RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 A0A096LPE4 126 aa7.71□□□□□ -1.18
SCAF11-214ENST00000550893 A0A1W2PPZ6 126 aa7.71□□□□□ -1.18
SCAF11-214ENST00000550893 EIF1AYO14602 144 aaKnown RBP7.71□□□□□ -1.18
SCAF11-214ENST00000550893 ESRRAP11474 423 aaPredicted RBP7.71□□□□□ -1.18
SCAF11-214ENST00000550893 GRIA4P48058 902 aa7.71□□□□□ -1.18
SCAF11-214ENST00000550893 KCNA1Q09470 495 aa7.71□□□□□ -1.18
SCAF11-214ENST00000550893 SPRED3Q2MJR0 410 aa7.71□□□□□ -1.18
SCAF11-214ENST00000550893 PRSS36Q5K4E3 855 aa7.71□□□□□ -1.18
SCAF11-214ENST00000550893 KIAA0319Q5VV43 1072 aa7.71□□□□□ -1.18
SCAF11-214ENST00000550893 TMC7Q7Z402 723 aa7.71□□□□□ -1.18
SCAF11-214ENST00000550893 ALKBH8Q96BT7 664 aaKnown RBP7.71□□□□□ -1.18
SCAF11-214ENST00000550893 UBL7Q96S82 380 aaPredicted RBP7.71□□□□□ -1.18
SCAF11-214ENST00000550893 TRAIPQ9BWF2 469 aa7.71□□□□□ -1.18
SCAF11-214ENST00000550893 DNAJC25Q9H1X3 360 aa7.71□□□□□ -1.18
SCAF11-214ENST00000550893 UBR1Q8IWV7 1749 aa7.71□□□□□ -1.18
SCAF11-214ENST00000550893 UNC13BO14795 1591 aa7.71□□□□□ -1.18
SCAF11-214ENST00000550893 SYNMO15061 1565 aa7.71□□□□□ -1.18
SCAF11-214ENST00000550893 MYO5BQ9ULV0 1848 aa7.71□□□□□ -1.18
SCAF11-214ENST00000550893 DHX29Q7Z478 1369 aaKnown RBP7.71□□□□□ -1.18
SCAF11-214ENST00000550893 PZPP20742 1482 aa7.7□□□□□ -1.18
SCAF11-214ENST00000550893 DUOX2Q9NRD8 1548 aa7.7□□□□□ -1.18
SCAF11-214ENST00000550893 MLECQ14165 292 aa7.7□□□□□ -1.18
SCAF11-214ENST00000550893 CCDC74AQ96AQ1 378 aa7.7□□□□□ -1.18
SCAF11-214ENST00000550893 CSRNP1Q96S65 589 aa7.7□□□□□ -1.18
SCAF11-214ENST00000550893 CFAP65Q6ZU64 1925 aaKnown RBP7.7□□□□□ -1.18
SCAF11-214ENST00000550893 NCOA1Q15788 1441 aa7.69□□□□□ -1.18
SCAF11-214ENST00000550893 CNTLNQ9NXG0 1405 aa7.69□□□□□ -1.18
SCAF11-214ENST00000550893 MAPK1P28482 360 aa7.69□□□□□ -1.18
SCAF11-214ENST00000550893 HSPA2P54652 639 aa7.69□□□□□ -1.18
SCAF11-214ENST00000550893 PRR23CQ6ZRP0 262 aa7.69□□□□□ -1.18
SCAF11-214ENST00000550893 EHD4Q9H223 541 aa7.69□□□□□ -1.18
SCAF11-214ENST00000550893 ARID4BQ4LE39 1312 aaPredicted RBP7.69□□□□□ -1.18
SCAF11-214ENST00000550893 LMTK2Q8IWU2 1503 aa7.68□□□□□ -1.18
SCAF11-214ENST00000550893 ALKQ9UM73 1620 aa7.68□□□□□ -1.18
SCAF11-214ENST00000550893 CEP41Q9BYV8 373 aa7.68□□□□□ -1.18
SCAF11-214ENST00000550893 SOX17Q9H6I2 414 aaPredicted RBP7.68□□□□□ -1.18
SCAF11-214ENST00000550893 EFCAB6Q5THR3 1501 aa7.68□□□□□ -1.18
SCAF11-214ENST00000550893 PIK3C2BO00750 1634 aa7.67□□□□□ -1.18
SCAF11-214ENST00000550893 GCC2Q8IWJ2 1684 aa7.67□□□□□ -1.18
SCAF11-214ENST00000550893 XIRP1Q702N8 1843 aaKnown RBP7.67□□□□□ -1.18
SCAF11-214ENST00000550893 PCDH1Q08174 1060 aa7.67□□□□□ -1.18
SCAF11-214ENST00000550893 ZNF423Q2M1K9 1284 aa7.67□□□□□ -1.18
SCAF11-214ENST00000550893 EPS8L3Q8TE67 593 aaKnown RBP7.67□□□□□ -1.18
SCAF11-214ENST00000550893 RUSC1Q9BVN2 902 aa7.67□□□□□ -1.18
SCAF11-214ENST00000550893 CLEC4MQ9H2X3 399 aaPredicted RBP7.67□□□□□ -1.18
SCAF11-214ENST00000550893 ZMYM3Q14202 1370 aa7.67□□□□□ -1.18
SCAF11-214ENST00000550893 ERVK-7P63135 1459 aa7.67□□□□□ -1.18
SCAF11-214ENST00000550893 E9PCH4 1651 aa7.67□□□□□ -1.18
SCAF11-214ENST00000550893 GADD45BO75293 160 aaPredicted RBP7.66□□□□□ -1.18
SCAF11-214ENST00000550893 GSTM4Q03013 218 aa7.66□□□□□ -1.18
SCAF11-214ENST00000550893 DSC3Q14574 896 aa7.66□□□□□ -1.18
SCAF11-214ENST00000550893 ZMYM1Q5SVZ6 1142 aa7.66□□□□□ -1.18
SCAF11-214ENST00000550893 ARMC10Q8N2F6 343 aa7.66□□□□□ -1.18
SCAF11-214ENST00000550893 FAM46AQ96IP4 442 aaKnown RBP7.66□□□□□ -1.18
SCAF11-214ENST00000550893 USP26Q9BXU7 913 aa7.66□□□□□ -1.18
SCAF11-214ENST00000550893 KRTAP9-2Q9BYQ4 174 aa7.66□□□□□ -1.18
SCAF11-214ENST00000550893 RNF208Q9H0X6 261 aa7.66□□□□□ -1.18
SCAF11-214ENST00000550893 UHRF1BP1Q6BDS2 1440 aa7.66□□□□□ -1.18
SCAF11-214ENST00000550893 ERBINQ96RT1 1412 aa7.66□□□□□ -1.18
SCAF11-214ENST00000550893 A2ML1A8K2U0 1454 aa7.66□□□□□ -1.18
SCAF11-214ENST00000550893 PLA2R1Q13018 1463 aa7.66□□□□□ -1.18
SCAF11-214ENST00000550893 IQGAP3Q86VI3 1631 aa7.66□□□□□ -1.18
SCAF11-214ENST00000550893 TET3O43151 1660 aa7.66□□□□□ -1.18
SCAF11-214ENST00000550893 KDM5AP29375 1690 aaKnown RBP7.66□□□□□ -1.18
SCAF11-214ENST00000550893 LOC100289279A0A1B0GTE1 492 aa7.65□□□□□ -1.18
SCAF11-214ENST00000550893 PLCB3Q01970 1234 aa7.65□□□□□ -1.18
SCAF11-214ENST00000550893 ABCB6Q9NP58 842 aa7.65□□□□□ -1.18
SCAF11-214ENST00000550893 KIF15Q9NS87 1388 aa7.64□□□□□ -1.19
SCAF11-214ENST00000550893 MEGF11A6BM72 1044 aa7.64□□□□□ -1.19
SCAF11-214ENST00000550893 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.64□□□□□ -1.19
SCAF11-214ENST00000550893 TREHO43280 583 aa7.64□□□□□ -1.19
SCAF11-214ENST00000550893 DLGAP3O95886 979 aa7.64□□□□□ -1.19
SCAF11-214ENST00000550893 ITPKAP23677 461 aa7.64□□□□□ -1.19
SCAF11-214ENST00000550893 ANKRD34AQ69YU3 496 aa7.64□□□□□ -1.19
SCAF11-214ENST00000550893 PI16Q6UXB8 463 aa7.64□□□□□ -1.19
SCAF11-214ENST00000550893 NRSN2Q9GZP1 204 aa7.64□□□□□ -1.19
SCAF11-214ENST00000550893 ZNF576Q9H609 170 aa7.64□□□□□ -1.19
SCAF11-214ENST00000550893 DHX15O43143 795 aaKnown RBP7.63□□□□□ -1.19
SCAF11-214ENST00000550893 PREPP48147 710 aa7.63□□□□□ -1.19
SCAF11-214ENST00000550893 GRM2Q14416 872 aa7.63□□□□□ -1.19
SCAF11-214ENST00000550893 UVSSAQ2YD98 709 aa7.63□□□□□ -1.19
SCAF11-214ENST00000550893 PRPF40BQ6NWY9 871 aaKnown RBP7.63□□□□□ -1.19
SCAF11-214ENST00000550893 GLIS3Q8NEA6 775 aa7.63□□□□□ -1.19
SCAF11-214ENST00000550893 UTP4Q969X6 686 aaKnown RBP7.63□□□□□ -1.19
SCAF11-214ENST00000550893 TMPRSS13Q9BYE2 586 aa7.63□□□□□ -1.19
SCAF11-214ENST00000550893 RAXQ9Y2V3 346 aa7.63□□□□□ -1.19
SCAF11-214ENST00000550893 IQGAP1P46940 1657 aa7.63□□□□□ -1.19
SCAF11-214ENST00000550893 UGGT1Q9NYU2 1555 aa7.63□□□□□ -1.19
SCAF11-214ENST00000550893 ARHGAP23Q9P227 1491 aa7.62□□□□□ -1.19
SCAF11-214ENST00000550893 ARHGAP31Q2M1Z3 1444 aa7.62□□□□□ -1.19
SCAF11-214ENST00000550893 RRBP1Q9P2E9 1410 aaKnown RBP7.62□□□□□ -1.19
SCAF11-214ENST00000550893 PNMA6FA0A0J9YX94 578 aa7.62□□□□□ -1.19
SCAF11-214ENST00000550893 TMEM238LA0A1B0GVL6 79 aa7.62□□□□□ -1.19
SCAF11-214ENST00000550893 SART1O43290 800 aaKnown RBP7.62□□□□□ -1.19
SCAF11-214ENST00000550893 ENOX2Q16206 610 aaKnown RBP7.62□□□□□ -1.19
SCAF11-214ENST00000550893 FDX2Q6P4F2 183 aa7.62□□□□□ -1.19
SCAF11-214ENST00000550893 MYRFLQ96LU7 910 aa7.62□□□□□ -1.19
SCAF11-214ENST00000550893 TRAK1Q9UPV9 953 aa7.62□□□□□ -1.19
SCAF11-214ENST00000550893 PTPRTO14522 1441 aa7.61□□□□□ -1.19
SCAF11-214ENST00000550893 KRTAP9-6A0A140TA67 174 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms