RNA–Protein interactions for RNA: ENST00000552374.6

TMEM116-215, Transcript of transmembrane protein 116, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TMEM116, Length 1,408 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-215ENST00000552374 GTF2A2P52657 109 aa13.34□□□□□ -0.27
TMEM116-215ENST00000552374 ERO1BQ86YB8 467 aa13.34□□□□□ -0.27
TMEM116-215ENST00000552374 MS4A4AQ96JQ5 239 aa13.34□□□□□ -0.27
TMEM116-215ENST00000552374 PIH1D3Q9NQM4 214 aaKnown RBP13.34□□□□□ -0.27
TMEM116-215ENST00000552374 AATFQ9NY61 560 aaKnown RBP eCLIP13.34□□□□□ -0.27
TMEM116-215ENST00000552374 SNCAIPQ9Y6H5 919 aa13.34□□□□□ -0.27
TMEM116-215ENST00000552374 CCL15-CCL14A0A0B4J2E2 113 aa13.33□□□□□ -0.28
TMEM116-215ENST00000552374 SPDYE5A6NIY4 337 aa13.33□□□□□ -0.28
TMEM116-215ENST00000552374 RAB11FIP3O75154 756 aa13.33□□□□□ -0.28
TMEM116-215ENST00000552374 IDH1O75874 414 aaKnown RBP13.33□□□□□ -0.28
TMEM116-215ENST00000552374 BAG3O95817 575 aa13.33□□□□□ -0.28
TMEM116-215ENST00000552374 IFIT2P09913 472 aaKnown RBP13.33□□□□□ -0.28
TMEM116-215ENST00000552374 CCL15Q16663 113 aa13.33□□□□□ -0.28
TMEM116-215ENST00000552374 SH3BP5LQ7L8J4 393 aa13.33□□□□□ -0.28
TMEM116-215ENST00000552374 TEX11Q8IYF3 940 aa13.33□□□□□ -0.28
TMEM116-215ENST00000552374 ZNF112Q9UJU3 913 aa13.33□□□□□ -0.28
TMEM116-215ENST00000552374 RPAP1Q9BWH6 1393 aaPredicted RBP13.32□□□□□ -0.28
TMEM116-215ENST00000552374 TESPA1A2RU30 521 aaPredicted RBP13.32□□□□□ -0.28
TMEM116-215ENST00000552374 IRF6O14896 467 aa13.32□□□□□ -0.28
TMEM116-215ENST00000552374 SLURP2P0DP57 97 aa13.32□□□□□ -0.28
TMEM116-215ENST00000552374 CYP7A1P22680 504 aa13.32□□□□□ -0.28
TMEM116-215ENST00000552374 SH3RF3Q8TEJ3 882 aaPredicted RBP13.32□□□□□ -0.28
TMEM116-215ENST00000552374 BRI3BPQ8WY22 251 aa13.32□□□□□ -0.28
TMEM116-215ENST00000552374 CASP8AP2Q9UKL3 1982 aa13.31□□□□□ -0.28
TMEM116-215ENST00000552374 FKTNO75072 461 aa13.31□□□□□ -0.28
TMEM116-215ENST00000552374 MAP4K4O95819 1239 aaPredicted RBP13.31□□□□□ -0.28
TMEM116-215ENST00000552374 CETPP11597 493 aa13.31□□□□□ -0.28
TMEM116-215ENST00000552374 SNAPC2Q13487 334 aa13.31□□□□□ -0.28
TMEM116-215ENST00000552374 CTU1Q7Z7A3 348 aaKnown RBP13.31□□□□□ -0.28
TMEM116-215ENST00000552374 ANTXR1Q9H6X2 564 aa13.31□□□□□ -0.28
TMEM116-215ENST00000552374 ARAP2Q8WZ64 1704 aa13.31□□□□□ -0.28
TMEM116-215ENST00000552374 PHF20L1A8MW92 1017 aa13.3□□□□□ -0.28
TMEM116-215ENST00000552374 PPATQ06203 517 aa13.3□□□□□ -0.28
TMEM116-215ENST00000552374 MAP3K12Q12852 859 aa13.3□□□□□ -0.28
TMEM116-215ENST00000552374 CRHR2Q13324 411 aa13.3□□□□□ -0.28
TMEM116-215ENST00000552374 PPIL2Q13356 520 aa13.3□□□□□ -0.28
TMEM116-215ENST00000552374 ADGRA1Q86SQ6 560 aa13.3□□□□□ -0.28
TMEM116-215ENST00000552374 FAM43AQ8N2R8 423 aa13.3□□□□□ -0.28
TMEM116-215ENST00000552374 MAGEB6Q8N7X4 407 aa13.3□□□□□ -0.28
TMEM116-215ENST00000552374 TGFBRAP1Q8WUH2 860 aa13.3□□□□□ -0.28
TMEM116-215ENST00000552374 CFHR5Q9BXR6 569 aa13.3□□□□□ -0.28
TMEM116-215ENST00000552374 PICK1Q9NRD5 415 aa13.3□□□□□ -0.28
TMEM116-215ENST00000552374 ECM29Q5VYK3 1845 aa13.3□□□□□ -0.28
TMEM116-215ENST00000552374 NPM3O75607 178 aaKnown RBP13.3□□□□□ -0.28
TMEM116-215ENST00000552374 PLCG2P16885 1265 aa13.3□□□□□ -0.28
TMEM116-215ENST00000552374 PPP4CP60510 307 aa13.3□□□□□ -0.28
TMEM116-215ENST00000552374 DYNLL1P63167 89 aaKnown RBP13.3□□□□□ -0.28
TMEM116-215ENST00000552374 MAPKAPK5Q8IW41 473 aa13.3□□□□□ -0.28
TMEM116-215ENST00000552374 MIGA1Q8NAN2 632 aa13.3□□□□□ -0.28
TMEM116-215ENST00000552374 DNAJC2Q99543 621 aaKnown RBP13.3□□□□□ -0.28
TMEM116-215ENST00000552374 OSBPL5Q9H0X9 879 aaPredicted RBP13.3□□□□□ -0.28
TMEM116-215ENST00000552374 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.3□□□□□ -0.28
TMEM116-215ENST00000552374 ZHX2Q9Y6X8 837 aa13.3□□□□□ -0.28
TMEM116-215ENST00000552374 FAM196BA6NMK8 535 aa13.29□□□□□ -0.28
TMEM116-215ENST00000552374 BTBD19C9JJ37 291 aa13.29□□□□□ -0.28
TMEM116-215ENST00000552374 SMARCA5O60264 1052 aaPredicted RBP13.29□□□□□ -0.28
TMEM116-215ENST00000552374 MAP3K10Q02779 954 aa13.29□□□□□ -0.28
TMEM116-215ENST00000552374 TAF1CQ15572 869 aaPredicted RBP13.29□□□□□ -0.28
TMEM116-215ENST00000552374 NOM1Q5C9Z4 860 aaKnown RBP13.29□□□□□ -0.28
TMEM116-215ENST00000552374 NOL9Q5SY16 702 aaKnown RBP13.29□□□□□ -0.28
TMEM116-215ENST00000552374 LRRCC1Q9C099 1032 aa13.29□□□□□ -0.28
TMEM116-215ENST00000552374 ZFYVE28Q9HCC9 887 aa13.29□□□□□ -0.28
TMEM116-215ENST00000552374 GOLIM4O00461 696 aa13.28□□□□□ -0.28
TMEM116-215ENST00000552374 TBC1D12O60347 775 aa13.28□□□□□ -0.28
TMEM116-215ENST00000552374 IGSF3O75054 1194 aa13.28□□□□□ -0.28
TMEM116-215ENST00000552374 RRP1P56182 461 aaKnown RBP13.28□□□□□ -0.28
TMEM116-215ENST00000552374 TTF1Q15361 905 aaPredicted RBP13.28□□□□□ -0.28
TMEM116-215ENST00000552374 SCYL3Q8IZE3 742 aa13.28□□□□□ -0.28
TMEM116-215ENST00000552374 BOLA2Q9H3K6 86 aa13.28□□□□□ -0.28
TMEM116-215ENST00000552374 MYH13Q9UKX3 1938 aa13.27□□□□□ -0.28
TMEM116-215ENST00000552374 CTNND1O60716 968 aaKnown RBP13.27□□□□□ -0.29
TMEM116-215ENST00000552374 PTPRAP18433 802 aa13.27□□□□□ -0.29
TMEM116-215ENST00000552374 SP3Q02447 781 aa13.27□□□□□ -0.29
TMEM116-215ENST00000552374 PKN2Q16513 984 aaKnown RBP13.27□□□□□ -0.29
TMEM116-215ENST00000552374 SLC4A8Q2Y0W8 1093 aa13.27□□□□□ -0.29
TMEM116-215ENST00000552374 SLC9C2Q5TAH2 1124 aa13.27□□□□□ -0.29
TMEM116-215ENST00000552374 EDC3Q96F86 508 aaKnown RBP13.27□□□□□ -0.29
TMEM116-215ENST00000552374 PI4KBQ9UBF8 816 aa13.27□□□□□ -0.29
TMEM116-215ENST00000552374 SAP30BPQ9UHR5 308 aaKnown RBP13.27□□□□□ -0.29
TMEM116-215ENST00000552374 PALD1Q9ULE6 856 aa13.27□□□□□ -0.29
TMEM116-215ENST00000552374 AKAP11Q9UKA4 1901 aa13.27□□□□□ -0.29
TMEM116-215ENST00000552374 RFX7Q2KHR2 1363 aa13.27□□□□□ -0.29
TMEM116-215ENST00000552374 ATRNL1Q5VV63 1379 aa13.27□□□□□ -0.29
TMEM116-215ENST00000552374 MYH2Q9UKX2 1941 aa13.26□□□□□ -0.29
TMEM116-215ENST00000552374 USP5P45974 858 aa13.26□□□□□ -0.29
TMEM116-215ENST00000552374 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.26□□□□□ -0.29
TMEM116-215ENST00000552374 DHX36Q9H2U1 1008 aaKnown RBP13.26□□□□□ -0.29
TMEM116-215ENST00000552374 DCTPP1Q9H773 170 aa13.26□□□□□ -0.29
TMEM116-215ENST00000552374 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.26□□□□□ -0.29
TMEM116-215ENST00000552374 KCNH4Q9UQ05 1017 aa13.26□□□□□ -0.29
TMEM116-215ENST00000552374 TRIM17Q9Y577 477 aa13.26□□□□□ -0.29
TMEM116-215ENST00000552374 PCDHB15Q9Y5E8 787 aa13.26□□□□□ -0.29
TMEM116-215ENST00000552374 PDHXO00330 501 aa13.25□□□□□ -0.29
TMEM116-215ENST00000552374 CXCL11O14625 94 aa13.25□□□□□ -0.29
TMEM116-215ENST00000552374 ATP5JP18859 108 aa13.25□□□□□ -0.29
TMEM116-215ENST00000552374 CCDC84Q86UT8 332 aaPredicted RBP13.25□□□□□ -0.29
TMEM116-215ENST00000552374 FOXP4Q8IVH2 680 aaPredicted RBP13.25□□□□□ -0.29
TMEM116-215ENST00000552374 CRACR2BQ8N4Y2 399 aaPredicted RBP13.25□□□□□ -0.29
TMEM116-215ENST00000552374 CD99L2Q8TCZ2 262 aa13.25□□□□□ -0.29
TMEM116-215ENST00000552374 ERO1AQ96HE7 468 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms