RNA–Protein interactions for RNA: ENST00000550325.5

VDR-208, Transcript of vitamin D receptor, humanhuman

TSL 1 (best) BASIC

Gene VDR, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-208ENST00000550325 SLF1Q9BQI6 1058 aa13.78□□□□□ -0.2
VDR-208ENST00000550325 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.78□□□□□ -0.2
VDR-208ENST00000550325 ADGRG1Q9Y653 693 aa13.78□□□□□ -0.2
VDR-208ENST00000550325 SLC39A14Q15043 492 aa13.78□□□□□ -0.2
VDR-208ENST00000550325 FAM212AQ96EL1 285 aa13.78□□□□□ -0.2
VDR-208ENST00000550325 ZNF274Q96GC6 653 aaPredicted RBP13.78□□□□□ -0.2
VDR-208ENST00000550325 EHD4Q9H223 541 aa13.78□□□□□ -0.2
VDR-208ENST00000550325 PAG1Q9NWQ8 432 aa13.78□□□□□ -0.2
VDR-208ENST00000550325 NUP88Q99567 741 aaPredicted RBP13.78□□□□□ -0.2
VDR-208ENST00000550325 POLD4Q9HCU8 107 aa13.78□□□□□ -0.2
VDR-208ENST00000550325 A0A087WUV0 522 aaPredicted RBP13.77□□□□□ -0.2
VDR-208ENST00000550325 CASP14P31944 242 aa13.77□□□□□ -0.2
VDR-208ENST00000550325 NEDD4P46934 1319 aa13.77□□□□□ -0.2
VDR-208ENST00000550325 EXOSC10Q01780 885 aaKnown RBP13.77□□□□□ -0.21
VDR-208ENST00000550325 PLEKHO1Q53GL0 409 aaPredicted RBP13.77□□□□□ -0.21
VDR-208ENST00000550325 TTC39AQ5SRH9 613 aa13.77□□□□□ -0.21
VDR-208ENST00000550325 KBTBD3Q8NAB2 608 aa13.77□□□□□ -0.21
VDR-208ENST00000550325 CXorf56Q9H5V9 222 aa13.77□□□□□ -0.21
VDR-208ENST00000550325 PXDNLA1KZ92 1463 aa13.77□□□□□ -0.21
VDR-208ENST00000550325 PIP4K2BP78356 416 aa13.77□□□□□ -0.21
VDR-208ENST00000550325 MRPS25P82663 173 aaKnown RBP13.77□□□□□ -0.21
VDR-208ENST00000550325 STIM1Q13586 685 aa13.77□□□□□ -0.21
VDR-208ENST00000550325 BCAS4Q8TDM0 211 aa13.77□□□□□ -0.21
VDR-208ENST00000550325 LRRC59Q96AG4 307 aaKnown RBP13.77□□□□□ -0.21
VDR-208ENST00000550325 SERTAD1Q9UHV2 236 aa13.77□□□□□ -0.21
VDR-208ENST00000550325 MAN1B1Q9UKM7 699 aa13.77□□□□□ -0.21
VDR-208ENST00000550325 XRN1Q8IZH2 1706 aaKnown RBP13.76□□□□□ -0.21
VDR-208ENST00000550325 SRGAP2O75044 1071 aa13.76□□□□□ -0.21
VDR-208ENST00000550325 SLC39A6Q13433 755 aa13.76□□□□□ -0.21
VDR-208ENST00000550325 NUTM2AQ8IVF1 878 aaPredicted RBP13.76□□□□□ -0.21
VDR-208ENST00000550325 FAM76AQ8TAV0 307 aa13.76□□□□□ -0.21
VDR-208ENST00000550325 MYL10Q9BUA6 226 aa13.76□□□□□ -0.21
VDR-208ENST00000550325 HDAC6Q9UBN7 1215 aa13.76□□□□□ -0.21
VDR-208ENST00000550325 DLC1Q96QB1 1528 aa13.76□□□□□ -0.21
VDR-208ENST00000550325 SHTN1A0MZ66 631 aa13.76□□□□□ -0.21
VDR-208ENST00000550325 FILIP1LQ4L180 1135 aa13.76□□□□□ -0.21
VDR-208ENST00000550325 SMYD4Q8IYR2 804 aaPredicted RBP13.76□□□□□ -0.21
VDR-208ENST00000550325 HNRNPLLQ8WVV9 542 aaKnown RBP13.76□□□□□ -0.21
VDR-208ENST00000550325 MED4Q9NPJ6 270 aa13.76□□□□□ -0.21
VDR-208ENST00000550325 TUBE1Q9UJT0 475 aa13.76□□□□□ -0.21
VDR-208ENST00000550325 KDRP35968 1356 aa13.76□□□□□ -0.21
VDR-208ENST00000550325 BMP6P22004 513 aa13.76□□□□□ -0.21
VDR-208ENST00000550325 MATR3P43243 847 aaKnown RBP eCLIP13.76□□□□□ -0.21
VDR-208ENST00000550325 EIF5P55010 431 aaKnown RBP13.76□□□□□ -0.21
VDR-208ENST00000550325 POSTNQ15063 836 aa13.76□□□□□ -0.21
VDR-208ENST00000550325 IMMTQ16891 758 aaKnown RBP13.76□□□□□ -0.21
VDR-208ENST00000550325 KRT40Q6A162 431 aa13.76□□□□□ -0.21
VDR-208ENST00000550325 FAM169AQ9Y6X4 670 aa13.76□□□□□ -0.21
VDR-208ENST00000550325 GOLGA6CA6NDK9 693 aa13.75□□□□□ -0.21
VDR-208ENST00000550325 IFIT1P09914 478 aaKnown RBP13.75□□□□□ -0.21
VDR-208ENST00000550325 GOLGA6DP0CG33 693 aa13.75□□□□□ -0.21
VDR-208ENST00000550325 CASP1P29466 404 aa13.75□□□□□ -0.21
VDR-208ENST00000550325 INPP5BP32019 993 aa13.75□□□□□ -0.21
VDR-208ENST00000550325 GGCXP38435 758 aa13.75□□□□□ -0.21
VDR-208ENST00000550325 JPH2Q9BR39 696 aaPredicted RBP13.75□□□□□ -0.21
VDR-208ENST00000550325 TEX13AQ9BXU3 409 aaPredicted RBP13.75□□□□□ -0.21
VDR-208ENST00000550325 GOLGA6AQ9NYA3 693 aa13.75□□□□□ -0.21
VDR-208ENST00000550325 DACH1Q9UI36 760 aa13.75□□□□□ -0.21
VDR-208ENST00000550325 CAPN7Q9Y6W3 813 aa13.75□□□□□ -0.21
VDR-208ENST00000550325 CT47A1Q5JQC4 288 aaPredicted RBP13.75□□□□□ -0.21
VDR-208ENST00000550325 SLC9C2Q5TAH2 1124 aa13.75□□□□□ -0.21
VDR-208ENST00000550325 MYO6Q9UM54 1294 aa13.75□□□□□ -0.21
VDR-208ENST00000550325 CDC25AP30304 524 aa13.75□□□□□ -0.21
VDR-208ENST00000550325 CPLX2Q6PUV4 134 aaKnown RBP13.75□□□□□ -0.21
VDR-208ENST00000550325 XAGE3Q8WTP9 111 aa13.75□□□□□ -0.21
VDR-208ENST00000550325 TRIM10Q9UDY6 481 aa13.75□□□□□ -0.21
VDR-208ENST00000550325 MLH3Q9UHC1 1453 aa13.74□□□□□ -0.21
VDR-208ENST00000550325 ZEB2O60315 1214 aa13.74□□□□□ -0.21
VDR-208ENST00000550325 COPS6Q7L5N1 327 aa13.74□□□□□ -0.21
VDR-208ENST00000550325 STAMQ92783 540 aa13.74□□□□□ -0.21
VDR-208ENST00000550325 HAUS7Q99871 368 aa13.74□□□□□ -0.21
VDR-208ENST00000550325 FAM107BQ9H098 131 aa13.74□□□□□ -0.21
VDR-208ENST00000550325 TFR2Q9UP52 801 aa13.74□□□□□ -0.21
VDR-208ENST00000550325 EXOC5O00471 708 aa13.74□□□□□ -0.21
VDR-208ENST00000550325 KIAA0754O94854 1291 aa13.74□□□□□ -0.21
VDR-208ENST00000550325 METAP2P50579 478 aaKnown RBP eCLIP13.74□□□□□ -0.21
VDR-208ENST00000550325 MAP9Q49MG5 647 aa13.74□□□□□ -0.21
VDR-208ENST00000550325 VPS16Q9H269 839 aa13.74□□□□□ -0.21
VDR-208ENST00000550325 KAT14Q9H8E8 782 aa13.74□□□□□ -0.21
VDR-208ENST00000550325 NRKQ7Z2Y5 1582 aa13.74□□□□□ -0.21
VDR-208ENST00000550325 SALL1Q9NSC2 1324 aa13.74□□□□□ -0.21
VDR-208ENST00000550325 UBE2Q2LH0YL09 131 aa13.74□□□□□ -0.21
VDR-208ENST00000550325 IGKV5-2P06315 115 aa13.74□□□□□ -0.21
VDR-208ENST00000550325 GNGT1P63211 74 aa13.74□□□□□ -0.21
VDR-208ENST00000550325 TBX2Q13207 712 aaPredicted RBP13.74□□□□□ -0.21
VDR-208ENST00000550325 RNF187Q5TA31 235 aaPredicted RBP13.74□□□□□ -0.21
VDR-208ENST00000550325 MSANTD4Q8NCY6 345 aa13.74□□□□□ -0.21
VDR-208ENST00000550325 GIMAP7Q8NHV1 300 aa13.74□□□□□ -0.21
VDR-208ENST00000550325 KAT2BQ92831 832 aa13.74□□□□□ -0.21
VDR-208ENST00000550325 CCDC85AQ96PX6 553 aaPredicted RBP13.74□□□□□ -0.21
VDR-208ENST00000550325 RAB21Q9UL25 225 aa13.74□□□□□ -0.21
VDR-208ENST00000550325 USP6P35125 1406 aa13.74□□□□□ -0.21
VDR-208ENST00000550325 RDXP35241 583 aaKnown RBP13.73□□□□□ -0.21
VDR-208ENST00000550325 ATP6V1AP38606 617 aa13.73□□□□□ -0.21
VDR-208ENST00000550325 RUFY1Q96T51 708 aa13.73□□□□□ -0.21
VDR-208ENST00000550325 OVOS2A0A0J9YW53 1432 aa13.73□□□□□ -0.21
VDR-208ENST00000550325 OVOS2Q6IE36 1432 aa13.73□□□□□ -0.21
VDR-208ENST00000550325 M0R2C6 588 aa13.73□□□□□ -0.21
VDR-208ENST00000550325 N4BP3O15049 544 aa13.73□□□□□ -0.21
VDR-208ENST00000550325 USP8P40818 1118 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms