RNA–Protein interactions for RNA: ENST00000551261.5

LETMD1-229, Transcript of LETM1 domain containing 1, humanhuman

TSL 5

Gene LETMD1, Length 521 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-229ENST00000551261 KLHL34Q8N239 644 aa16.78■□□□□ 0.28
LETMD1-229ENST00000551261 NBPF3Q9H094 633 aa16.78■□□□□ 0.28
LETMD1-229ENST00000551261 BCS1LQ9Y276 419 aa16.78■□□□□ 0.28
LETMD1-229ENST00000551261 TAF6LQ9Y6J9 622 aa16.78■□□□□ 0.28
LETMD1-229ENST00000551261 COL2A1P02458 1487 aaPredicted RBP16.78■□□□□ 0.28
LETMD1-229ENST00000551261 PRC1O43663 620 aa16.77■□□□□ 0.28
LETMD1-229ENST00000551261 VIL1P09327 827 aaKnown RBP16.77■□□□□ 0.28
LETMD1-229ENST00000551261 DDIT3P35638 169 aa16.77■□□□□ 0.28
LETMD1-229ENST00000551261 CRKP46108 304 aa16.77■□□□□ 0.28
LETMD1-229ENST00000551261 RCAN1P53805 252 aa16.77■□□□□ 0.28
LETMD1-229ENST00000551261 RHBDL3P58872 404 aa16.77■□□□□ 0.28
LETMD1-229ENST00000551261 TOB2Q14106 344 aaPredicted RBP16.77■□□□□ 0.28
LETMD1-229ENST00000551261 TNIP1Q15025 636 aa16.77■□□□□ 0.28
LETMD1-229ENST00000551261 GRIK5Q16478 980 aa16.77■□□□□ 0.28
LETMD1-229ENST00000551261 CTR9Q6PD62 1173 aa16.77■□□□□ 0.28
LETMD1-229ENST00000551261 Q6ZUG5 572 aa16.77■□□□□ 0.28
LETMD1-229ENST00000551261 TMTC2Q8N394 836 aa16.77■□□□□ 0.28
LETMD1-229ENST00000551261 SH3RF3Q8TEJ3 882 aaPredicted RBP16.77■□□□□ 0.28
LETMD1-229ENST00000551261 ZNF274Q96GC6 653 aaPredicted RBP16.77■□□□□ 0.28
LETMD1-229ENST00000551261 ZNF277Q9NRM2 450 aaPredicted RBP16.77■□□□□ 0.28
LETMD1-229ENST00000551261 CDK5RAP2Q96SN8 1893 aa16.76■□□□□ 0.27
LETMD1-229ENST00000551261 NFKBIEO00221 500 aa16.76■□□□□ 0.27
LETMD1-229ENST00000551261 RPS12P25398 132 aaKnown RBP16.76■□□□□ 0.27
LETMD1-229ENST00000551261 CCDC178Q5BJE1 867 aa16.76■□□□□ 0.27
LETMD1-229ENST00000551261 OGFOD1Q8N543 542 aa16.76■□□□□ 0.27
LETMD1-229ENST00000551261 MCM9Q9NXL9 1143 aa16.76■□□□□ 0.27
LETMD1-229ENST00000551261 ANGEL1Q9UNK9 670 aaKnown RBP16.76■□□□□ 0.27
LETMD1-229ENST00000551261 ECM29Q5VYK3 1845 aa16.75■□□□□ 0.27
LETMD1-229ENST00000551261 FLT1P17948 1338 aa16.75■□□□□ 0.27
LETMD1-229ENST00000551261 ERICH2A1L162 156 aa16.75■□□□□ 0.27
LETMD1-229ENST00000551261 YDJCA8MPS7 323 aa16.75■□□□□ 0.27
LETMD1-229ENST00000551261 USP17L12C9JPN9 530 aa16.75■□□□□ 0.27
LETMD1-229ENST00000551261 USP17L21D6R901 530 aa16.75■□□□□ 0.27
LETMD1-229ENST00000551261 DHX16O60231 1041 aaKnown RBP16.75■□□□□ 0.27
LETMD1-229ENST00000551261 CPA1P15085 419 aa16.75■□□□□ 0.27
LETMD1-229ENST00000551261 LIFRP42702 1097 aa16.75■□□□□ 0.27
LETMD1-229ENST00000551261 NUCB2P80303 420 aa16.75■□□□□ 0.27
LETMD1-229ENST00000551261 C12orf60Q5U649 245 aa16.75■□□□□ 0.27
LETMD1-229ENST00000551261 BRF1Q92994 677 aa16.75■□□□□ 0.27
LETMD1-229ENST00000551261 BAZ2AQ9UIF9 1905 aaKnown RBP16.74■□□□□ 0.27
LETMD1-229ENST00000551261 NEDD4P46934 1319 aa16.74■□□□□ 0.27
LETMD1-229ENST00000551261 MINDY4BA8MYZ0 360 aa16.74■□□□□ 0.27
LETMD1-229ENST00000551261 SOCS7O14512 581 aa16.74■□□□□ 0.27
LETMD1-229ENST00000551261 CIAPIN1Q6FI81 312 aa16.74■□□□□ 0.27
LETMD1-229ENST00000551261 TTC6Q86TZ1 520 aa16.74■□□□□ 0.27
LETMD1-229ENST00000551261 SGMS1Q86VZ5 419 aa16.74■□□□□ 0.27
LETMD1-229ENST00000551261 IQCA1Q86XH1 822 aa16.74■□□□□ 0.27
LETMD1-229ENST00000551261 KIAA0825Q8IV33 1275 aa16.74■□□□□ 0.27
LETMD1-229ENST00000551261 TGFBRAP1Q8WUH2 860 aa16.74■□□□□ 0.27
LETMD1-229ENST00000551261 LLPHQ9BRT6 129 aaKnown RBP16.74■□□□□ 0.27
LETMD1-229ENST00000551261 SLKQ9H2G2 1235 aaPredicted RBP16.74■□□□□ 0.27
LETMD1-229ENST00000551261 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.74■□□□□ 0.27
LETMD1-229ENST00000551261 KIF3AQ9Y496 699 aa16.74■□□□□ 0.27
LETMD1-229ENST00000551261 COL4A5P29400 1685 aa16.73■□□□□ 0.27
LETMD1-229ENST00000551261 CTDSPL2Q05D32 466 aa16.73■□□□□ 0.27
LETMD1-229ENST00000551261 MTMR14Q8NCE2 650 aa16.73■□□□□ 0.27
LETMD1-229ENST00000551261 GTF3C6Q969F1 213 aa16.73■□□□□ 0.27
LETMD1-229ENST00000551261 GMLQ99445 158 aa16.73■□□□□ 0.27
LETMD1-229ENST00000551261 UBAC1Q9BSL1 405 aa16.73■□□□□ 0.27
LETMD1-229ENST00000551261 IDI2Q9BXS1 227 aa16.73■□□□□ 0.27
LETMD1-229ENST00000551261 DHX36Q9H2U1 1008 aaKnown RBP16.73■□□□□ 0.27
LETMD1-229ENST00000551261 TPCN1Q9ULQ1 816 aa16.73■□□□□ 0.27
LETMD1-229ENST00000551261 NID2Q14112 1375 aa16.73■□□□□ 0.27
LETMD1-229ENST00000551261 B4E1Z4 1266 aa16.72■□□□□ 0.27
LETMD1-229ENST00000551261 F8W031 263 aaPredicted RBP16.72■□□□□ 0.27
LETMD1-229ENST00000551261 SH2B2O14492 632 aaPredicted RBP16.72■□□□□ 0.27
LETMD1-229ENST00000551261 PFKFB2O60825 505 aa16.72■□□□□ 0.27
LETMD1-229ENST00000551261 KDM4AO75164 1064 aa16.72■□□□□ 0.27
LETMD1-229ENST00000551261 POLR3DP05423 398 aaPredicted RBP16.72■□□□□ 0.27
LETMD1-229ENST00000551261 PDCP20941 246 aa16.72■□□□□ 0.27
LETMD1-229ENST00000551261 ANTXR2P58335 489 aa16.72■□□□□ 0.27
LETMD1-229ENST00000551261 PPP2R5BQ15173 497 aa16.72■□□□□ 0.27
LETMD1-229ENST00000551261 ME3Q16798 604 aa16.72■□□□□ 0.27
LETMD1-229ENST00000551261 APOBEC3HQ6NTF7 200 aaKnown RBP16.72■□□□□ 0.27
LETMD1-229ENST00000551261 NLGN2Q8NFZ4 835 aa16.72■□□□□ 0.27
LETMD1-229ENST00000551261 FHDC1Q9C0D6 1143 aaPredicted RBP16.72■□□□□ 0.27
LETMD1-229ENST00000551261 EHD4Q9H223 541 aa16.72■□□□□ 0.27
LETMD1-229ENST00000551261 TOMM22Q9NS69 142 aa16.72■□□□□ 0.27
LETMD1-229ENST00000551261 USP40Q9NVE5 1235 aa16.72■□□□□ 0.27
LETMD1-229ENST00000551261 TMOD2Q9NZR1 351 aa16.72■□□□□ 0.27
LETMD1-229ENST00000551261 SWAP70Q9UH65 585 aa16.72■□□□□ 0.27
LETMD1-229ENST00000551261 PSMD14O00487 310 aa16.71■□□□□ 0.27
LETMD1-229ENST00000551261 HLA-DOAP06340 250 aa16.71■□□□□ 0.27
LETMD1-229ENST00000551261 EIF6P56537 245 aaKnown RBP16.71■□□□□ 0.27
LETMD1-229ENST00000551261 HMGN5P82970 282 aaKnown RBP16.71■□□□□ 0.27
LETMD1-229ENST00000551261 PPP4R3BQ5MIZ7 849 aa16.71■□□□□ 0.27
LETMD1-229ENST00000551261 FKBP1CQ5VVH2 108 aa16.71■□□□□ 0.27
LETMD1-229ENST00000551261 ILDR2Q71H61 639 aa16.71■□□□□ 0.27
LETMD1-229ENST00000551261 NOL8Q76FK4 1167 aaKnown RBP16.71■□□□□ 0.27
LETMD1-229ENST00000551261 MAPKAPK5Q8IW41 473 aa16.71■□□□□ 0.27
LETMD1-229ENST00000551261 RGS22Q8NE09 1264 aa16.71■□□□□ 0.27
LETMD1-229ENST00000551261 SMC3Q9UQE7 1217 aa16.71■□□□□ 0.27
LETMD1-229ENST00000551261 MYH1P12882 1939 aa16.7■□□□□ 0.26
LETMD1-229ENST00000551261 FZD9O00144 591 aa16.7■□□□□ 0.26
LETMD1-229ENST00000551261 ENTPD3O75355 529 aa16.7■□□□□ 0.26
LETMD1-229ENST00000551261 WDHD1O75717 1129 aaPredicted RBP16.7■□□□□ 0.26
LETMD1-229ENST00000551261 USP17L8P0C7I0 530 aa16.7■□□□□ 0.26
LETMD1-229ENST00000551261 SCNN1DP51172 638 aa16.7■□□□□ 0.26
LETMD1-229ENST00000551261 TMEM67Q5HYA8 995 aa16.7■□□□□ 0.26
LETMD1-229ENST00000551261 CDC42EP5Q6NZY7 148 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms