RNA–Protein interactions for RNA: ENST00000550891.4

SCN8A-206, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best)

Gene SCN8A, Length 3,253 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-206ENST00000550891 ADD1P35611 737 aaKnown RBP18.11■□□□□ 0.49
SCN8A-206ENST00000550891 GNL2Q13823 731 aaKnown RBP18.11■□□□□ 0.49
SCN8A-206ENST00000550891 AMOTL1Q8IY63 956 aa18.11■□□□□ 0.49
SCN8A-206ENST00000550891 LEO1Q8WVC0 666 aaPredicted RBP18.11■□□□□ 0.49
SCN8A-206ENST00000550891 IGSF3O75054 1194 aa18.1■□□□□ 0.49
SCN8A-206ENST00000550891 BAG3O95817 575 aa18.1■□□□□ 0.49
SCN8A-206ENST00000550891 LDHCP07864 332 aa18.1■□□□□ 0.49
SCN8A-206ENST00000550891 IARSP41252 1262 aaKnown RBP18.1■□□□□ 0.49
SCN8A-206ENST00000550891 IQCA1Q86XH1 822 aa18.1■□□□□ 0.49
SCN8A-206ENST00000550891 TDRD7Q8NHU6 1098 aaKnown RBP18.1■□□□□ 0.49
SCN8A-206ENST00000550891 GPR101Q96P66 508 aaPredicted RBP18.1■□□□□ 0.49
SCN8A-206ENST00000550891 MTA3Q9BTC8 594 aa18.1■□□□□ 0.49
SCN8A-206ENST00000550891 ATP8A2Q9NTI2 1148 aa18.1■□□□□ 0.49
SCN8A-206ENST00000550891 PARP3Q9Y6F1 533 aa18.1■□□□□ 0.49
SCN8A-206ENST00000550891 ANAPC4Q9UJX5 808 aa18.1■□□□□ 0.49
SCN8A-206ENST00000550891 CCDC196A0A1B0GTZ2 297 aa18.1■□□□□ 0.49
SCN8A-206ENST00000550891 USP17L12C9JPN9 530 aa18.1■□□□□ 0.49
SCN8A-206ENST00000550891 USP17L21D6R901 530 aa18.1■□□□□ 0.49
SCN8A-206ENST00000550891 PCP11498 1178 aaKnown RBP18.1■□□□□ 0.49
SCN8A-206ENST00000550891 HOXA10P31260 410 aaPredicted RBP18.1■□□□□ 0.49
SCN8A-206ENST00000550891 USP5P45974 858 aa18.1■□□□□ 0.49
SCN8A-206ENST00000550891 ZNF827Q17R98 1081 aa18.1■□□□□ 0.49
SCN8A-206ENST00000550891 MYL10Q9BUA6 226 aa18.1■□□□□ 0.49
SCN8A-206ENST00000550891 FDPSP14324 419 aaKnown RBP18.09■□□□□ 0.49
SCN8A-206ENST00000550891 ATL3Q6DD88 541 aa18.09■□□□□ 0.49
SCN8A-206ENST00000550891 COL23A1Q86Y22 540 aaPredicted RBP18.09■□□□□ 0.49
SCN8A-206ENST00000550891 TRIM22Q8IYM9 498 aa18.09■□□□□ 0.49
SCN8A-206ENST00000550891 NUP133Q8WUM0 1156 aa18.09■□□□□ 0.49
SCN8A-206ENST00000550891 EP400Q96L91 3159 aa18.09■□□□□ 0.49
SCN8A-206ENST00000550891 PPEF1O14829 653 aaPredicted RBP18.08■□□□□ 0.49
SCN8A-206ENST00000550891 TRIM44Q96DX7 344 aaPredicted RBP18.08■□□□□ 0.49
SCN8A-206ENST00000550891 ALG1Q9BT22 464 aa18.08■□□□□ 0.49
SCN8A-206ENST00000550891 CD209Q9NNX6 404 aa18.08■□□□□ 0.49
SCN8A-206ENST00000550891 RTN1Q16799 776 aa18.08■□□□□ 0.48
SCN8A-206ENST00000550891 C15orf52Q6ZUT6 534 aaKnown RBP18.08■□□□□ 0.48
SCN8A-206ENST00000550891 FBXO18Q8NFZ0 1043 aa18.08■□□□□ 0.48
SCN8A-206ENST00000550891 ZNF384Q8TF68 577 aa18.08■□□□□ 0.48
SCN8A-206ENST00000550891 SENP2Q9HC62 589 aa18.08■□□□□ 0.48
SCN8A-206ENST00000550891 ARPP21Q9UBL0 812 aaPredicted RBP18.08■□□□□ 0.48
SCN8A-206ENST00000550891 SSRP1Q08945 709 aaKnown RBP18.08■□□□□ 0.48
SCN8A-206ENST00000550891 WASF1Q92558 559 aa18.08■□□□□ 0.48
SCN8A-206ENST00000550891 PDE4BQ07343 736 aa18.07■□□□□ 0.48
SCN8A-206ENST00000550891 MCM9Q9NXL9 1143 aa18.07■□□□□ 0.48
SCN8A-206ENST00000550891 CYP2D7A0A087X1C5 515 aa18.07■□□□□ 0.48
SCN8A-206ENST00000550891 MMP10P09238 476 aa18.07■□□□□ 0.48
SCN8A-206ENST00000550891 PDE6BP35913 854 aa18.07■□□□□ 0.48
SCN8A-206ENST00000550891 OTUD7BQ6GQQ9 843 aa18.07■□□□□ 0.48
SCN8A-206ENST00000550891 CTR9Q6PD62 1173 aa18.07■□□□□ 0.48
SCN8A-206ENST00000550891 NKX2-3Q8TAU0 364 aa18.07■□□□□ 0.48
SCN8A-206ENST00000550891 PHKBQ93100 1093 aa18.07■□□□□ 0.48
SCN8A-206ENST00000550891 DCP1AQ9NPI6 582 aaPredicted RBP18.07■□□□□ 0.48
SCN8A-206ENST00000550891 MYH13Q9UKX3 1938 aa18.07■□□□□ 0.48
SCN8A-206ENST00000550891 TNKSO95271 1327 aa18.06■□□□□ 0.48
SCN8A-206ENST00000550891 G3V3G9 751 aa18.06■□□□□ 0.48
SCN8A-206ENST00000550891 PRDM1O75626 825 aa18.06■□□□□ 0.48
SCN8A-206ENST00000550891 SF3A1Q15459 793 aaKnown RBP18.06■□□□□ 0.48
SCN8A-206ENST00000550891 DCAF8Q5TAQ9 597 aa18.06■□□□□ 0.48
SCN8A-206ENST00000550891 AKT1S1Q96B36 256 aa18.06■□□□□ 0.48
SCN8A-206ENST00000550891 SLC26A6Q9BXS9 759 aa18.06■□□□□ 0.48
SCN8A-206ENST00000550891 RBSNQ9H1K0 784 aa18.06■□□□□ 0.48
SCN8A-206ENST00000550891 ZBTB22O15209 634 aa18.06■□□□□ 0.48
SCN8A-206ENST00000550891 SLC51AQ86UW1 340 aa18.06■□□□□ 0.48
SCN8A-206ENST00000550891 SLF2Q8IX21 1173 aa18.06■□□□□ 0.48
SCN8A-206ENST00000550891 RNF214Q8ND24 703 aa18.06■□□□□ 0.48
SCN8A-206ENST00000550891 CDC27P30260 824 aa18.06■□□□□ 0.48
SCN8A-206ENST00000550891 ALDH1B1P30837 517 aa18.06■□□□□ 0.48
SCN8A-206ENST00000550891 IFIT1BQ5T764 474 aaKnown RBP18.06■□□□□ 0.48
SCN8A-206ENST00000550891 BRAPQ7Z569 592 aa18.06■□□□□ 0.48
SCN8A-206ENST00000550891 TBC1D16Q8TBP0 767 aa18.06■□□□□ 0.48
SCN8A-206ENST00000550891 NUP62CLQ9H1M0 184 aa18.06■□□□□ 0.48
SCN8A-206ENST00000550891 CACNA1SQ13698 1873 aa18.05■□□□□ 0.48
SCN8A-206ENST00000550891 IRS2Q9Y4H2 1338 aa18.05■□□□□ 0.48
SCN8A-206ENST00000550891 NPR1P16066 1061 aa18.05■□□□□ 0.48
SCN8A-206ENST00000550891 AKAP17AQ02040 695 aaKnown RBP18.05■□□□□ 0.48
SCN8A-206ENST00000550891 SP8Q8IXZ3 490 aa18.05■□□□□ 0.48
SCN8A-206ENST00000550891 PODXL2Q9NZ53 605 aa18.05■□□□□ 0.48
SCN8A-206ENST00000550891 POLR3DP05423 398 aaPredicted RBP18.05■□□□□ 0.48
SCN8A-206ENST00000550891 CATIPQ7Z7H3 387 aa18.05■□□□□ 0.48
SCN8A-206ENST00000550891 CERS3Q8IU89 383 aa18.05■□□□□ 0.48
SCN8A-206ENST00000550891 ZNF654Q8IZM8 581 aa18.05■□□□□ 0.48
SCN8A-206ENST00000550891 TBC1D22AQ8WUA7 517 aa18.05■□□□□ 0.48
SCN8A-206ENST00000550891 FBXW7Q969H0 707 aa18.05■□□□□ 0.48
SCN8A-206ENST00000550891 TACC3Q9Y6A5 838 aa18.05■□□□□ 0.48
SCN8A-206ENST00000550891 ME1P48163 572 aa18.04■□□□□ 0.48
SCN8A-206ENST00000550891 ZSCAN10Q96SZ4 725 aaPredicted RBP18.04■□□□□ 0.48
SCN8A-206ENST00000550891 ZC3H12CQ9C0D7 883 aaKnown RBP18.04■□□□□ 0.48
SCN8A-206ENST00000550891 DIXDC1Q155Q3 683 aa18.04■□□□□ 0.48
SCN8A-206ENST00000550891 MFSD14BQ5SR56 506 aa18.04■□□□□ 0.48
SCN8A-206ENST00000550891 MSL1Q68DK7 614 aa18.04■□□□□ 0.48
SCN8A-206ENST00000550891 KLRG2A4D1S0 409 aaPredicted RBP18.04■□□□□ 0.48
SCN8A-206ENST00000550891 CCDC173Q0VFZ6 552 aa18.04■□□□□ 0.48
SCN8A-206ENST00000550891 SAFBQ15424 915 aaKnown RBP eCLIP18.04■□□□□ 0.48
SCN8A-206ENST00000550891 USP28Q96RU2 1077 aa18.04■□□□□ 0.48
SCN8A-206ENST00000550891 DDX19AQ9NUU7 478 aaKnown RBP18.04■□□□□ 0.48
SCN8A-206ENST00000550891 TIAM2Q8IVF5 1701 aa18.04■□□□□ 0.48
SCN8A-206ENST00000550891 TSPY2A6NKD2 308 aa18.03■□□□□ 0.48
SCN8A-206ENST00000550891 STK38Q15208 465 aa18.03■□□□□ 0.48
SCN8A-206ENST00000550891 CCDC82Q8N4S0 544 aa18.03■□□□□ 0.48
SCN8A-206ENST00000550891 POLLQ9UGP5 575 aa18.03■□□□□ 0.48
SCN8A-206ENST00000550891 ATP6V0A2Q9Y487 856 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms