RNA–Protein interactions for RNA: ENST00000550828.1

ERBB3-215, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 266 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-215ENST00000550828 DLK2Q6UY11 383 aa16.22■□□□□ 0.19
ERBB3-215ENST00000550828 CDAN1Q8IWY9 1227 aa16.22■□□□□ 0.19
ERBB3-215ENST00000550828 TGFBRAP1Q8WUH2 860 aa16.22■□□□□ 0.19
ERBB3-215ENST00000550828 IDI2Q9BXS1 227 aa16.22■□□□□ 0.19
ERBB3-215ENST00000550828 PGAP2Q9UHJ9 254 aa16.22■□□□□ 0.19
ERBB3-215ENST00000550828 PAPPA2Q9BXP8 1791 aa16.22■□□□□ 0.19
ERBB3-215ENST00000550828 FLT1P17948 1338 aa16.21■□□□□ 0.19
ERBB3-215ENST00000550828 TCP10L2B9ZVM9 353 aa16.21■□□□□ 0.19
ERBB3-215ENST00000550828 SMIM22K7EJ46 135 aa16.21■□□□□ 0.19
ERBB3-215ENST00000550828 PTH1RQ03431 593 aa16.21■□□□□ 0.19
ERBB3-215ENST00000550828 SH3BP5LQ7L8J4 393 aa16.21■□□□□ 0.19
ERBB3-215ENST00000550828 MAPKAPK5Q8IW41 473 aa16.21■□□□□ 0.19
ERBB3-215ENST00000550828 NOL10Q9BSC4 688 aaKnown RBP16.21■□□□□ 0.19
ERBB3-215ENST00000550828 VEZTQ9HBM0 779 aa16.21■□□□□ 0.19
ERBB3-215ENST00000550828 OTOFQ9HC10 1997 aa16.2■□□□□ 0.18
ERBB3-215ENST00000550828 PLCG2P16885 1265 aa16.2■□□□□ 0.18
ERBB3-215ENST00000550828 FKBP1CQ5VVH2 108 aa16.2■□□□□ 0.18
ERBB3-215ENST00000550828 CRNKL1Q9BZJ0 848 aaKnown RBP16.2■□□□□ 0.18
ERBB3-215ENST00000550828 LSG1Q9H089 658 aaKnown RBP16.2■□□□□ 0.18
ERBB3-215ENST00000550828 DCP1AQ9NPI6 582 aaPredicted RBP16.2■□□□□ 0.18
ERBB3-215ENST00000550828 SLC4A4Q9Y6R1 1079 aa16.2■□□□□ 0.18
ERBB3-215ENST00000550828 RPAP1Q9BWH6 1393 aaPredicted RBP16.2■□□□□ 0.18
ERBB3-215ENST00000550828 COL2A1P02458 1487 aaPredicted RBP16.2■□□□□ 0.18
ERBB3-215ENST00000550828 SSC5DA1L4H1 1573 aa16.2■□□□□ 0.18
ERBB3-215ENST00000550828 PITPNM2Q9BZ72 1349 aa16.19■□□□□ 0.18
ERBB3-215ENST00000550828 ADM5C9JUS6 153 aa16.19■□□□□ 0.18
ERBB3-215ENST00000550828 SEC24BO95487 1268 aa16.19■□□□□ 0.18
ERBB3-215ENST00000550828 SLURP2P0DP57 97 aa16.19■□□□□ 0.18
ERBB3-215ENST00000550828 HSPD1P10809 573 aaKnown RBP16.19■□□□□ 0.18
ERBB3-215ENST00000550828 TCP10Q12799 353 aa16.19■□□□□ 0.18
ERBB3-215ENST00000550828 PICALMQ13492 652 aa16.19■□□□□ 0.18
ERBB3-215ENST00000550828 CHADLQ6NUI6 762 aa16.19■□□□□ 0.18
ERBB3-215ENST00000550828 PNMA8AQ86V59 439 aaPredicted RBP16.19■□□□□ 0.18
ERBB3-215ENST00000550828 RUFY2Q8WXA3 655 aa16.19■□□□□ 0.18
ERBB3-215ENST00000550828 TMEM39BQ9GZU3 492 aa16.19■□□□□ 0.18
ERBB3-215ENST00000550828 PRDM10Q9NQV6 1147 aa16.19■□□□□ 0.18
ERBB3-215ENST00000550828 SAP30BPQ9UHR5 308 aaKnown RBP16.19■□□□□ 0.18
ERBB3-215ENST00000550828 ATAD5Q96QE3 1844 aa16.19■□□□□ 0.18
ERBB3-215ENST00000550828 ATRNL1Q5VV63 1379 aa16.18■□□□□ 0.18
ERBB3-215ENST00000550828 MYO1BO43795 1136 aa16.18■□□□□ 0.18
ERBB3-215ENST00000550828 NPM3O75607 178 aaKnown RBP16.18■□□□□ 0.18
ERBB3-215ENST00000550828 CYP2D6P10635 497 aa16.18■□□□□ 0.18
ERBB3-215ENST00000550828 RASA3Q14644 834 aa16.18■□□□□ 0.18
ERBB3-215ENST00000550828 MAP1SQ66K74 1059 aaPredicted RBP16.18■□□□□ 0.18
ERBB3-215ENST00000550828 LDHDQ86WU2 507 aa16.18■□□□□ 0.18
ERBB3-215ENST00000550828 CERS3Q8IU89 383 aa16.18■□□□□ 0.18
ERBB3-215ENST00000550828 ZC3H15Q8WU90 426 aaKnown RBP16.18■□□□□ 0.18
ERBB3-215ENST00000550828 TEPSINQ96N21 525 aa16.18■□□□□ 0.18
ERBB3-215ENST00000550828 OSBPL5Q9H0X9 879 aaPredicted RBP16.18■□□□□ 0.18
ERBB3-215ENST00000550828 CYP2D7A0A087X1C5 515 aa16.17■□□□□ 0.18
ERBB3-215ENST00000550828 DDTLA6NHG4 134 aaPredicted RBP16.17■□□□□ 0.18
ERBB3-215ENST00000550828 PATL2C9JE40 543 aaKnown RBP16.17■□□□□ 0.18
ERBB3-215ENST00000550828 USP5P45974 858 aa16.17■□□□□ 0.18
ERBB3-215ENST00000550828 FMR1Q06787 632 aaKnown RBP eCLIP16.17■□□□□ 0.18
ERBB3-215ENST00000550828 SLC4A8Q2Y0W8 1093 aa16.17■□□□□ 0.18
ERBB3-215ENST00000550828 PRAMEF18Q5VWM3 479 aa16.17■□□□□ 0.18
ERBB3-215ENST00000550828 FAM83AQ86UY5 434 aa16.17■□□□□ 0.18
ERBB3-215ENST00000550828 APOBEC3FQ8IUX4 373 aaKnown RBP16.17■□□□□ 0.18
ERBB3-215ENST00000550828 IFNL3Q8IZI9 196 aa16.17■□□□□ 0.18
ERBB3-215ENST00000550828 GLIS2Q9BZE0 524 aaPredicted RBP16.17■□□□□ 0.18
ERBB3-215ENST00000550828 TMOD2Q9NZR1 351 aa16.17■□□□□ 0.18
ERBB3-215ENST00000550828 ENTPD3O75355 529 aa16.16■□□□□ 0.18
ERBB3-215ENST00000550828 GNAT2P19087 354 aa16.16■□□□□ 0.18
ERBB3-215ENST00000550828 ALX1Q15699 326 aa16.16■□□□□ 0.18
ERBB3-215ENST00000550828 FAM151AQ8WW52 585 aa16.16■□□□□ 0.18
ERBB3-215ENST00000550828 DSCC1Q9BVC3 393 aa16.16■□□□□ 0.18
ERBB3-215ENST00000550828 NBPF3Q9H094 633 aa16.16■□□□□ 0.18
ERBB3-215ENST00000550828 DEFB129Q9H1M3 183 aa16.16■□□□□ 0.18
ERBB3-215ENST00000550828 ATP8A2Q9NTI2 1148 aa16.16■□□□□ 0.18
ERBB3-215ENST00000550828 PALD1Q9ULE6 856 aa16.16■□□□□ 0.18
ERBB3-215ENST00000550828 TACC3Q9Y6A5 838 aa16.16■□□□□ 0.18
ERBB3-215ENST00000550828 TRAF5O00463 557 aa16.15■□□□□ 0.18
ERBB3-215ENST00000550828 SLC34A2O95436 690 aa16.15■□□□□ 0.18
ERBB3-215ENST00000550828 FGAP02671 866 aa16.15■□□□□ 0.18
ERBB3-215ENST00000550828 CTR9Q6PD62 1173 aa16.15■□□□□ 0.18
ERBB3-215ENST00000550828 CASC1Q6TDU7 716 aa16.15■□□□□ 0.18
ERBB3-215ENST00000550828 KRT26Q7Z3Y9 468 aa16.15■□□□□ 0.18
ERBB3-215ENST00000550828 USP48Q86UV5 1035 aa16.15■□□□□ 0.18
ERBB3-215ENST00000550828 CLEC11AQ9Y240 323 aa16.15■□□□□ 0.18
ERBB3-215ENST00000550828 TAF6LQ9Y6J9 622 aa16.15■□□□□ 0.18
ERBB3-215ENST00000550828 GREB1LQ9C091 1923 aaPredicted RBP16.15■□□□□ 0.18
ERBB3-215ENST00000550828 ZMYM6O95789 1325 aa16.15■□□□□ 0.18
ERBB3-215ENST00000550828 USP17L12C9JPN9 530 aa16.14■□□□□ 0.17
ERBB3-215ENST00000550828 USP17L21D6R901 530 aa16.14■□□□□ 0.17
ERBB3-215ENST00000550828 FOXN1O15353 648 aa16.14■□□□□ 0.17
ERBB3-215ENST00000550828 APPP05067 770 aa16.14■□□□□ 0.17
ERBB3-215ENST00000550828 CTCFP49711 727 aaPredicted RBP16.14■□□□□ 0.17
ERBB3-215ENST00000550828 PLCD1P51178 756 aa16.14■□□□□ 0.17
ERBB3-215ENST00000550828 MFAP1P55081 439 aaKnown RBP16.14■□□□□ 0.17
ERBB3-215ENST00000550828 NBPF12Q5TAG4 269 aaPredicted RBP16.14■□□□□ 0.17
ERBB3-215ENST00000550828 GIMAP6Q6P9H5 292 aa16.14■□□□□ 0.17
ERBB3-215ENST00000550828 MAP4K1Q92918 833 aa16.14■□□□□ 0.17
ERBB3-215ENST00000550828 DCPSQ96C86 337 aaKnown RBP16.14■□□□□ 0.17
ERBB3-215ENST00000550828 ANO2Q9NQ90 1003 aa16.14■□□□□ 0.17
ERBB3-215ENST00000550828 MCM9Q9NXL9 1143 aa16.14■□□□□ 0.17
ERBB3-215ENST00000550828 TDO2P48775 406 aa16.13■□□□□ 0.17
ERBB3-215ENST00000550828 TNFAIP1Q13829 316 aa16.13■□□□□ 0.17
ERBB3-215ENST00000550828 SBK1Q52WX2 424 aa16.13■□□□□ 0.17
ERBB3-215ENST00000550828 C12orf60Q5U649 245 aa16.13■□□□□ 0.17
ERBB3-215ENST00000550828 SULF1Q8IWU6 871 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms