RNA–Protein interactions for RNA: ENST00000550285.5

PDE1B-206, Transcript of phosphodiesterase 1B, humanhuman

TSL 2

Gene PDE1B, Length 2,209 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1B-206ENST00000550285 RHBDL3P58872 404 aa17.17■□□□□ 0.34
PDE1B-206ENST00000550285 STRIP1Q5VSL9 837 aa17.17■□□□□ 0.34
PDE1B-206ENST00000550285 STAG1Q8WVM7 1258 aa17.17■□□□□ 0.34
PDE1B-206ENST00000550285 TOMM22Q9NS69 142 aa17.17■□□□□ 0.34
PDE1B-206ENST00000550285 ATP8A2Q9NTI2 1148 aa17.17■□□□□ 0.34
PDE1B-206ENST00000550285 ZSWIM5Q9P217 1185 aa17.17■□□□□ 0.34
PDE1B-206ENST00000550285 USP17L3A6NCW0 530 aa17.17■□□□□ 0.34
PDE1B-206ENST00000550285 USP17L4A6NCW7 530 aa17.17■□□□□ 0.34
PDE1B-206ENST00000550285 IGSF3O75054 1194 aa17.17■□□□□ 0.34
PDE1B-206ENST00000550285 NFKBIBQ15653 356 aa17.17■□□□□ 0.34
PDE1B-206ENST00000550285 GIMAP6Q6P9H5 292 aa17.17■□□□□ 0.34
PDE1B-206ENST00000550285 USP17L1Q7RTZ2 530 aa17.17■□□□□ 0.34
PDE1B-206ENST00000550285 MAPKAPK5Q8IW41 473 aa17.17■□□□□ 0.34
PDE1B-206ENST00000550285 NOL10Q9BSC4 688 aaKnown RBP17.17■□□□□ 0.34
PDE1B-206ENST00000550285 CWC22Q9HCG8 908 aaKnown RBP17.17■□□□□ 0.34
PDE1B-206ENST00000550285 MCM9Q9NXL9 1143 aa17.17■□□□□ 0.34
PDE1B-206ENST00000550285 ANAPC4Q9UJX5 808 aa17.17■□□□□ 0.34
PDE1B-206ENST00000550285 BRPF3Q9ULD4 1205 aa17.17■□□□□ 0.34
PDE1B-206ENST00000550285 CIZ1Q9ULV3 898 aaPredicted RBP17.17■□□□□ 0.34
PDE1B-206ENST00000550285 CD2APQ9Y5K6 639 aa17.17■□□□□ 0.34
PDE1B-206ENST00000550285 PRDM1O75626 825 aa17.16■□□□□ 0.34
PDE1B-206ENST00000550285 RAB11FIP4Q86YS3 637 aa17.16■□□□□ 0.34
PDE1B-206ENST00000550285 ZKSCAN3Q9BRR0 538 aa17.16■□□□□ 0.34
PDE1B-206ENST00000550285 BCS1LQ9Y276 419 aa17.16■□□□□ 0.34
PDE1B-206ENST00000550285 ZDHHC9Q9Y397 364 aa17.16■□□□□ 0.34
PDE1B-206ENST00000550285 RAB3GAP1Q15042 981 aa17.16■□□□□ 0.34
PDE1B-206ENST00000550285 LARGE2Q8N3Y3 721 aa17.16■□□□□ 0.34
PDE1B-206ENST00000550285 SAP30BPQ9UHR5 308 aaKnown RBP17.16■□□□□ 0.34
PDE1B-206ENST00000550285 NAP1L2Q9ULW6 460 aaPredicted RBP17.16■□□□□ 0.34
PDE1B-206ENST00000550285 SUGT1Q9Y2Z0 365 aa17.16■□□□□ 0.34
PDE1B-206ENST00000550285 RAD17O75943 681 aa17.15■□□□□ 0.34
PDE1B-206ENST00000550285 SCRN1Q12765 414 aa17.15■□□□□ 0.34
PDE1B-206ENST00000550285 FOXD4L5Q5VV16 416 aaPredicted RBP17.15■□□□□ 0.34
PDE1B-206ENST00000550285 TEX11Q8IYF3 940 aa17.15■□□□□ 0.34
PDE1B-206ENST00000550285 FOXD4L4Q8WXT5 416 aaPredicted RBP17.15■□□□□ 0.34
PDE1B-206ENST00000550285 TNPO1Q92973 898 aaKnown RBP17.15■□□□□ 0.34
PDE1B-206ENST00000550285 CCT2P78371 535 aaKnown RBP17.15■□□□□ 0.34
PDE1B-206ENST00000550285 GRIPAP1Q4V328 841 aa17.15■□□□□ 0.34
PDE1B-206ENST00000550285 SLF2Q8IX21 1173 aa17.15■□□□□ 0.34
PDE1B-206ENST00000550285 GTF3C6Q969F1 213 aa17.15■□□□□ 0.34
PDE1B-206ENST00000550285 NCOA5Q9HCD5 579 aaKnown RBP17.15■□□□□ 0.34
PDE1B-206ENST00000550285 PDIA3P30101 505 aaKnown RBP17.14■□□□□ 0.33
PDE1B-206ENST00000550285 IGDCC4Q8TDY8 1250 aa17.14■□□□□ 0.33
PDE1B-206ENST00000550285 DYNLL2Q96FJ2 89 aa17.14■□□□□ 0.33
PDE1B-206ENST00000550285 LAMB1P07942 1786 aa17.14■□□□□ 0.33
PDE1B-206ENST00000550285 SH2B2O14492 632 aaPredicted RBP17.13■□□□□ 0.33
PDE1B-206ENST00000550285 PPFIA3O75145 1194 aa17.13■□□□□ 0.33
PDE1B-206ENST00000550285 GJB2P29033 226 aa17.13■□□□□ 0.33
PDE1B-206ENST00000550285 CRKP46108 304 aa17.13■□□□□ 0.33
PDE1B-206ENST00000550285 PLCD1P51178 756 aa17.13■□□□□ 0.33
PDE1B-206ENST00000550285 FBXL16Q8N461 479 aa17.13■□□□□ 0.33
PDE1B-206ENST00000550285 KRT23Q9C075 422 aa17.13■□□□□ 0.33
PDE1B-206ENST00000550285 SMC3Q9UQE7 1217 aa17.13■□□□□ 0.33
PDE1B-206ENST00000550285 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.13■□□□□ 0.33
PDE1B-206ENST00000550285 FER1L6Q2WGJ9 1857 aa17.13■□□□□ 0.33
PDE1B-206ENST00000550285 NAV1Q8NEY1 1877 aa17.13■□□□□ 0.33
PDE1B-206ENST00000550285 NFKBIEO00221 500 aa17.13■□□□□ 0.33
PDE1B-206ENST00000550285 JAK2O60674 1132 aa17.13■□□□□ 0.33
PDE1B-206ENST00000550285 SBK1Q52WX2 424 aa17.13■□□□□ 0.33
PDE1B-206ENST00000550285 APOBEC3HQ6NTF7 200 aaKnown RBP17.13■□□□□ 0.33
PDE1B-206ENST00000550285 CNNM2Q9H8M5 875 aa17.13■□□□□ 0.33
PDE1B-206ENST00000550285 ARPP21Q9UBL0 812 aaPredicted RBP17.13■□□□□ 0.33
PDE1B-206ENST00000550285 KLF18A0A0U1RQI7 1052 aa17.12■□□□□ 0.33
PDE1B-206ENST00000550285 PFKFB2O60825 505 aa17.12■□□□□ 0.33
PDE1B-206ENST00000550285 C12orf60Q5U649 245 aa17.12■□□□□ 0.33
PDE1B-206ENST00000550285 TEKT1Q969V4 418 aa17.12■□□□□ 0.33
PDE1B-206ENST00000550285 RNF41Q9H4P4 317 aaPredicted RBP17.12■□□□□ 0.33
PDE1B-206ENST00000550285 FLT1P17948 1338 aa17.12■□□□□ 0.33
PDE1B-206ENST00000550285 WDR19Q8NEZ3 1342 aa17.12■□□□□ 0.33
PDE1B-206ENST00000550285 PSMD14O00487 310 aa17.12■□□□□ 0.33
PDE1B-206ENST00000550285 IARSP41252 1262 aaKnown RBP17.12■□□□□ 0.33
PDE1B-206ENST00000550285 EVCP57679 992 aa17.12■□□□□ 0.33
PDE1B-206ENST00000550285 FKBP1AP62942 108 aaKnown RBP17.12■□□□□ 0.33
PDE1B-206ENST00000550285 PICALMQ13492 652 aa17.12■□□□□ 0.33
PDE1B-206ENST00000550285 SOGA3Q5TF21 947 aa17.12■□□□□ 0.33
PDE1B-206ENST00000550285 CDC42EP5Q6NZY7 148 aa17.12■□□□□ 0.33
PDE1B-206ENST00000550285 CHAMP1Q96JM3 812 aa17.12■□□□□ 0.33
PDE1B-206ENST00000550285 LY9Q9HBG7 655 aa17.12■□□□□ 0.33
PDE1B-206ENST00000550285 DDX4Q9NQI0 724 aaKnown RBP17.12■□□□□ 0.33
PDE1B-206ENST00000550285 USP40Q9NVE5 1235 aa17.12■□□□□ 0.33
PDE1B-206ENST00000550285 ANGEL1Q9UNK9 670 aaKnown RBP17.12■□□□□ 0.33
PDE1B-206ENST00000550285 HPS5Q9UPZ3 1129 aa17.12■□□□□ 0.33
PDE1B-206ENST00000550285 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.12■□□□□ 0.33
PDE1B-206ENST00000550285 IFIT3O14879 490 aaKnown RBP17.11■□□□□ 0.33
PDE1B-206ENST00000550285 CTDNEP1O95476 244 aa17.11■□□□□ 0.33
PDE1B-206ENST00000550285 FGRP09769 529 aa17.11■□□□□ 0.33
PDE1B-206ENST00000550285 RXRAP19793 462 aa17.11■□□□□ 0.33
PDE1B-206ENST00000550285 TMEM67Q5HYA8 995 aa17.11■□□□□ 0.33
PDE1B-206ENST00000550285 HHIPL2Q6UWX4 724 aa17.11■□□□□ 0.33
PDE1B-206ENST00000550285 SLC44A5Q8NCS7 719 aa17.11■□□□□ 0.33
PDE1B-206ENST00000550285 ZNF274Q96GC6 653 aaPredicted RBP17.11■□□□□ 0.33
PDE1B-206ENST00000550285 TAOK3Q9H2K8 898 aa17.11■□□□□ 0.33
PDE1B-206ENST00000550285 ZBTB12Q9Y330 459 aaPredicted RBP17.11■□□□□ 0.33
PDE1B-206ENST00000550285 RANBP6O60518 1105 aaKnown RBP17.11■□□□□ 0.33
PDE1B-206ENST00000550285 WDHD1O75717 1129 aaPredicted RBP17.11■□□□□ 0.33
PDE1B-206ENST00000550285 PLCG2P16885 1265 aa17.11■□□□□ 0.33
PDE1B-206ENST00000550285 CACNB3P54284 484 aa17.11■□□□□ 0.33
PDE1B-206ENST00000550285 SPON1Q9HCB6 807 aa17.11■□□□□ 0.33
PDE1B-206ENST00000550285 PSME4Q14997 1843 aa17.1■□□□□ 0.33
PDE1B-206ENST00000550285 PRELPP51888 382 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms