RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-216ENST00000552199 CHAF1AQ13111 956 aaPredicted RBP16.33■□□□□ 0.21
RAB3IP-216ENST00000552199 WTAPQ15007 396 aa16.33■□□□□ 0.21
RAB3IP-216ENST00000552199 PRR5LQ6MZQ0 368 aa16.33■□□□□ 0.21
RAB3IP-216ENST00000552199 TMED8Q6PL24 325 aaPredicted RBP16.33■□□□□ 0.21
RAB3IP-216ENST00000552199 RBM43Q6ZSC3 357 aaKnown RBP16.33■□□□□ 0.21
RAB3IP-216ENST00000552199 CCDC144CPQ8IYA2 1237 aa16.33■□□□□ 0.21
RAB3IP-216ENST00000552199 MYL10Q9BUA6 226 aa16.33■□□□□ 0.21
RAB3IP-216ENST00000552199 GJB4Q9NTQ9 266 aa16.33■□□□□ 0.21
RAB3IP-216ENST00000552199 BAZ2AQ9UIF9 1905 aaKnown RBP16.33■□□□□ 0.2
RAB3IP-216ENST00000552199 ERICH2A1L162 156 aa16.33■□□□□ 0.2
RAB3IP-216ENST00000552199 IARSP41252 1262 aaKnown RBP16.33■□□□□ 0.2
RAB3IP-216ENST00000552199 KIF23Q02241 960 aaPredicted RBP16.33■□□□□ 0.2
RAB3IP-216ENST00000552199 CCDC88AQ3V6T2 1871 aa16.33■□□□□ 0.2
RAB3IP-216ENST00000552199 STK11IPQ8N1F8 1099 aa16.33■□□□□ 0.2
RAB3IP-216ENST00000552199 PHKBQ93100 1093 aa16.33■□□□□ 0.2
RAB3IP-216ENST00000552199 ZKSCAN3Q9BRR0 538 aa16.33■□□□□ 0.2
RAB3IP-216ENST00000552199 ECM29Q5VYK3 1845 aa16.33■□□□□ 0.2
RAB3IP-216ENST00000552199 BRWD3Q6RI45 1802 aa16.32■□□□□ 0.2
RAB3IP-216ENST00000552199 CCAR1Q8IX12 1150 aaKnown RBP16.32■□□□□ 0.2
RAB3IP-216ENST00000552199 ESR2Q92731 530 aa16.32■□□□□ 0.2
RAB3IP-216ENST00000552199 ANKIB1Q9P2G1 1089 aa16.32■□□□□ 0.2
RAB3IP-216ENST00000552199 MAST2Q6P0Q8 1798 aa16.32■□□□□ 0.2
RAB3IP-216ENST00000552199 STK36Q9NRP7 1315 aa16.32■□□□□ 0.2
RAB3IP-216ENST00000552199 KIF28PB7ZC32 967 aa16.31■□□□□ 0.2
RAB3IP-216ENST00000552199 RANBP6O60518 1105 aaKnown RBP16.31■□□□□ 0.2
RAB3IP-216ENST00000552199 POLR3DP05423 398 aaPredicted RBP16.31■□□□□ 0.2
RAB3IP-216ENST00000552199 CLCN1P35523 988 aa16.31■□□□□ 0.2
RAB3IP-216ENST00000552199 MYSM1Q5VVJ2 828 aa16.31■□□□□ 0.2
RAB3IP-216ENST00000552199 KRT27Q7Z3Y8 459 aa16.31■□□□□ 0.2
RAB3IP-216ENST00000552199 AIFM3Q96NN9 605 aa16.31■□□□□ 0.2
RAB3IP-216ENST00000552199 IFNAR1P17181 557 aa16.31■□□□□ 0.2
RAB3IP-216ENST00000552199 PRDX5P30044 214 aa16.31■□□□□ 0.2
RAB3IP-216ENST00000552199 TYRO3Q06418 890 aa16.31■□□□□ 0.2
RAB3IP-216ENST00000552199 SSRP1Q08945 709 aaKnown RBP16.31■□□□□ 0.2
RAB3IP-216ENST00000552199 SPTY2D1Q68D10 685 aaPredicted RBP16.31■□□□□ 0.2
RAB3IP-216ENST00000552199 KRT40Q6A162 431 aa16.31■□□□□ 0.2
RAB3IP-216ENST00000552199 CKAP2LQ8IYA6 745 aa16.31■□□□□ 0.2
RAB3IP-216ENST00000552199 LINC00301Q8NCQ3 95 aa16.31■□□□□ 0.2
RAB3IP-216ENST00000552199 POLR3EQ9NVU0 708 aa16.31■□□□□ 0.2
RAB3IP-216ENST00000552199 XDHP47989 1333 aa16.3■□□□□ 0.2
RAB3IP-216ENST00000552199 SMIM22K7EJ46 135 aa16.3■□□□□ 0.2
RAB3IP-216ENST00000552199 FMNL1O95466 1100 aaPredicted RBP16.3■□□□□ 0.2
RAB3IP-216ENST00000552199 YEATS4O95619 227 aa16.3■□□□□ 0.2
RAB3IP-216ENST00000552199 SERPINB2P05120 415 aa16.3■□□□□ 0.2
RAB3IP-216ENST00000552199 FGRP09769 529 aa16.3■□□□□ 0.2
RAB3IP-216ENST00000552199 ME1P48163 572 aa16.3■□□□□ 0.2
RAB3IP-216ENST00000552199 RCAN1P53805 252 aa16.3■□□□□ 0.2
RAB3IP-216ENST00000552199 CRY2Q49AN0 593 aa16.3■□□□□ 0.2
RAB3IP-216ENST00000552199 CTR9Q6PD62 1173 aa16.3■□□□□ 0.2
RAB3IP-216ENST00000552199 ZSCAN30Q86W11 494 aa16.3■□□□□ 0.2
RAB3IP-216ENST00000552199 RPGRQ92834 1020 aaKnown RBP16.3■□□□□ 0.2
RAB3IP-216ENST00000552199 UBAC1Q9BSL1 405 aa16.3■□□□□ 0.2
RAB3IP-216ENST00000552199 CRNKL1Q9BZJ0 848 aaKnown RBP16.3■□□□□ 0.2
RAB3IP-216ENST00000552199 GOLPH3LQ9H4A5 285 aa16.3■□□□□ 0.2
RAB3IP-216ENST00000552199 CLIC4Q9Y696 253 aa16.3■□□□□ 0.2
RAB3IP-216ENST00000552199 DUOX1Q9NRD9 1551 aa16.3■□□□□ 0.2
RAB3IP-216ENST00000552199 MYH2Q9UKX2 1941 aa16.3■□□□□ 0.2
RAB3IP-216ENST00000552199 CYP2D7A0A087X1C5 515 aa16.29■□□□□ 0.2
RAB3IP-216ENST00000552199 IGSF3O75054 1194 aa16.29■□□□□ 0.2
RAB3IP-216ENST00000552199 TRIM37O94972 964 aa16.29■□□□□ 0.2
RAB3IP-216ENST00000552199 PCP11498 1178 aaKnown RBP16.29■□□□□ 0.2
RAB3IP-216ENST00000552199 ST5P78524 1137 aa16.29■□□□□ 0.2
RAB3IP-216ENST00000552199 SEC23AQ15436 765 aa16.29■□□□□ 0.2
RAB3IP-216ENST00000552199 RTN1Q16799 776 aa16.29■□□□□ 0.2
RAB3IP-216ENST00000552199 CCDC73Q6ZRK6 1079 aa16.29■□□□□ 0.2
RAB3IP-216ENST00000552199 C15orf52Q6ZUT6 534 aaKnown RBP16.29■□□□□ 0.2
RAB3IP-216ENST00000552199 SLC51AQ86UW1 340 aa16.29■□□□□ 0.2
RAB3IP-216ENST00000552199 SLC26A6Q9BXS9 759 aa16.29■□□□□ 0.2
RAB3IP-216ENST00000552199 AATFQ9NY61 560 aaKnown RBP eCLIP16.29■□□□□ 0.2
RAB3IP-216ENST00000552199 PCDHA7Q9UN72 937 aa16.29■□□□□ 0.2
RAB3IP-216ENST00000552199 MRVI1Q9Y6F6 885 aa16.29■□□□□ 0.2
RAB3IP-216ENST00000552199 KIAA1551Q9HCM1 1747 aa16.29■□□□□ 0.2
RAB3IP-216ENST00000552199 SNW1Q13573 536 aaKnown RBP16.29■□□□□ 0.2
RAB3IP-216ENST00000552199 STK38Q15208 465 aa16.29■□□□□ 0.2
RAB3IP-216ENST00000552199 ZNF654Q8IZM8 581 aa16.29■□□□□ 0.2
RAB3IP-216ENST00000552199 ENGASEQ8NFI3 743 aa16.29■□□□□ 0.2
RAB3IP-216ENST00000552199 TDRD7Q8NHU6 1098 aaKnown RBP16.29■□□□□ 0.2
RAB3IP-216ENST00000552199 KCNG4Q8TDN1 519 aa16.29■□□□□ 0.2
RAB3IP-216ENST00000552199 WASF1Q92558 559 aa16.29■□□□□ 0.2
RAB3IP-216ENST00000552199 ATP8A2Q9NTI2 1148 aa16.29■□□□□ 0.2
RAB3IP-216ENST00000552199 CCDC196A0A1B0GTZ2 297 aa16.28■□□□□ 0.2
RAB3IP-216ENST00000552199 A0A1W2PQ27 194 aa16.28■□□□□ 0.2
RAB3IP-216ENST00000552199 A0A1W2PQ64 194 aa16.28■□□□□ 0.2
RAB3IP-216ENST00000552199 A0A1W2PQD8 194 aa16.28■□□□□ 0.2
RAB3IP-216ENST00000552199 USP17L12C9JPN9 530 aa16.28■□□□□ 0.2
RAB3IP-216ENST00000552199 USP17L21D6R901 530 aa16.28■□□□□ 0.2
RAB3IP-216ENST00000552199 TRIM29Q14134 588 aa16.28■□□□□ 0.2
RAB3IP-216ENST00000552199 ADALQ6DHV7 355 aa16.28■□□□□ 0.2
RAB3IP-216ENST00000552199 WDR66Q8TBY9 1149 aa16.28■□□□□ 0.2
RAB3IP-216ENST00000552199 DCP1AQ9NPI6 582 aaPredicted RBP16.28■□□□□ 0.2
RAB3IP-216ENST00000552199 CCDC39Q9UFE4 941 aa16.28■□□□□ 0.2
RAB3IP-216ENST00000552199 USP25Q9UHP3 1055 aa16.28■□□□□ 0.2
RAB3IP-216ENST00000552199 TNKSO95271 1327 aa16.28■□□□□ 0.2
RAB3IP-216ENST00000552199 CTAGE5O15320 804 aa16.27■□□□□ 0.2
RAB3IP-216ENST00000552199 FAM160A1Q05DH4 1040 aa16.27■□□□□ 0.2
RAB3IP-216ENST00000552199 ANO1Q5XXA6 986 aa16.27■□□□□ 0.2
RAB3IP-216ENST00000552199 ZNF804AQ7Z570 1209 aa16.27■□□□□ 0.2
RAB3IP-216ENST00000552199 DZIP1Q86YF9 867 aaKnown RBP16.27■□□□□ 0.2
RAB3IP-216ENST00000552199 FSIP1Q8NA03 581 aa16.27■□□□□ 0.2
RAB3IP-216ENST00000552199 FANCBQ8NB91 859 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms