RNA–Protein interactions for RNA: ENST00000551242.5

ERBB3-219, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 2,755 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-219ENST00000551242 PPFIA4O75335 1185 aa13.96□□□□□ -0.17
ERBB3-219ENST00000551242 RFX5P48382 616 aaPredicted RBP13.96□□□□□ -0.17
ERBB3-219ENST00000551242 RBL2Q08999 1139 aa13.96□□□□□ -0.17
ERBB3-219ENST00000551242 PTPAQ15257 358 aa13.96□□□□□ -0.17
ERBB3-219ENST00000551242 GRAMD1CQ8IYS0 662 aa13.96□□□□□ -0.17
ERBB3-219ENST00000551242 THEMISQ8N1K5 641 aaPredicted RBP13.96□□□□□ -0.17
ERBB3-219ENST00000551242 ABTB2Q8N961 1025 aa13.96□□□□□ -0.17
ERBB3-219ENST00000551242 MAN1B1Q9UKM7 699 aa13.96□□□□□ -0.17
ERBB3-219ENST00000551242 CTAGE15A4D2H0 777 aa13.95□□□□□ -0.18
ERBB3-219ENST00000551242 PRC1O43663 620 aa13.95□□□□□ -0.18
ERBB3-219ENST00000551242 PRR29P0C7W0 189 aa13.95□□□□□ -0.18
ERBB3-219ENST00000551242 CTAGE8P0CG41 777 aa13.95□□□□□ -0.18
ERBB3-219ENST00000551242 RXRAP19793 462 aa13.95□□□□□ -0.18
ERBB3-219ENST00000551242 RESP18Q5W5W9 173 aa13.95□□□□□ -0.18
ERBB3-219ENST00000551242 CTAGE6Q86UF2 777 aa13.95□□□□□ -0.18
ERBB3-219ENST00000551242 CTAGE4Q8IX94 777 aa13.95□□□□□ -0.18
ERBB3-219ENST00000551242 ZMYM1Q5SVZ6 1142 aa13.95□□□□□ -0.18
ERBB3-219ENST00000551242 NCAPH2Q6IBW4 605 aa13.95□□□□□ -0.18
ERBB3-219ENST00000551242 TADA2BQ86TJ2 420 aa13.95□□□□□ -0.18
ERBB3-219ENST00000551242 ACRBPQ8NEB7 543 aa13.95□□□□□ -0.18
ERBB3-219ENST00000551242 LRRC59Q96AG4 307 aaKnown RBP13.95□□□□□ -0.18
ERBB3-219ENST00000551242 HELLSQ9NRZ9 838 aa13.95□□□□□ -0.18
ERBB3-219ENST00000551242 M0R2C6 588 aa13.94□□□□□ -0.18
ERBB3-219ENST00000551242 MYO1BO43795 1136 aa13.94□□□□□ -0.18
ERBB3-219ENST00000551242 PIP4K2AP48426 406 aaPredicted RBP13.94□□□□□ -0.18
ERBB3-219ENST00000551242 TIMM10P62072 90 aa13.94□□□□□ -0.18
ERBB3-219ENST00000551242 NR1I3Q14994 352 aa13.94□□□□□ -0.18
ERBB3-219ENST00000551242 DNAJC21Q5F1R6 531 aaKnown RBP13.94□□□□□ -0.18
ERBB3-219ENST00000551242 EFCAB13Q8IY85 973 aa13.94□□□□□ -0.18
ERBB3-219ENST00000551242 RABEP2Q9H5N1 569 aa13.94□□□□□ -0.18
ERBB3-219ENST00000551242 RFX7Q2KHR2 1363 aa13.94□□□□□ -0.18
ERBB3-219ENST00000551242 KDM3BQ7LBC6 1761 aa13.94□□□□□ -0.18
ERBB3-219ENST00000551242 UBR1Q8IWV7 1749 aa13.94□□□□□ -0.18
ERBB3-219ENST00000551242 SYF2O95926 243 aaKnown RBP13.94□□□□□ -0.18
ERBB3-219ENST00000551242 CHRM1P11229 460 aaPredicted RBP13.94□□□□□ -0.18
ERBB3-219ENST00000551242 LIG3P49916 1009 aa13.94□□□□□ -0.18
ERBB3-219ENST00000551242 NEXNQ0ZGT2 675 aa13.94□□□□□ -0.18
ERBB3-219ENST00000551242 PDIA6Q15084 440 aa13.94□□□□□ -0.18
ERBB3-219ENST00000551242 PLEKHO1Q53GL0 409 aaPredicted RBP13.94□□□□□ -0.18
ERBB3-219ENST00000551242 UBE3BQ7Z3V4 1068 aa13.94□□□□□ -0.18
ERBB3-219ENST00000551242 MSL3Q8N5Y2 521 aaKnown RBP13.94□□□□□ -0.18
ERBB3-219ENST00000551242 AFAP1L1Q8TED9 768 aa13.94□□□□□ -0.18
ERBB3-219ENST00000551242 PIK3C2AO00443 1686 aa13.94□□□□□ -0.18
ERBB3-219ENST00000551242 MRC1P22897 1456 aa13.94□□□□□ -0.18
ERBB3-219ENST00000551242 AKAP17AQ02040 695 aaKnown RBP13.94□□□□□ -0.18
ERBB3-219ENST00000551242 SLC9C2Q5TAH2 1124 aa13.94□□□□□ -0.18
ERBB3-219ENST00000551242 MMS22LQ6ZRQ5 1243 aa13.94□□□□□ -0.18
ERBB3-219ENST00000551242 ARHGEF25Q86VW2 580 aa13.94□□□□□ -0.18
ERBB3-219ENST00000551242 JMYQ8N9B5 988 aa13.94□□□□□ -0.18
ERBB3-219ENST00000551242 IGSF22Q8N9C0 903 aa13.94□□□□□ -0.18
ERBB3-219ENST00000551242 KAT2BQ92831 832 aa13.94□□□□□ -0.18
ERBB3-219ENST00000551242 MAP3K14Q99558 947 aa13.94□□□□□ -0.18
ERBB3-219ENST00000551242 ALG1Q9BT22 464 aa13.94□□□□□ -0.18
ERBB3-219ENST00000551242 MED4Q9NPJ6 270 aa13.94□□□□□ -0.18
ERBB3-219ENST00000551242 DDX21Q9NR30 783 aaKnown RBP eCLIP13.94□□□□□ -0.18
ERBB3-219ENST00000551242 PPP6R2O75170 966 aa13.93□□□□□ -0.18
ERBB3-219ENST00000551242 KCNA6P17658 529 aa13.93□□□□□ -0.18
ERBB3-219ENST00000551242 MDM2Q00987 491 aaPredicted RBP13.93□□□□□ -0.18
ERBB3-219ENST00000551242 GRIN1Q05586 938 aa13.93□□□□□ -0.18
ERBB3-219ENST00000551242 HSP90AB3PQ58FF7 597 aa13.93□□□□□ -0.18
ERBB3-219ENST00000551242 KRT40Q6A162 431 aa13.93□□□□□ -0.18
ERBB3-219ENST00000551242 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.93□□□□□ -0.18
ERBB3-219ENST00000551242 PPFIBP1Q86W92 1011 aa13.93□□□□□ -0.18
ERBB3-219ENST00000551242 PHKBQ93100 1093 aa13.93□□□□□ -0.18
ERBB3-219ENST00000551242 PANX2Q96RD6 677 aa13.93□□□□□ -0.18
ERBB3-219ENST00000551242 UBE2Q2LH0YL09 131 aa13.93□□□□□ -0.18
ERBB3-219ENST00000551242 RNMTO43148 476 aaKnown RBP13.93□□□□□ -0.18
ERBB3-219ENST00000551242 ANTXR2P58335 489 aa13.93□□□□□ -0.18
ERBB3-219ENST00000551242 AKAP4Q5JQC9 854 aa13.93□□□□□ -0.18
ERBB3-219ENST00000551242 NUTM2AQ8IVF1 878 aaPredicted RBP13.93□□□□□ -0.18
ERBB3-219ENST00000551242 XAGE3Q8WTP9 111 aa13.93□□□□□ -0.18
ERBB3-219ENST00000551242 OSBP2Q969R2 916 aa13.93□□□□□ -0.18
ERBB3-219ENST00000551242 SEC31BQ9NQW1 1179 aa13.93□□□□□ -0.18
ERBB3-219ENST00000551242 MED1Q15648 1581 aaPredicted RBP13.93□□□□□ -0.18
ERBB3-219ENST00000551242 ANKARQ7Z5J8 1434 aa13.92□□□□□ -0.18
ERBB3-219ENST00000551242 POSTNQ15063 836 aa13.92□□□□□ -0.18
ERBB3-219ENST00000551242 MCTP2Q6DN12 878 aa13.92□□□□□ -0.18
ERBB3-219ENST00000551242 ENOX1Q8TC92 643 aaKnown RBP13.92□□□□□ -0.18
ERBB3-219ENST00000551242 NAPGQ99747 312 aaPredicted RBP13.92□□□□□ -0.18
ERBB3-219ENST00000551242 GBP3Q9H0R5 595 aa13.92□□□□□ -0.18
ERBB3-219ENST00000551242 DENND2AQ9ULE3 1009 aa13.92□□□□□ -0.18
ERBB3-219ENST00000551242 A0A087WUV0 522 aaPredicted RBP13.92□□□□□ -0.18
ERBB3-219ENST00000551242 EXOC5O00471 708 aa13.92□□□□□ -0.18
ERBB3-219ENST00000551242 ZMYND10O75800 440 aa13.92□□□□□ -0.18
ERBB3-219ENST00000551242 PRPF6O94906 941 aaKnown RBP13.92□□□□□ -0.18
ERBB3-219ENST00000551242 CPP00450 1065 aa13.92□□□□□ -0.18
ERBB3-219ENST00000551242 CASP14P31944 242 aa13.92□□□□□ -0.18
ERBB3-219ENST00000551242 STX17P56962 302 aa13.92□□□□□ -0.18
ERBB3-219ENST00000551242 KLHL10Q6JEL2 608 aa13.92□□□□□ -0.18
ERBB3-219ENST00000551242 COPS6Q7L5N1 327 aa13.92□□□□□ -0.18
ERBB3-219ENST00000551242 EHD4Q9H223 541 aa13.92□□□□□ -0.18
ERBB3-219ENST00000551242 ACBD3Q9H3P7 528 aa13.92□□□□□ -0.18
ERBB3-219ENST00000551242 SERTAD1Q9UHV2 236 aa13.92□□□□□ -0.18
ERBB3-219ENST00000551242 PLEKHG1Q9ULL1 1385 aa13.91□□□□□ -0.18
ERBB3-219ENST00000551242 A0A1B0GTH6 734 aa13.91□□□□□ -0.18
ERBB3-219ENST00000551242 ATP5J2-PTCD1G3V325 749 aa13.91□□□□□ -0.18
ERBB3-219ENST00000551242 POLR2DO15514 142 aaKnown RBP13.91□□□□□ -0.18
ERBB3-219ENST00000551242 PTCD1O75127 700 aaKnown RBP13.91□□□□□ -0.18
ERBB3-219ENST00000551242 CCT5P48643 541 aa13.91□□□□□ -0.18
ERBB3-219ENST00000551242 TTC39AQ5SRH9 613 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms