RNA–Protein interactions for RNA: ENST00000551355.5

NEK3-203, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-203ENST00000551355 CNOT7Q9UIV1 285 aaKnown RBP12.34□□□□□ -0.43
NEK3-203ENST00000551355 PALD1Q9ULE6 856 aa12.34□□□□□ -0.43
NEK3-203ENST00000551355 CYP46A1Q9Y6A2 500 aa12.34□□□□□ -0.43
NEK3-203ENST00000551355 CHD4Q14839 1912 aa12.34□□□□□ -0.43
NEK3-203ENST00000551355 FLT1P17948 1338 aa12.34□□□□□ -0.43
NEK3-203ENST00000551355 ZNF541Q9H0D2 1346 aa12.34□□□□□ -0.43
NEK3-203ENST00000551355 SCN9AQ15858 1988 aa12.33□□□□□ -0.44
NEK3-203ENST00000551355 USP17L12C9JPN9 530 aa12.33□□□□□ -0.44
NEK3-203ENST00000551355 USP17L21D6R901 530 aa12.33□□□□□ -0.44
NEK3-203ENST00000551355 E7EWF7 191 aa12.33□□□□□ -0.44
NEK3-203ENST00000551355 ENTPD3O75355 529 aa12.33□□□□□ -0.44
NEK3-203ENST00000551355 WDHD1O75717 1129 aaPredicted RBP12.33□□□□□ -0.44
NEK3-203ENST00000551355 POLR3DP05423 398 aaPredicted RBP12.33□□□□□ -0.44
NEK3-203ENST00000551355 LMOD1P29536 600 aaPredicted RBP12.33□□□□□ -0.44
NEK3-203ENST00000551355 PPARAQ07869 468 aa12.33□□□□□ -0.44
NEK3-203ENST00000551355 BECN1Q14457 450 aa12.33□□□□□ -0.44
NEK3-203ENST00000551355 AKNAD1Q5T1N1 836 aa12.33□□□□□ -0.44
NEK3-203ENST00000551355 BLOC1S2Q6QNY1 142 aa12.33□□□□□ -0.44
NEK3-203ENST00000551355 MFSD6Q6ZSS7 791 aa12.33□□□□□ -0.44
NEK3-203ENST00000551355 RUFY3Q7L099 469 aa12.33□□□□□ -0.44
NEK3-203ENST00000551355 RALYLQ86SE5 291 aaKnown RBP12.33□□□□□ -0.44
NEK3-203ENST00000551355 MICALL2Q8IY33 904 aa12.33□□□□□ -0.44
NEK3-203ENST00000551355 NCOA7Q8NI08 942 aa12.33□□□□□ -0.44
NEK3-203ENST00000551355 STAG1Q8WVM7 1258 aa12.33□□□□□ -0.44
NEK3-203ENST00000551355 SNX21Q969T3 373 aa12.33□□□□□ -0.44
NEK3-203ENST00000551355 ZBED3Q96IU2 234 aaPredicted RBP12.33□□□□□ -0.44
NEK3-203ENST00000551355 JAKMIP1Q96N16 626 aaKnown RBP12.33□□□□□ -0.44
NEK3-203ENST00000551355 PSME4Q14997 1843 aa12.32□□□□□ -0.44
NEK3-203ENST00000551355 MINDY4BA8MYZ0 360 aa12.32□□□□□ -0.44
NEK3-203ENST00000551355 CASTP20810 708 aaKnown RBP12.32□□□□□ -0.44
NEK3-203ENST00000551355 NEK4P51957 841 aa12.32□□□□□ -0.44
NEK3-203ENST00000551355 PDE4BQ07343 736 aa12.32□□□□□ -0.44
NEK3-203ENST00000551355 TNFAIP1Q13829 316 aa12.32□□□□□ -0.44
NEK3-203ENST00000551355 ANKRD1Q15327 319 aa12.32□□□□□ -0.44
NEK3-203ENST00000551355 SPDYE2Q495Y8 402 aa12.32□□□□□ -0.44
NEK3-203ENST00000551355 C12orf60Q5U649 245 aa12.32□□□□□ -0.44
NEK3-203ENST00000551355 MAPKAPK5Q8IW41 473 aa12.32□□□□□ -0.44
NEK3-203ENST00000551355 PRMT6Q96LA8 375 aaPredicted RBP12.32□□□□□ -0.44
NEK3-203ENST00000551355 MTA3Q9BTC8 594 aa12.32□□□□□ -0.44
NEK3-203ENST00000551355 ALDH8A1Q9H2A2 487 aaPredicted RBP12.32□□□□□ -0.44
NEK3-203ENST00000551355 GPRC5DQ9NZD1 345 aa12.32□□□□□ -0.44
NEK3-203ENST00000551355 WDR19Q8NEZ3 1342 aa12.32□□□□□ -0.44
NEK3-203ENST00000551355 HLA-DOAP06340 250 aa12.31□□□□□ -0.44
NEK3-203ENST00000551355 FGRP09769 529 aa12.31□□□□□ -0.44
NEK3-203ENST00000551355 TNNI2P48788 182 aa12.31□□□□□ -0.44
NEK3-203ENST00000551355 HAND2P61296 217 aa12.31□□□□□ -0.44
NEK3-203ENST00000551355 DHX32Q7L7V1 743 aaKnown RBP12.31□□□□□ -0.44
NEK3-203ENST00000551355 FAM83AQ86UY5 434 aa12.31□□□□□ -0.44
NEK3-203ENST00000551355 L3MBTL3Q96JM7 780 aaPredicted RBP12.31□□□□□ -0.44
NEK3-203ENST00000551355 OSBPL5Q9H0X9 879 aaPredicted RBP12.31□□□□□ -0.44
NEK3-203ENST00000551355 TDRD3Q9H7E2 651 aaKnown RBP12.31□□□□□ -0.44
NEK3-203ENST00000551355 FOXD4L1Q9NU39 408 aa12.31□□□□□ -0.44
NEK3-203ENST00000551355 ZNF70Q9UC06 446 aaPredicted RBP12.31□□□□□ -0.44
NEK3-203ENST00000551355 MYO5AQ9Y4I1 1855 aaKnown RBP12.31□□□□□ -0.44
NEK3-203ENST00000551355 ROBO3Q96MS0 1386 aa12.3□□□□□ -0.44
NEK3-203ENST00000551355 COL2A1P02458 1487 aaPredicted RBP12.3□□□□□ -0.44
NEK3-203ENST00000551355 GLTPD2A6NH11 291 aa12.3□□□□□ -0.44
NEK3-203ENST00000551355 WNT10BO00744 389 aa12.3□□□□□ -0.44
NEK3-203ENST00000551355 ORC4O43929 436 aa12.3□□□□□ -0.44
NEK3-203ENST00000551355 RPS6KB1P23443 525 aa12.3□□□□□ -0.44
NEK3-203ENST00000551355 MCM5P33992 734 aa12.3□□□□□ -0.44
NEK3-203ENST00000551355 PICALMQ13492 652 aa12.3□□□□□ -0.44
NEK3-203ENST00000551355 KIF4BQ2VIQ3 1234 aa12.3□□□□□ -0.44
NEK3-203ENST00000551355 ADCK5Q3MIX3 580 aa12.3□□□□□ -0.44
NEK3-203ENST00000551355 HSCBQ8IWL3 235 aa12.3□□□□□ -0.44
NEK3-203ENST00000551355 FBXL16Q8N461 479 aa12.3□□□□□ -0.44
NEK3-203ENST00000551355 ESR2Q92731 530 aa12.3□□□□□ -0.44
NEK3-203ENST00000551355 EHD4Q9H223 541 aa12.3□□□□□ -0.44
NEK3-203ENST00000551355 PDRG1Q9NUG6 133 aa12.3□□□□□ -0.44
NEK3-203ENST00000551355 DAXXQ9UER7 740 aaPredicted RBP12.3□□□□□ -0.44
NEK3-203ENST00000551355 SWAP70Q9UH65 585 aa12.3□□□□□ -0.44
NEK3-203ENST00000551355 ZNF646O15015 1829 aaPredicted RBP12.3□□□□□ -0.44
NEK3-203ENST00000551355 MYH2Q9UKX2 1941 aa12.29□□□□□ -0.44
NEK3-203ENST00000551355 IQCA1LA6NCM1 817 aa12.29□□□□□ -0.44
NEK3-203ENST00000551355 DDNO94850 711 aaPredicted RBP12.29□□□□□ -0.44
NEK3-203ENST00000551355 SART3Q15020 963 aaKnown RBP12.29□□□□□ -0.44
NEK3-203ENST00000551355 TBC1D10CQ8IV04 446 aa12.29□□□□□ -0.44
NEK3-203ENST00000551355 FOXP4Q8IVH2 680 aaPredicted RBP12.29□□□□□ -0.44
NEK3-203ENST00000551355 FAM151AQ8WW52 585 aa12.29□□□□□ -0.44
NEK3-203ENST00000551355 ADARB2Q9NS39 739 aaKnown RBP12.29□□□□□ -0.44
NEK3-203ENST00000551355 PI4KBQ9UBF8 816 aa12.29□□□□□ -0.44
NEK3-203ENST00000551355 ATRNL1Q5VV63 1379 aa12.29□□□□□ -0.44
NEK3-203ENST00000551355 FGD1P98174 961 aa12.28□□□□□ -0.44
NEK3-203ENST00000551355 EXOSC10Q01780 885 aaKnown RBP12.28□□□□□ -0.44
NEK3-203ENST00000551355 CTDSPL2Q05D32 466 aa12.28□□□□□ -0.44
NEK3-203ENST00000551355 NFIAQ12857 509 aa12.28□□□□□ -0.44
NEK3-203ENST00000551355 CCDC178Q5BJE1 867 aa12.28□□□□□ -0.44
NEK3-203ENST00000551355 STOX1Q6ZVD7 989 aa12.28□□□□□ -0.44
NEK3-203ENST00000551355 C16orf86Q6ZW13 317 aa12.28□□□□□ -0.44
NEK3-203ENST00000551355 APOBEC3FQ8IUX4 373 aaKnown RBP12.28□□□□□ -0.44
NEK3-203ENST00000551355 ZSCAN29Q8IWY8 852 aaPredicted RBP12.28□□□□□ -0.44
NEK3-203ENST00000551355 CHMP4CQ96CF2 233 aa12.28□□□□□ -0.44
NEK3-203ENST00000551355 HOOK2Q96ED9 719 aa12.28□□□□□ -0.44
NEK3-203ENST00000551355 TMEM87BQ96K49 555 aa12.28□□□□□ -0.44
NEK3-203ENST00000551355 UPF3BQ9BZI7 483 aaKnown RBP12.28□□□□□ -0.44
NEK3-203ENST00000551355 NBPF3Q9H094 633 aa12.28□□□□□ -0.44
NEK3-203ENST00000551355 MKNK2Q9HBH9 465 aa12.28□□□□□ -0.44
NEK3-203ENST00000551355 DDX4Q9NQI0 724 aaKnown RBP12.28□□□□□ -0.44
NEK3-203ENST00000551355 FAM198AQ9UFP1 575 aa12.28□□□□□ -0.44
NEK3-203ENST00000551355 SAP30BPQ9UHR5 308 aaKnown RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms