RNA–Protein interactions for RNA: ENST00000552003.1

SLC48A1-209, Transcript of solute carrier family 48 member 1, humanhuman

TSL 3

Gene SLC48A1, Length 882 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-209ENST00000552003 PNNQ9H307 717 aaKnown RBP13.13□□□□□ -0.31
SLC48A1-209ENST00000552003 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.13□□□□□ -0.31
SLC48A1-209ENST00000552003 AFG3L2Q9Y4W6 797 aa13.13□□□□□ -0.31
SLC48A1-209ENST00000552003 FRMPD3Q5JV73 1810 aa13.13□□□□□ -0.31
SLC48A1-209ENST00000552003 PHF20L1A8MW92 1017 aa13.12□□□□□ -0.31
SLC48A1-209ENST00000552003 PLIN1O60240 522 aa13.12□□□□□ -0.31
SLC48A1-209ENST00000552003 ZNF853P0CG23 659 aa13.12□□□□□ -0.31
SLC48A1-209ENST00000552003 PRKAR2AP13861 404 aaKnown RBP13.12□□□□□ -0.31
SLC48A1-209ENST00000552003 SMAD3P84022 425 aaKnown RBP13.12□□□□□ -0.31
SLC48A1-209ENST00000552003 TREML2Q5T2D2 321 aa13.12□□□□□ -0.31
SLC48A1-209ENST00000552003 GADL1Q6ZQY3 521 aa13.12□□□□□ -0.31
SLC48A1-209ENST00000552003 C8orf58Q8NAV2 365 aa13.12□□□□□ -0.31
SLC48A1-209ENST00000552003 ADAMTS19Q8TE59 1207 aa13.12□□□□□ -0.31
SLC48A1-209ENST00000552003 ZNF594Q96JF6 807 aaPredicted RBP13.12□□□□□ -0.31
SLC48A1-209ENST00000552003 ZDHHC15Q96MV8 337 aa13.12□□□□□ -0.31
SLC48A1-209ENST00000552003 NECAB3Q96P71 396 aaPredicted RBP13.12□□□□□ -0.31
SLC48A1-209ENST00000552003 IQSEC3Q9UPP2 1182 aaPredicted RBP13.12□□□□□ -0.31
SLC48A1-209ENST00000552003 SLC45A1Q9Y2W3 748 aa13.12□□□□□ -0.31
SLC48A1-209ENST00000552003 ZHX2Q9Y6X8 837 aa13.12□□□□□ -0.31
SLC48A1-209ENST00000552003 ATRNL1Q5VV63 1379 aa13.11□□□□□ -0.31
SLC48A1-209ENST00000552003 CCND3P30281 292 aaPredicted RBP13.11□□□□□ -0.31
SLC48A1-209ENST00000552003 FOXO4P98177 505 aa13.11□□□□□ -0.31
SLC48A1-209ENST00000552003 HDLBPQ00341 1268 aaKnown RBP13.11□□□□□ -0.31
SLC48A1-209ENST00000552003 NFIAQ12857 509 aa13.11□□□□□ -0.31
SLC48A1-209ENST00000552003 GCKRQ14397 625 aa13.11□□□□□ -0.31
SLC48A1-209ENST00000552003 CCDC84Q86UT8 332 aaPredicted RBP13.11□□□□□ -0.31
SLC48A1-209ENST00000552003 ZFPM1Q8IX07 1006 aa13.11□□□□□ -0.31
SLC48A1-209ENST00000552003 CCDC146Q8IYE0 955 aa13.11□□□□□ -0.31
SLC48A1-209ENST00000552003 SNX27Q96L92 541 aa13.11□□□□□ -0.31
SLC48A1-209ENST00000552003 LBHD1Q9BQE6 289 aaPredicted RBP13.11□□□□□ -0.31
SLC48A1-209ENST00000552003 CHD9Q3L8U1 2897 aa13.11□□□□□ -0.31
SLC48A1-209ENST00000552003 ANKRD18BA2A2Z9 1011 aa13.1□□□□□ -0.31
SLC48A1-209ENST00000552003 PEX10O60683 326 aa13.1□□□□□ -0.31
SLC48A1-209ENST00000552003 PTPRAP18433 802 aa13.1□□□□□ -0.31
SLC48A1-209ENST00000552003 HIBADHP31937 336 aaKnown RBP13.1□□□□□ -0.31
SLC48A1-209ENST00000552003 FAM110CQ1W6H9 321 aa13.1□□□□□ -0.31
SLC48A1-209ENST00000552003 G2E3Q7L622 706 aa13.1□□□□□ -0.31
SLC48A1-209ENST00000552003 FASTKD5Q7L8L6 764 aaKnown RBP13.1□□□□□ -0.31
SLC48A1-209ENST00000552003 SMCR8Q8TEV9 937 aaPredicted RBP13.1□□□□□ -0.31
SLC48A1-209ENST00000552003 FAM151AQ8WW52 585 aa13.1□□□□□ -0.31
SLC48A1-209ENST00000552003 TEKT1Q969V4 418 aa13.1□□□□□ -0.31
SLC48A1-209ENST00000552003 HOOK2Q96ED9 719 aa13.1□□□□□ -0.31
SLC48A1-209ENST00000552003 ASB2Q96Q27 587 aa13.1□□□□□ -0.31
SLC48A1-209ENST00000552003 UHRF1Q96T88 793 aaPredicted RBP13.1□□□□□ -0.31
SLC48A1-209ENST00000552003 RTN4Q9NQC3 1192 aaKnown RBP13.1□□□□□ -0.31
SLC48A1-209ENST00000552003 DDX58O95786 925 aaKnown RBP13.09□□□□□ -0.31
SLC48A1-209ENST00000552003 CYP2B6P20813 491 aa13.09□□□□□ -0.31
SLC48A1-209ENST00000552003 ATN1P54259 1190 aaPredicted RBP13.09□□□□□ -0.31
SLC48A1-209ENST00000552003 CACNB2Q08289 660 aaPredicted RBP13.09□□□□□ -0.31
SLC48A1-209ENST00000552003 TCP10Q12799 353 aa13.09□□□□□ -0.31
SLC48A1-209ENST00000552003 SENP6Q9GZR1 1112 aaPredicted RBP13.09□□□□□ -0.31
SLC48A1-209ENST00000552003 RLFQ13129 1914 aa13.08□□□□□ -0.32
SLC48A1-209ENST00000552003 CHAF1AQ13111 956 aaPredicted RBP13.08□□□□□ -0.32
SLC48A1-209ENST00000552003 EPHA10Q5JZY3 1008 aa13.08□□□□□ -0.32
SLC48A1-209ENST00000552003 POTEEQ6S8J3 1075 aa13.08□□□□□ -0.32
SLC48A1-209ENST00000552003 ATXN2LQ8WWM7 1075 aaKnown RBP13.08□□□□□ -0.32
SLC48A1-209ENST00000552003 LRFN3Q9BTN0 628 aa13.08□□□□□ -0.32
SLC48A1-209ENST00000552003 FAM198AQ9UFP1 575 aa13.08□□□□□ -0.32
SLC48A1-209ENST00000552003 DAGLAQ9Y4D2 1042 aa13.08□□□□□ -0.32
SLC48A1-209ENST00000552003 ARIH1Q9Y4X5 557 aaPredicted RBP13.08□□□□□ -0.32
SLC48A1-209ENST00000552003 EPHB4P54760 987 aa13.07□□□□□ -0.32
SLC48A1-209ENST00000552003 CCL14Q16627 93 aa13.07□□□□□ -0.32
SLC48A1-209ENST00000552003 FBXO33Q7Z6M2 555 aa13.07□□□□□ -0.32
SLC48A1-209ENST00000552003 ALYREFQ86V81 257 aaKnown RBP13.07□□□□□ -0.32
SLC48A1-209ENST00000552003 SCYL3Q8IZE3 742 aa13.07□□□□□ -0.32
SLC48A1-209ENST00000552003 TSPYL6Q8N831 410 aa13.07□□□□□ -0.32
SLC48A1-209ENST00000552003 PPM1EQ8WY54 764 aa13.07□□□□□ -0.32
SLC48A1-209ENST00000552003 BADQ92934 168 aa13.07□□□□□ -0.32
SLC48A1-209ENST00000552003 MRIQ9BWK5 157 aa13.07□□□□□ -0.32
SLC48A1-209ENST00000552003 TMOD2Q9NZR1 351 aa13.07□□□□□ -0.32
SLC48A1-209ENST00000552003 AGTPBP1Q9UPW5 1226 aa13.07□□□□□ -0.32
SLC48A1-209ENST00000552003 CHD7Q9P2D1 2997 aa13.07□□□□□ -0.32
SLC48A1-209ENST00000552003 TRIM75PA6NK02 468 aa13.06□□□□□ -0.32
SLC48A1-209ENST00000552003 RTP1P59025 263 aa13.06□□□□□ -0.32
SLC48A1-209ENST00000552003 IFIT5Q13325 482 aaKnown RBP13.06□□□□□ -0.32
SLC48A1-209ENST00000552003 CDC42EP5Q6NZY7 148 aa13.06□□□□□ -0.32
SLC48A1-209ENST00000552003 SH3BP5LQ7L8J4 393 aa13.06□□□□□ -0.32
SLC48A1-209ENST00000552003 SH3RF1Q7Z6J0 888 aa13.06□□□□□ -0.32
SLC48A1-209ENST00000552003 PUS3Q9BZE2 481 aaKnown RBP13.06□□□□□ -0.32
SLC48A1-209ENST00000552003 EPHX3Q9H6B9 360 aa13.06□□□□□ -0.32
SLC48A1-209ENST00000552003 CACNA1AO00555 2505 aa13.06□□□□□ -0.32
SLC48A1-209ENST00000552003 ITGB8P26012 769 aa13.05□□□□□ -0.32
SLC48A1-209ENST00000552003 NEXNQ0ZGT2 675 aa13.05□□□□□ -0.32
SLC48A1-209ENST00000552003 UBE4AQ14139 1066 aa13.05□□□□□ -0.32
SLC48A1-209ENST00000552003 HHIPL2Q6UWX4 724 aa13.05□□□□□ -0.32
SLC48A1-209ENST00000552003 LDHAL6AQ6ZMR3 332 aa13.05□□□□□ -0.32
SLC48A1-209ENST00000552003 USP6NLQ92738 828 aa13.05□□□□□ -0.32
SLC48A1-209ENST00000552003 DOCK1Q14185 1865 aa13.05□□□□□ -0.32
SLC48A1-209ENST00000552003 LOC285556D6RIA3 1793 aa13.04□□□□□ -0.32
SLC48A1-209ENST00000552003 DOCK2Q92608 1830 aa13.04□□□□□ -0.32
SLC48A1-209ENST00000552003 TRIM43BA6NCK2 446 aa13.04□□□□□ -0.32
SLC48A1-209ENST00000552003 PDE3AQ14432 1141 aa13.04□□□□□ -0.32
SLC48A1-209ENST00000552003 TRIM43Q96BQ3 446 aaPredicted RBP13.04□□□□□ -0.32
SLC48A1-209ENST00000552003 C1QTNF1Q9BXJ1 281 aa13.04□□□□□ -0.32
SLC48A1-209ENST00000552003 THEGQ9P2T0 379 aa13.04□□□□□ -0.32
SLC48A1-209ENST00000552003 XRCC5P13010 732 aaKnown RBP13.03□□□□□ -0.32
SLC48A1-209ENST00000552003 MAP3K10Q02779 954 aa13.03□□□□□ -0.32
SLC48A1-209ENST00000552003 ADGRE1Q14246 886 aa13.03□□□□□ -0.32
SLC48A1-209ENST00000552003 LMBR1LQ6UX01 489 aa13.03□□□□□ -0.32
SLC48A1-209ENST00000552003 TXNRD2Q9NNW7 524 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms