RNA–Protein interactions for RNA: ENST00000550075.5

CPSF6-205, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 540 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-205ENST00000550075 CSRNP1Q96S65 589 aa31.46■■■□□ 2.63
CPSF6-205ENST00000550075 ZNF341Q9BYN7 854 aa31.46■■■□□ 2.63
CPSF6-205ENST00000550075 MYH7P12883 1935 aa31.45■■■□□ 2.63
CPSF6-205ENST00000550075 SLC9C2Q5TAH2 1124 aa31.45■■■□□ 2.63
CPSF6-205ENST00000550075 REM2Q8IYK8 340 aaPredicted RBP31.45■■■□□ 2.63
CPSF6-205ENST00000550075 DDX4Q9NQI0 724 aaKnown RBP31.45■■■□□ 2.63
CPSF6-205ENST00000550075 WBP1LQ9NX94 342 aa31.45■■■□□ 2.63
CPSF6-205ENST00000550075 CSADQ9Y600 493 aa31.45■■■□□ 2.63
CPSF6-205ENST00000550075 PDE6AP16499 860 aa31.44■■■□□ 2.62
CPSF6-205ENST00000550075 EDC3Q96F86 508 aaKnown RBP31.44■■■□□ 2.62
CPSF6-205ENST00000550075 FOCADQ5VW36 1801 aa31.44■■■□□ 2.62
CPSF6-205ENST00000550075 ATRNL1Q5VV63 1379 aa31.43■■■□□ 2.62
CPSF6-205ENST00000550075 MX1P20591 662 aa31.43■■■□□ 2.62
CPSF6-205ENST00000550075 MAP3K9P80192 1104 aa31.43■■■□□ 2.62
CPSF6-205ENST00000550075 KIF23Q02241 960 aaPredicted RBP31.43■■■□□ 2.62
CPSF6-205ENST00000550075 SMC5Q8IY18 1101 aa31.43■■■□□ 2.62
CPSF6-205ENST00000550075 DDX55Q8NHQ9 600 aaKnown RBP eCLIP31.43■■■□□ 2.62
CPSF6-205ENST00000550075 CLMNQ96JQ2 1002 aa31.43■■■□□ 2.62
CPSF6-205ENST00000550075 WRNIP1Q96S55 665 aa31.43■■■□□ 2.62
CPSF6-205ENST00000550075 CDK5RAP2Q96SN8 1893 aa31.43■■■□□ 2.62
CPSF6-205ENST00000550075 PCNTO95613 3336 aa31.42■■■□□ 2.62
CPSF6-205ENST00000550075 ZSCAN25Q6NSZ9 544 aa31.42■■■□□ 2.62
CPSF6-205ENST00000550075 ZFPM1Q8IX07 1006 aa31.42■■■□□ 2.62
CPSF6-205ENST00000550075 MIGA1Q8NAN2 632 aa31.42■■■□□ 2.62
CPSF6-205ENST00000550075 OSBPL5Q9H0X9 879 aaPredicted RBP31.42■■■□□ 2.62
CPSF6-205ENST00000550075 ZBTB4Q9P1Z0 1013 aaPredicted RBP31.42■■■□□ 2.62
CPSF6-205ENST00000550075 GLRX3O76003 335 aaKnown RBP31.41■■■□□ 2.62
CPSF6-205ENST00000550075 ZBTB48P10074 688 aaPredicted RBP31.41■■■□□ 2.62
CPSF6-205ENST00000550075 CA12O43570 354 aa31.4■■■□□ 2.62
CPSF6-205ENST00000550075 SPRYD7Q5W111 196 aa31.4■■■□□ 2.62
CPSF6-205ENST00000550075 TSHZ3Q63HK5 1081 aa31.4■■■□□ 2.62
CPSF6-205ENST00000550075 MIGA2Q7L4E1 593 aa31.4■■■□□ 2.62
CPSF6-205ENST00000550075 ZNF532Q9HCE3 1301 aa31.4■■■□□ 2.62
CPSF6-205ENST00000550075 DYNLL1P63167 89 aaKnown RBP31.39■■■□□ 2.62
CPSF6-205ENST00000550075 VGLL4Q14135 290 aa31.39■■■□□ 2.62
CPSF6-205ENST00000550075 PPP1R3FQ6ZSY5 799 aaPredicted RBP31.39■■■□□ 2.62
CPSF6-205ENST00000550075 WNK4Q96J92 1243 aa31.39■■■□□ 2.62
CPSF6-205ENST00000550075 ZIC5Q96T25 663 aa31.39■■■□□ 2.62
CPSF6-205ENST00000550075 MAGEB6P1A0A0J9YX57 407 aa31.38■■■□□ 2.61
CPSF6-205ENST00000550075 DDTLA6NHG4 134 aaPredicted RBP31.38■■■□□ 2.61
CPSF6-205ENST00000550075 ADD2P35612 726 aa31.38■■■□□ 2.61
CPSF6-205ENST00000550075 SREBF2Q12772 1141 aa31.38■■■□□ 2.61
CPSF6-205ENST00000550075 SH3BP5LQ7L8J4 393 aa31.38■■■□□ 2.61
CPSF6-205ENST00000550075 OTUD7AQ8TE49 926 aaPredicted RBP31.38■■■□□ 2.61
CPSF6-205ENST00000550075 TGFBRAP1Q8WUH2 860 aa31.38■■■□□ 2.61
CPSF6-205ENST00000550075 DHX36Q9H2U1 1008 aaKnown RBP31.38■■■□□ 2.61
CPSF6-205ENST00000550075 ELP3Q9H9T3 547 aa31.38■■■□□ 2.61
CPSF6-205ENST00000550075 FLT1P17948 1338 aa31.38■■■□□ 2.61
CPSF6-205ENST00000550075 IGHDP01880 384 aa31.37■■■□□ 2.61
CPSF6-205ENST00000550075 LRRFIP1Q32MZ4 808 aaKnown RBP31.37■■■□□ 2.61
CPSF6-205ENST00000550075 MAPKAPK5Q8IW41 473 aa31.37■■■□□ 2.61
CPSF6-205ENST00000550075 SALL3Q9BXA9 1300 aa31.36■■■□□ 2.61
CPSF6-205ENST00000550075 TCRBV5S4A2TA0A5A2 114 aa31.36■■■□□ 2.61
CPSF6-205ENST00000550075 USP5P45974 858 aa31.36■■■□□ 2.61
CPSF6-205ENST00000550075 CTCFP49711 727 aaPredicted RBP31.36■■■□□ 2.61
CPSF6-205ENST00000550075 MKRN3Q13064 507 aaKnown RBP31.36■■■□□ 2.61
CPSF6-205ENST00000550075 KBTBD3Q8NAB2 608 aa31.36■■■□□ 2.61
CPSF6-205ENST00000550075 CRNKL1Q9BZJ0 848 aaKnown RBP31.36■■■□□ 2.61
CPSF6-205ENST00000550075 LAMB1P07942 1786 aa31.35■■■□□ 2.61
CPSF6-205ENST00000550075 FOXN1O15353 648 aa31.35■■■□□ 2.61
CPSF6-205ENST00000550075 UBE3CQ15386 1083 aa31.35■■■□□ 2.61
CPSF6-205ENST00000550075 B4GALNT3Q6L9W6 998 aa31.35■■■□□ 2.61
CPSF6-205ENST00000550075 PI4K2BQ8TCG2 481 aa31.35■■■□□ 2.61
CPSF6-205ENST00000550075 RIOK1Q9BRS2 568 aaKnown RBP31.35■■■□□ 2.61
CPSF6-205ENST00000550075 LNPKQ9C0E8 428 aa31.35■■■□□ 2.61
CPSF6-205ENST00000550075 ZNF112Q9UJU3 913 aa31.35■■■□□ 2.61
CPSF6-205ENST00000550075 MANSC4A6NHS7 340 aaPredicted RBP31.34■■■□□ 2.61
CPSF6-205ENST00000550075 OPTNQ96CV9 577 aa31.34■■■□□ 2.61
CPSF6-205ENST00000550075 CHD1LQ86WJ1 897 aa31.33■■■□□ 2.61
CPSF6-205ENST00000550075 ZKSCAN4Q969J2 545 aaPredicted RBP31.33■■■□□ 2.61
CPSF6-205ENST00000550075 STAP2Q9UGK3 403 aa31.33■■■□□ 2.61
CPSF6-205ENST00000550075 SNCAIPQ9Y6H5 919 aa31.33■■■□□ 2.61
CPSF6-205ENST00000550075 MYH1P12882 1939 aa31.32■■■□□ 2.6
CPSF6-205ENST00000550075 NAV1Q8NEY1 1877 aa31.32■■■□□ 2.6
CPSF6-205ENST00000550075 SPDYE5A6NIY4 337 aa31.32■■■□□ 2.6
CPSF6-205ENST00000550075 TBC1D12O60347 775 aa31.32■■■□□ 2.6
CPSF6-205ENST00000550075 HLA-DOAP06340 250 aa31.32■■■□□ 2.6
CPSF6-205ENST00000550075 MAP3K10Q02779 954 aa31.32■■■□□ 2.6
CPSF6-205ENST00000550075 NUCB1Q02818 461 aa31.32■■■□□ 2.6
CPSF6-205ENST00000550075 ERO1BQ86YB8 467 aa31.32■■■□□ 2.6
CPSF6-205ENST00000550075 PI4KBQ9UBF8 816 aa31.32■■■□□ 2.6
CPSF6-205ENST00000550075 HERC5Q9UII4 1024 aaKnown RBP31.32■■■□□ 2.6
CPSF6-205ENST00000550075 ZFYP08048 801 aaPredicted RBP31.31■■■□□ 2.6
CPSF6-205ENST00000550075 INPP5BP32019 993 aa31.31■■■□□ 2.6
CPSF6-205ENST00000550075 INHBEP58166 350 aa31.31■■■□□ 2.6
CPSF6-205ENST00000550075 NOL9Q5SY16 702 aaKnown RBP31.31■■■□□ 2.6
CPSF6-205ENST00000550075 TRIM34Q9BYJ4 488 aa31.31■■■□□ 2.6
CPSF6-205ENST00000550075 XPO5Q9HAV4 1204 aaKnown RBP eCLIP31.31■■■□□ 2.6
CPSF6-205ENST00000550075 SAGE1Q9NXZ1 904 aa31.31■■■□□ 2.6
CPSF6-205ENST00000550075 PDE1AP54750 535 aa31.3■■■□□ 2.6
CPSF6-205ENST00000550075 OTUD5Q96G74 571 aa31.3■■■□□ 2.6
CPSF6-205ENST00000550075 MBD4O95243 580 aa31.29■■■□□ 2.6
CPSF6-205ENST00000550075 DOCK1Q14185 1865 aa31.29■■■□□ 2.6
CPSF6-205ENST00000550075 TM4SF4P48230 202 aa31.28■■■□□ 2.6
CPSF6-205ENST00000550075 LCORLQ8N3X6 602 aa31.28■■■□□ 2.6
CPSF6-205ENST00000550075 CRACR2BQ8N4Y2 399 aaPredicted RBP31.28■■■□□ 2.6
CPSF6-205ENST00000550075 PICK1Q9NRD5 415 aa31.28■■■□□ 2.6
CPSF6-205ENST00000550075 SAP30BPQ9UHR5 308 aaKnown RBP31.28■■■□□ 2.6
CPSF6-205ENST00000550075 DDX60LQ5H9U9 1706 aaKnown RBP31.27■■■□□ 2.6
CPSF6-205ENST00000550075 SIPA1L1O43166 1804 aa31.27■■■□□ 2.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms