RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 FAM155AB1AL88 458 aaPredicted RBP22.39■■□□□ 1.17
PRPF40B-216ENST00000552301 PDE6AP16499 860 aa22.39■■□□□ 1.17
PRPF40B-216ENST00000552301 PPP4CP60510 307 aa22.39■■□□□ 1.17
PRPF40B-216ENST00000552301 TSHZ3Q63HK5 1081 aa22.39■■□□□ 1.17
PRPF40B-216ENST00000552301 MIGA1Q8NAN2 632 aa22.39■■□□□ 1.17
PRPF40B-216ENST00000552301 CSRNP1Q96S65 589 aa22.39■■□□□ 1.17
PRPF40B-216ENST00000552301 CSADQ9Y600 493 aa22.39■■□□□ 1.17
PRPF40B-216ENST00000552301 NPM3O75607 178 aaKnown RBP22.38■■□□□ 1.17
PRPF40B-216ENST00000552301 MX1P20591 662 aa22.38■■□□□ 1.17
PRPF40B-216ENST00000552301 SMC5Q8IY18 1101 aa22.38■■□□□ 1.17
PRPF40B-216ENST00000552301 ZNF341Q9BYN7 854 aa22.38■■□□□ 1.17
PRPF40B-216ENST00000552301 DDX4Q9NQI0 724 aaKnown RBP22.38■■□□□ 1.17
PRPF40B-216ENST00000552301 MAP3K9P80192 1104 aa22.37■■□□□ 1.17
PRPF40B-216ENST00000552301 B4GALNT3Q6L9W6 998 aa22.37■■□□□ 1.17
PRPF40B-216ENST00000552301 MIGA2Q7L4E1 593 aa22.37■■□□□ 1.17
PRPF40B-216ENST00000552301 ZFPM1Q8IX07 1006 aa22.37■■□□□ 1.17
PRPF40B-216ENST00000552301 CLMNQ96JQ2 1002 aa22.37■■□□□ 1.17
PRPF40B-216ENST00000552301 WRNIP1Q96S55 665 aa22.37■■□□□ 1.17
PRPF40B-216ENST00000552301 ZNF532Q9HCE3 1301 aa22.36■■□□□ 1.17
PRPF40B-216ENST00000552301 GLRX3O76003 335 aaKnown RBP22.36■■□□□ 1.17
PRPF40B-216ENST00000552301 DYNLL1P63167 89 aaKnown RBP22.36■■□□□ 1.17
PRPF40B-216ENST00000552301 KIF23Q02241 960 aaPredicted RBP22.36■■□□□ 1.17
PRPF40B-216ENST00000552301 MKRN3Q13064 507 aaKnown RBP22.36■■□□□ 1.17
PRPF40B-216ENST00000552301 ZSCAN25Q6NSZ9 544 aa22.36■■□□□ 1.17
PRPF40B-216ENST00000552301 OTUD7AQ8TE49 926 aaPredicted RBP22.36■■□□□ 1.17
PRPF40B-216ENST00000552301 LNPKQ9C0E8 428 aa22.36■■□□□ 1.17
PRPF40B-216ENST00000552301 OSBPL5Q9H0X9 879 aaPredicted RBP22.36■■□□□ 1.17
PRPF40B-216ENST00000552301 OTOFQ9HC10 1997 aa22.36■■□□□ 1.17
PRPF40B-216ENST00000552301 MAGEB6P1A0A0J9YX57 407 aa22.35■■□□□ 1.17
PRPF40B-216ENST00000552301 IGHDP01880 384 aa22.35■■□□□ 1.17
PRPF40B-216ENST00000552301 MAPKAPK5Q8IW41 473 aa22.35■■□□□ 1.17
PRPF40B-216ENST00000552301 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.35■■□□□ 1.17
PRPF40B-216ENST00000552301 TGFBRAP1Q8WUH2 860 aa22.35■■□□□ 1.17
PRPF40B-216ENST00000552301 ELP3Q9H9T3 547 aa22.35■■□□□ 1.17
PRPF40B-216ENST00000552301 WBP1LQ9NX94 342 aa22.35■■□□□ 1.17
PRPF40B-216ENST00000552301 COL2A1P02458 1487 aaPredicted RBP22.34■■□□□ 1.17
PRPF40B-216ENST00000552301 DDTLA6NHG4 134 aaPredicted RBP22.34■■□□□ 1.17
PRPF40B-216ENST00000552301 USP5P45974 858 aa22.34■■□□□ 1.17
PRPF40B-216ENST00000552301 REM2Q8IYK8 340 aaPredicted RBP22.34■■□□□ 1.17
PRPF40B-216ENST00000552301 ZIC5Q96T25 663 aa22.34■■□□□ 1.17
PRPF40B-216ENST00000552301 ATRNL1Q5VV63 1379 aa22.34■■□□□ 1.17
PRPF40B-216ENST00000552301 MYH7P12883 1935 aa22.33■■□□□ 1.17
PRPF40B-216ENST00000552301 ADD2P35612 726 aa22.33■■□□□ 1.17
PRPF40B-216ENST00000552301 VGLL4Q14135 290 aa22.33■■□□□ 1.17
PRPF40B-216ENST00000552301 LRRFIP1Q32MZ4 808 aaKnown RBP22.33■■□□□ 1.17
PRPF40B-216ENST00000552301 SPRYD7Q5W111 196 aa22.33■■□□□ 1.17
PRPF40B-216ENST00000552301 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.33■■□□□ 1.17
PRPF40B-216ENST00000552301 SH3BP5LQ7L8J4 393 aa22.33■■□□□ 1.17
PRPF40B-216ENST00000552301 WNK4Q96J92 1243 aa22.33■■□□□ 1.17
PRPF40B-216ENST00000552301 FLT1P17948 1338 aa22.32■■□□□ 1.16
PRPF40B-216ENST00000552301 ZBTB48P10074 688 aaPredicted RBP22.32■■□□□ 1.16
PRPF40B-216ENST00000552301 CHD1LQ86WJ1 897 aa22.32■■□□□ 1.16
PRPF40B-216ENST00000552301 KBTBD3Q8NAB2 608 aa22.32■■□□□ 1.16
PRPF40B-216ENST00000552301 PI4K2BQ8TCG2 481 aa22.32■■□□□ 1.16
PRPF40B-216ENST00000552301 CRNKL1Q9BZJ0 848 aaKnown RBP22.32■■□□□ 1.16
PRPF40B-216ENST00000552301 DHX36Q9H2U1 1008 aaKnown RBP22.32■■□□□ 1.16
PRPF40B-216ENST00000552301 CDK5RAP2Q96SN8 1893 aa22.31■■□□□ 1.16
PRPF40B-216ENST00000552301 CA12O43570 354 aa22.31■■□□□ 1.16
PRPF40B-216ENST00000552301 SREBF2Q12772 1141 aa22.31■■□□□ 1.16
PRPF40B-216ENST00000552301 UBE3CQ15386 1083 aa22.31■■□□□ 1.16
PRPF40B-216ENST00000552301 TRIM34Q9BYJ4 488 aa22.31■■□□□ 1.16
PRPF40B-216ENST00000552301 FOCADQ5VW36 1801 aa22.3■■□□□ 1.16
PRPF40B-216ENST00000552301 TCRBV5S4A2TA0A5A2 114 aa22.3■■□□□ 1.16
PRPF40B-216ENST00000552301 HLA-DOAP06340 250 aa22.3■■□□□ 1.16
PRPF40B-216ENST00000552301 NUCB1Q02818 461 aa22.3■■□□□ 1.16
PRPF40B-216ENST00000552301 ZKSCAN4Q969J2 545 aaPredicted RBP22.3■■□□□ 1.16
PRPF40B-216ENST00000552301 OPTNQ96CV9 577 aa22.3■■□□□ 1.16
PRPF40B-216ENST00000552301 RIOK1Q9BRS2 568 aaKnown RBP22.3■■□□□ 1.16
PRPF40B-216ENST00000552301 SALL3Q9BXA9 1300 aa22.3■■□□□ 1.16
PRPF40B-216ENST00000552301 MANSC4A6NHS7 340 aaPredicted RBP22.29■■□□□ 1.16
PRPF40B-216ENST00000552301 INPP5BP32019 993 aa22.29■■□□□ 1.16
PRPF40B-216ENST00000552301 CTCFP49711 727 aaPredicted RBP22.29■■□□□ 1.16
PRPF40B-216ENST00000552301 PDE1AP54750 535 aa22.29■■□□□ 1.16
PRPF40B-216ENST00000552301 FSD1Q9BTV5 496 aa22.29■■□□□ 1.16
PRPF40B-216ENST00000552301 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.29■■□□□ 1.165e-6■■■□□ 17
PRPF40B-216ENST00000552301 PI4KBQ9UBF8 816 aa22.29■■□□□ 1.16
PRPF40B-216ENST00000552301 STAP2Q9UGK3 403 aa22.29■■□□□ 1.16
PRPF40B-216ENST00000552301 SAP30BPQ9UHR5 308 aaKnown RBP22.29■■□□□ 1.16
PRPF40B-216ENST00000552301 SNCAIPQ9Y6H5 919 aa22.29■■□□□ 1.16
PRPF40B-216ENST00000552301 FOXN1O15353 648 aa22.28■■□□□ 1.16
PRPF40B-216ENST00000552301 MBD4O95243 580 aa22.28■■□□□ 1.16
PRPF40B-216ENST00000552301 ZFYP08048 801 aaPredicted RBP22.28■■□□□ 1.16
PRPF40B-216ENST00000552301 ERO1BQ86YB8 467 aa22.28■■□□□ 1.16
PRPF40B-216ENST00000552301 LCORLQ8N3X6 602 aa22.28■■□□□ 1.16
PRPF40B-216ENST00000552301 CRACR2BQ8N4Y2 399 aaPredicted RBP22.28■■□□□ 1.16
PRPF40B-216ENST00000552301 OTUD5Q96G74 571 aa22.28■■□□□ 1.16
PRPF40B-216ENST00000552301 ZNF112Q9UJU3 913 aa22.28■■□□□ 1.16
PRPF40B-216ENST00000552301 SPDYE5A6NIY4 337 aa22.27■■□□□ 1.16
PRPF40B-216ENST00000552301 TBC1D12O60347 775 aa22.27■■□□□ 1.16
PRPF40B-216ENST00000552301 ARMT1Q9H993 441 aa22.27■■□□□ 1.16
PRPF40B-216ENST00000552301 PICK1Q9NRD5 415 aa22.27■■□□□ 1.16
PRPF40B-216ENST00000552301 HERC5Q9UII4 1024 aaKnown RBP22.27■■□□□ 1.16
PRPF40B-216ENST00000552301 PALD1Q9ULE6 856 aa22.27■■□□□ 1.16
PRPF40B-216ENST00000552301 MYH1P12882 1939 aa22.26■■□□□ 1.15
PRPF40B-216ENST00000552301 RNF113AO15541 343 aaKnown RBP22.26■■□□□ 1.15
PRPF40B-216ENST00000552301 CENPBP07199 599 aaPredicted RBP22.26■■□□□ 1.15
PRPF40B-216ENST00000552301 SLFNL1Q499Z3 407 aa22.26■■□□□ 1.15
PRPF40B-216ENST00000552301 NOL9Q5SY16 702 aaKnown RBP22.26■■□□□ 1.15
PRPF40B-216ENST00000552301 COL13A1Q5TAT6 717 aaPredicted RBP22.26■■□□□ 1.15
PRPF40B-216ENST00000552301 DDRGK1Q96HY6 314 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms