RNA–Protein interactions for RNA: ENST00000552448.1

TUBA1C-209, Transcript of tubulin alpha 1c, humanhuman

TSL 3

Gene TUBA1C, Length 1,800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1C-209ENST00000552448 ZPR1O75312 459 aa12.72□□□□□ -0.37
TUBA1C-209ENST00000552448 ARID4AP29374 1257 aaPredicted RBP12.72□□□□□ -0.37
TUBA1C-209ENST00000552448 PUM3Q15397 648 aaKnown RBP12.72□□□□□ -0.37
TUBA1C-209ENST00000552448 ERCC6LQ2NKX8 1250 aa12.72□□□□□ -0.37
TUBA1C-209ENST00000552448 CCDC152Q4G0S7 254 aa12.72□□□□□ -0.37
TUBA1C-209ENST00000552448 TPRNQ4KMQ1 711 aa12.72□□□□□ -0.37
TUBA1C-209ENST00000552448 CCDC102BQ68D86 513 aa12.72□□□□□ -0.37
TUBA1C-209ENST00000552448 LPIN2Q92539 896 aa12.72□□□□□ -0.37
TUBA1C-209ENST00000552448 ORC3Q9UBD5 711 aaPredicted RBP12.72□□□□□ -0.37
TUBA1C-209ENST00000552448 ARAP2Q8WZ64 1704 aa12.71□□□□□ -0.37
TUBA1C-209ENST00000552448 CHRM1P11229 460 aaPredicted RBP12.71□□□□□ -0.38
TUBA1C-209ENST00000552448 ADD2P35612 726 aa12.71□□□□□ -0.38
TUBA1C-209ENST00000552448 PHKA1P46020 1223 aa12.71□□□□□ -0.38
TUBA1C-209ENST00000552448 SCRN1Q12765 414 aa12.71□□□□□ -0.38
TUBA1C-209ENST00000552448 TTF1Q15361 905 aaPredicted RBP12.71□□□□□ -0.38
TUBA1C-209ENST00000552448 ZSCAN26Q16670 478 aa12.71□□□□□ -0.38
TUBA1C-209ENST00000552448 KRBA2Q6ZNG9 492 aa12.71□□□□□ -0.38
TUBA1C-209ENST00000552448 UBR3Q6ZT12 1888 aa12.71□□□□□ -0.38
TUBA1C-209ENST00000552448 CEP57L1Q8IYX8 460 aa12.71□□□□□ -0.38
TUBA1C-209ENST00000552448 FBXO18Q8NFZ0 1043 aa12.71□□□□□ -0.38
TUBA1C-209ENST00000552448 HELBQ8NG08 1087 aaPredicted RBP12.71□□□□□ -0.38
TUBA1C-209ENST00000552448 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.71□□□□□ -0.38
TUBA1C-209ENST00000552448 PIH1D3Q9NQM4 214 aaKnown RBP12.71□□□□□ -0.38
TUBA1C-209ENST00000552448 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.71□□□□□ -0.382e-6■■□□□ 12.2
TUBA1C-209ENST00000552448 RSPH14Q9UHP6 348 aa12.71□□□□□ -0.38
TUBA1C-209ENST00000552448 GPAA1O43292 621 aa12.7□□□□□ -0.38
TUBA1C-209ENST00000552448 FGAP02671 866 aa12.7□□□□□ -0.38
TUBA1C-209ENST00000552448 UQCRFS1P1P0C7P4 283 aa12.7□□□□□ -0.38
TUBA1C-209ENST00000552448 NOP2P46087 812 aaKnown RBP12.7□□□□□ -0.38
TUBA1C-209ENST00000552448 FBXL16Q8N461 479 aa12.7□□□□□ -0.38
TUBA1C-209ENST00000552448 MNS1Q8NEH6 495 aa12.7□□□□□ -0.38
TUBA1C-209ENST00000552448 SMARCC2Q8TAQ2 1214 aa12.7□□□□□ -0.38
TUBA1C-209ENST00000552448 LLPHQ9BRT6 129 aaKnown RBP12.7□□□□□ -0.38
TUBA1C-209ENST00000552448 SEC31BQ9NQW1 1179 aa12.7□□□□□ -0.38
TUBA1C-209ENST00000552448 MYO1CO00159 1063 aa12.69□□□□□ -0.38
TUBA1C-209ENST00000552448 ETF1P62495 437 aaKnown RBP12.69□□□□□ -0.38
TUBA1C-209ENST00000552448 TUBB4BP68371 445 aa12.69□□□□□ -0.38
TUBA1C-209ENST00000552448 APOBRQ0VD83 1088 aa12.69□□□□□ -0.38
TUBA1C-209ENST00000552448 IMMTQ16891 758 aaKnown RBP12.69□□□□□ -0.38
TUBA1C-209ENST00000552448 SLC9C2Q5TAH2 1124 aa12.69□□□□□ -0.38
TUBA1C-209ENST00000552448 FERMT3Q86UX7 667 aa12.69□□□□□ -0.38
TUBA1C-209ENST00000552448 FCHSD1Q86WN1 690 aa12.69□□□□□ -0.38
TUBA1C-209ENST00000552448 MSL3Q8N5Y2 521 aaKnown RBP12.69□□□□□ -0.38
TUBA1C-209ENST00000552448 RGS22Q8NE09 1264 aa12.69□□□□□ -0.38
TUBA1C-209ENST00000552448 PPP1R13BQ96KQ4 1090 aa12.69□□□□□ -0.38
TUBA1C-209ENST00000552448 BPIFA3Q9BQP9 254 aa12.69□□□□□ -0.38
TUBA1C-209ENST00000552448 ST7Q9NRC1 585 aa12.69□□□□□ -0.38
TUBA1C-209ENST00000552448 DNAI1Q9UI46 699 aa12.69□□□□□ -0.38
TUBA1C-209ENST00000552448 CASZ1Q86V15 1759 aa12.69□□□□□ -0.38
TUBA1C-209ENST00000552448 NR1I2O75469 434 aa12.69□□□□□ -0.38
TUBA1C-209ENST00000552448 KCNQ4P56696 695 aa12.69□□□□□ -0.38
TUBA1C-209ENST00000552448 UBE3CQ15386 1083 aa12.69□□□□□ -0.38
TUBA1C-209ENST00000552448 TRAPPC3LQ5T215 181 aa12.69□□□□□ -0.38
TUBA1C-209ENST00000552448 ICE2Q659A1 982 aa12.69□□□□□ -0.38
TUBA1C-209ENST00000552448 SYT10Q6XYQ8 523 aa12.69□□□□□ -0.38
TUBA1C-209ENST00000552448 GPR161Q8N6U8 529 aaKnown RBP12.69□□□□□ -0.38
TUBA1C-209ENST00000552448 SETDB2Q96T68 719 aa12.69□□□□□ -0.38
TUBA1C-209ENST00000552448 TRMT1Q9NXH9 659 aaKnown RBP12.69□□□□□ -0.38
TUBA1C-209ENST00000552448 RGPD3A6NKT7 1758 aaPredicted RBP12.68□□□□□ -0.38
TUBA1C-209ENST00000552448 RGPD4Q7Z3J3 1758 aa12.68□□□□□ -0.38
TUBA1C-209ENST00000552448 TCRBV5S4A2TA0A5A2 114 aa12.68□□□□□ -0.38
TUBA1C-209ENST00000552448 CTDNEP1O95476 244 aa12.68□□□□□ -0.38
TUBA1C-209ENST00000552448 SLC5A1P13866 664 aa12.68□□□□□ -0.38
TUBA1C-209ENST00000552448 SFPQP23246 707 aaKnown RBP eCLIP12.68□□□□□ -0.38
TUBA1C-209ENST00000552448 RFC4P35249 363 aa12.68□□□□□ -0.38
TUBA1C-209ENST00000552448 GTF2A1P52655 376 aaPredicted RBP12.68□□□□□ -0.38
TUBA1C-209ENST00000552448 EVCP57679 992 aa12.68□□□□□ -0.38
TUBA1C-209ENST00000552448 HAND2P61296 217 aa12.68□□□□□ -0.38
TUBA1C-209ENST00000552448 SLC10A5Q5PT55 438 aa12.68□□□□□ -0.38
TUBA1C-209ENST00000552448 FAM173BQ6P4H8 233 aa12.68□□□□□ -0.38
TUBA1C-209ENST00000552448 CHST3Q7LGC8 479 aa12.68□□□□□ -0.38
TUBA1C-209ENST00000552448 NSUN7Q8NE18 718 aaKnown RBP12.68□□□□□ -0.38
TUBA1C-209ENST00000552448 ZNF274Q96GC6 653 aaPredicted RBP12.68□□□□□ -0.38
TUBA1C-209ENST00000552448 MPHOSPH8Q99549 860 aa12.68□□□□□ -0.38
TUBA1C-209ENST00000552448 MYO5AQ9Y4I1 1855 aaKnown RBP12.68□□□□□ -0.38
TUBA1C-209ENST00000552448 GOLGA6L9A6NEM1 432 aa12.67□□□□□ -0.38
TUBA1C-209ENST00000552448 SNAP23O00161 211 aa12.67□□□□□ -0.38
TUBA1C-209ENST00000552448 DHX16O60231 1041 aaKnown RBP12.67□□□□□ -0.38
TUBA1C-209ENST00000552448 RPS6KA5O75582 802 aa12.67□□□□□ -0.38
TUBA1C-209ENST00000552448 PDE6AP16499 860 aa12.67□□□□□ -0.38
TUBA1C-209ENST00000552448 RXRBP28702 533 aa12.67□□□□□ -0.38
TUBA1C-209ENST00000552448 PDIA3P30101 505 aaKnown RBP12.67□□□□□ -0.38
TUBA1C-209ENST00000552448 SMC1AQ14683 1233 aaKnown RBP12.67□□□□□ -0.38
TUBA1C-209ENST00000552448 E4F1Q66K89 784 aaPredicted RBP12.67□□□□□ -0.38
TUBA1C-209ENST00000552448 SRLQ86TD4 932 aa12.67□□□□□ -0.38
TUBA1C-209ENST00000552448 ARHGEF1Q92888 912 aaKnown RBP12.67□□□□□ -0.38
TUBA1C-209ENST00000552448 CDC5LQ99459 802 aaKnown RBP12.67□□□□□ -0.38
TUBA1C-209ENST00000552448 IDH1O75874 414 aaKnown RBP12.67□□□□□ -0.38
TUBA1C-209ENST00000552448 TRIM37O94972 964 aa12.67□□□□□ -0.38
TUBA1C-209ENST00000552448 SF3B3Q15393 1217 aaKnown RBP12.67□□□□□ -0.38
TUBA1C-209ENST00000552448 LEKR1Q6ZMV7 388 aa12.67□□□□□ -0.38
TUBA1C-209ENST00000552448 CCDC73Q6ZRK6 1079 aa12.67□□□□□ -0.38
TUBA1C-209ENST00000552448 MB21D2Q8IYB1 491 aaPredicted RBP12.67□□□□□ -0.38
TUBA1C-209ENST00000552448 SPATA5Q8NB90 893 aa12.67□□□□□ -0.38
TUBA1C-209ENST00000552448 DDX11Q96FC9 970 aa12.67□□□□□ -0.38
TUBA1C-209ENST00000552448 ARFGAP3Q9NP61 516 aa12.67□□□□□ -0.38
TUBA1C-209ENST00000552448 WWC3Q9ULE0 1092 aa12.67□□□□□ -0.38
TUBA1C-209ENST00000552448 ZNF532Q9HCE3 1301 aa12.67□□□□□ -0.38
TUBA1C-209ENST00000552448 ZNF213O14771 459 aa12.66□□□□□ -0.38
TUBA1C-209ENST00000552448 PLSCR1O15162 318 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms