1009 aa8.35□□□□□ -1.07
RAB3IP-217ENST00000552610 ST13P50502 369 aaKnown RBP8.35□□□□□ -1.07
RAB3IP-217ENST00000552610 TAF1CQ15572 869 aaPredicted RBP8.35□□□□□ -1.07
RAB3IP-217ENST00000552610 Q8N3U1 123 aa8.35□□□□□ -1.07
RAB3IP-217ENST00000552610 FBXL6Q8N531 539 aa8.35□□□□□ -1.07
RAB3IP-217ENST00000552610 LGR6Q9HBX8 967 aa8.35□□□□□ -1.07
RAB3IP-217ENST00000552610 MRS2Q9HD23 443 aa8.35□□□□□ -1.07
RAB3IP-217ENST00000552610 DCDC2CA8MYV0 355 aa8.34□□□□□ -1.07
RAB3IP-217ENST00000552610 WDR64B1ANS9 1081 aa8.34□□□□□ -1.07
RAB3IP-217ENST00000552610 ERVK-24P63145 666 aa8.34□□□□□ -1.07
RAB3IP-217ENST00000552610 MAP7Q14244 749 aa8.34□□□□□ -1.07
RAB3IP-217ENST00000552610 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.34□□□□□ -1.07
RAB3IP-217ENST00000552610 TBC1D32Q96NH3 1257 aa8.34□□□□□ -1.07
RAB3IP-217ENST00000552610 PIDD1Q9HB75 910 aa8.34□□□□□ -1.07
RAB3IP-217ENST00000552610 C1GALT1Q9NS00 363 aa8.34□□□□□ -1.07
RAB3IP-217ENST00000552610 PCDHA4Q9UN74 947 aa8.34□□□□□ -1.07
RAB3IP-217ENST00000552610 PCDHB5Q9Y5E4 795 aa8.34□□□□□ -1.07
RAB3IP-217ENST00000552610 CSADQ9Y600 493 aa8.34□□□□□ -1.07
RAB3IP-217ENST00000552610 SCO2A0A1W2PP80 73 aa8.33□□□□□ -1.08
RAB3IP-217ENST00000552610 NTF4P34130 210 aa8.33□□□□□ -1.08
RAB3IP-217ENST00000552610 PPM1JQ5JR12 505 aa8.33□□□□□ -1.08
RAB3IP-217ENST00000552610 SCARA3Q6AZY7 606 aa8.33□□□□□ -1.08
RAB3IP-217ENST00000552610 ZAR1Q86SH2 424 aa8.33□□□□□ -1.08
RAB3IP-217ENST00000552610 ZNF16P17020 682 aaPredicted RBP8.32□□□□□ -1.08
RAB3IP-217ENST00000552610 TFE3P19532 575 aaPredicted RBP8.32□□□□□ -1.08
RAB3IP-217ENST00000552610 CDK8P49336 464 aa8.32□□□□□ -1.08
RAB3IP-217ENST00000552610 RPS26P62854 115 aaKnown RBP8.32□□□□□ -1.08
RAB3IP-217ENST00000552610 RING1Q06587 406 aa8.32□□□□□ -1.08
RAB3IP-217ENST00000552610 LRP8Q14114 963 aa8.32□□□□□ -1.08
RAB3IP-217ENST00000552610 SEPT6Q14141 434 aa8.32□□□□□ -1.08
RAB3IP-217ENST00000552610 MRPL58Q14197 206 aaKnown RBP8.32□□□□□ -1.08
RAB3IP-217ENST00000552610 INPP5AQ14642 412 aa8.32□□□□□ -1.08
RAB3IP-217ENST00000552610 ZNF326Q5BKZ1 582 aaKnown RBP8.32□□□□□ -1.08
RAB3IP-217ENST00000552610 LRFN4Q6PJG9 635 aa8.32□□□□□ -1.08
RAB3IP-217ENST00000552610 AGMOQ6ZNB7 445 aa8.32□□□□□ -1.08
RAB3IP-217ENST00000552610 C12orf40Q86WS4 652 aa8.32□□□□□ -1.08
RAB3IP-217ENST00000552610 SMYD4Q8IYR2 804 aaPredicted RBP8.32□□□□□ -1.08
RAB3IP-217ENST00000552610 RNF214Q8ND24 703 aa8.32□□□□□ -1.08
RAB3IP-217ENST00000552610 ISL2Q96A47 359 aa8.32□□□□□ -1.08
RAB3IP-217ENST00000552610 NOC4LQ9BVI4 516 aaKnown RBP8.32□□□□□ -1.08
RAB3IP-217ENST00000552610 FAM170BA6NMN3 283 aa8.31□□□□□ -1.08
RAB3IP-217ENST00000552610 F6X3S4 739 aa8.31□□□□□ -1.08
RAB3IP-217ENST00000552610 RNGTTO60942 597 aaKnown RBP8.31□□□□□ -1.08
RAB3IP-217ENST00000552610 MED26O95402 600 aa8.31□□□□□ -1.08
RAB3IP-217ENST00000552610 ARTNQ5T4W7 220 aa8.31□□□□□ -1.08
RAB3IP-217ENST00000552610 UBE3DQ7Z6J8 389 aa8.31□□□□□ -1.08
RAB3IP-217ENST00000552610 TLR6Q9Y2C9 796 aa8.31□□□□□ -1.08
RAB3IP-217ENST00000552610 SSTR4P31391 388 aa8.3□□□□□ -1.08
RAB3IP-217ENST00000552610 CD97P48960 835 aa8.3□□□□□ -1.08
RAB3IP-217ENST00000552610 CDK5R2Q13319 367 aa8.3□□□□□ -1.08
RAB3IP-217ENST00000552610 HYAL3O43820 417 aaPredicted RBP8.29□□□□□ -1.08
RAB3IP-217ENST00000552610 HOXA10P31260 410 aaPredicted RBP8.29□□□□□ -1.08
RAB3IP-217ENST00000552610 ZBTB37Q5TC79 503 aa8.29□□□□□ -1.08
RAB3IP-217ENST00000552610 PHC3Q8NDX5 983 aa8.29□□□□□ -1.08
RAB3IP-217ENST00000552610 ELMO3Q96BJ8 720 aa8.29□□□□□ -1.08
RAB3IP-217ENST00000552610 PLPPR2Q96GM1 343 aa8.29□□□□□ -1.08
RAB3IP-217ENST00000552610 OSBPL1AQ9BXW6 950 aa8.29□□□□□ -1.08
RAB3IP-217ENST00000552610 ATG3Q9NT62 314 aa8.29□□□□□ -1.08
RAB3IP-217ENST00000552610 WIPI1Q5MNZ9 446 aaPredicted RBP8.28□□□□□ -1.08
RAB3IP-217ENST00000552610 ZNF765Q7L2R6 523 aa8.28□□□□□ -1.08
RAB3IP-217ENST00000552610 CYFIP1Q7L576 1253 aa8.28□□□□□ -1.08
RAB3IP-217ENST00000552610 ZFP64Q9NPA5 681 aa8.28□□□□□ -1.08
RAB3IP-217ENST00000552610 PIM2Q9P1W9 311 aa8.28□□□□□ -1.08
RAB3IP-217ENST00000552610 PCOLCE2Q9UKZ9 415 aa8.28□□□□□ -1.08
RAB3IP-217ENST00000552610 PRAMEF27A3QJZ7 478 aa8.27□□□□□ -1.09
RAB3IP-217ENST00000552610 COBLO75128 1261 aa8.27□□□□□ -1.09
RAB3IP-217ENST00000552610 GIMAP7Q8NHV1 300 aa8.27□□□□□ -1.09
RAB3IP-217ENST00000552610 KIAA1324LA8MWY0 1029 aaPredicted RBP8.26□□□□□ -1.09
RAB3IP-217ENST00000552610 RLBP1P12271 317 aa8.26□□□□□ -1.09
RAB3IP-217ENST00000552610 LDLRAD1Q5T700 205 aa8.26□□□□□ -1.09
RAB3IP-217ENST00000552610 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.26□□□□□ -1.09
RAB3IP-217ENST00000552610 RHOVQ96L33 236 aa8.26□□□□□ -1.09
RAB3IP-217ENST00000552610 PSMG3-AS1Q96PY0 264 aa8.26□□□□□ -1.09
RAB3IP-217ENST00000552610 METTL22Q9BUU2 404 aaPredicted RBP8.26□□□□□ -1.09
RAB3IP-217ENST00000552610 MIR1-1HGQ9H1L0 117 aa8.26□□□□□ -1.09
RAB3IP-217ENST00000552610 SSU72Q9NP77 194 aaKnown RBP8.26□□□□□ -1.09
RAB3IP-217ENST00000552610 PICK1Q9NRD5 415 aa8.26□□□□□ -1.09
RAB3IP-217ENST00000552610 FANCGO15287 622 aa8.25□□□□□ -1.09
RAB3IP-217ENST00000552610 LEFTY1O75610 366 aa8.25□□□□□ -1.09
RAB3IP-217ENST00000552610 FAM87AP0C7U9 286 aa8.25□□□□□ -1.09
RAB3IP-217ENST00000552610 LMNB1P20700 586 aa8.25□□□□□ -1.09
RAB3IP-217ENST00000552610 ITGAEP38570 1179 aa8.25□□□□□ -1.09
RAB3IP-217ENST00000552610 CPSF6Q16630 551 aaKnown RBP eCLIP8.25□□□□□ -1.09
RAB3IP-217ENST00000552610 XP32Q5T750 250 aa8.25□□□□□ -1.09
RAB3IP-217ENST00000552610 OGFOD3Q6PK18 319 aa8.25□□□□□ -1.09
RAB3IP-217ENST00000552610 HDXQ7Z353 690 aa8.25□□□□□ -1.09
RAB3IP-217ENST00000552610 LEMD3Q9Y2U8 911 aa8.25□□□□□ -1.09
RAB3IP-217ENST00000552610 RBM47A0AV96 593 aaKnown RBP8.24□□□□□ -1.09
RAB3IP-217ENST00000552610 GFRA2O00451 464 aa8.24□□□□□ -1.09
RAB3IP-217ENST00000552610 PF4P02776 101 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms