RNA–Protein interactions for RNA: ENST00000550016.5

DDX54-207, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-207ENST00000550016 MAP3K11Q16584 847 aa23.4■■□□□ 1.34
DDX54-207ENST00000550016 OSBPL3Q9H4L5 887 aa23.4■■□□□ 1.34
DDX54-207ENST00000550016 ECE1P42892 770 aa23.39■■□□□ 1.33
DDX54-207ENST00000550016 VEGFBP49765 207 aa23.39■■□□□ 1.33
DDX54-207ENST00000550016 LRRFIP1Q32MZ4 808 aaKnown RBP23.39■■□□□ 1.33
DDX54-207ENST00000550016 RGMBQ6NW40 437 aa23.39■■□□□ 1.33
DDX54-207ENST00000550016 PAXIP1Q6ZW49 1069 aaPredicted RBP23.39■■□□□ 1.33
DDX54-207ENST00000550016 ZSCAN29Q8IWY8 852 aaPredicted RBP23.39■■□□□ 1.33
DDX54-207ENST00000550016 TGFBRAP1Q8WUH2 860 aa23.39■■□□□ 1.33
DDX54-207ENST00000550016 RIOK1Q9BRS2 568 aaKnown RBP23.39■■□□□ 1.33
DDX54-207ENST00000550016 FZD1Q9UP38 647 aa23.39■■□□□ 1.33
DDX54-207ENST00000550016 OTOFQ9HC10 1997 aa23.39■■□□□ 1.33
DDX54-207ENST00000550016 ZFYP08048 801 aaPredicted RBP23.38■■□□□ 1.33
DDX54-207ENST00000550016 IREB2P48200 963 aaKnown RBP23.38■■□□□ 1.33
DDX54-207ENST00000550016 SLFNL1Q499Z3 407 aa23.38■■□□□ 1.33
DDX54-207ENST00000550016 LDLRAD1Q5T700 205 aa23.38■■□□□ 1.33
DDX54-207ENST00000550016 DCAF15Q66K64 600 aa23.38■■□□□ 1.33
DDX54-207ENST00000550016 CYP4F22Q6NT55 531 aa23.38■■□□□ 1.33
DDX54-207ENST00000550016 SH3BP5LQ7L8J4 393 aa23.38■■□□□ 1.33
DDX54-207ENST00000550016 CAPNS2Q96L46 248 aa23.38■■□□□ 1.33
DDX54-207ENST00000550016 CEP350Q5VT06 3117 aa23.37■■□□□ 1.33
DDX54-207ENST00000550016 COL2A1P02458 1487 aaPredicted RBP23.37■■□□□ 1.33
DDX54-207ENST00000550016 UNCXA6NJT0 531 aa23.37■■□□□ 1.33
DDX54-207ENST00000550016 RNF113AO15541 343 aaKnown RBP23.37■■□□□ 1.33
DDX54-207ENST00000550016 ZNF157P51786 506 aaPredicted RBP23.37■■□□□ 1.33
DDX54-207ENST00000550016 CENPQQ7L2Z9 268 aaPredicted RBP23.37■■□□□ 1.33
DDX54-207ENST00000550016 OSBPL5Q9H0X9 879 aaPredicted RBP23.37■■□□□ 1.33
DDX54-207ENST00000550016 WDR33Q9C0J8 1336 aaKnown RBP23.36■■□□□ 1.33
DDX54-207ENST00000550016 DDTLA6NHG4 134 aaPredicted RBP23.36■■□□□ 1.33
DDX54-207ENST00000550016 CHGBP05060 677 aa23.36■■□□□ 1.33
DDX54-207ENST00000550016 PDE4AP27815 886 aa23.36■■□□□ 1.33
DDX54-207ENST00000550016 MAPKAPK5Q8IW41 473 aa23.36■■□□□ 1.33
DDX54-207ENST00000550016 CCDC102AQ96A19 550 aa23.36■■□□□ 1.33
DDX54-207ENST00000550016 EVI5LQ96CN4 794 aa23.36■■□□□ 1.33
DDX54-207ENST00000550016 CSRNP1Q96S65 589 aa23.36■■□□□ 1.33
DDX54-207ENST00000550016 FSD1Q9BTV5 496 aa23.36■■□□□ 1.33
DDX54-207ENST00000550016 ATRNL1Q5VV63 1379 aa23.36■■□□□ 1.33
DDX54-207ENST00000550016 USP5P45974 858 aa23.35■■□□□ 1.33
DDX54-207ENST00000550016 CCDC136Q96JN2 1154 aa23.35■■□□□ 1.33
DDX54-207ENST00000550016 CRNKL1Q9BZJ0 848 aaKnown RBP23.35■■□□□ 1.33
DDX54-207ENST00000550016 FLT1P17948 1338 aa23.34■■□□□ 1.33
DDX54-207ENST00000550016 NAV1Q8NEY1 1877 aa23.34■■□□□ 1.33
DDX54-207ENST00000550016 BAZ2AQ9UIF9 1905 aaKnown RBP23.34■■□□□ 1.33
DDX54-207ENST00000550016 GRM1Q13255 1194 aa23.34■■□□□ 1.33
DDX54-207ENST00000550016 ERICH6BQ5W0A0 696 aa23.34■■□□□ 1.33
DDX54-207ENST00000550016 MIGA2Q7L4E1 593 aa23.34■■□□□ 1.33
DDX54-207ENST00000550016 ANKRD13AQ8IZ07 590 aa23.34■■□□□ 1.33
DDX54-207ENST00000550016 LCORLQ8N3X6 602 aa23.34■■□□□ 1.33
DDX54-207ENST00000550016 ZNF341Q9BYN7 854 aa23.34■■□□□ 1.33
DDX54-207ENST00000550016 DHX36Q9H2U1 1008 aaKnown RBP23.34■■□□□ 1.33
DDX54-207ENST00000550016 MBD4O95243 580 aa23.33■■□□□ 1.33
DDX54-207ENST00000550016 MAP3K9P80192 1104 aa23.33■■□□□ 1.33
DDX54-207ENST00000550016 APPBP2Q92624 585 aa23.33■■□□□ 1.33
DDX54-207ENST00000550016 SLC10A4Q96EP9 437 aa23.33■■□□□ 1.33
DDX54-207ENST00000550016 PUS7LQ9H0K6 701 aaKnown RBP23.33■■□□□ 1.33
DDX54-207ENST00000550016 ARMT1Q9H993 441 aa23.33■■□□□ 1.33
DDX54-207ENST00000550016 SIPA1L1O43166 1804 aa23.32■■□□□ 1.32
DDX54-207ENST00000550016 FAM155AB1AL88 458 aaPredicted RBP23.32■■□□□ 1.32
DDX54-207ENST00000550016 TRIM6-TRIM34B2RNG4 842 aa23.32■■□□□ 1.32
DDX54-207ENST00000550016 MAP3K10Q02779 954 aa23.32■■□□□ 1.32
DDX54-207ENST00000550016 TICAM2Q86XR7 235 aa23.32■■□□□ 1.32
DDX54-207ENST00000550016 JMYQ8N9B5 988 aa23.32■■□□□ 1.32
DDX54-207ENST00000550016 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.32■■□□□ 1.32
DDX54-207ENST00000550016 AIDAQ96BJ3 306 aa23.32■■□□□ 1.32
DDX54-207ENST00000550016 SLC10A3P09131 477 aa23.31■■□□□ 1.32
DDX54-207ENST00000550016 RASAL3Q86YV0 1011 aa23.31■■□□□ 1.32
DDX54-207ENST00000550016 OSBP2Q969R2 916 aa23.31■■□□□ 1.32
DDX54-207ENST00000550016 CLMNQ96JQ2 1002 aa23.31■■□□□ 1.32
DDX54-207ENST00000550016 PI4KBQ9UBF8 816 aa23.31■■□□□ 1.32
DDX54-207ENST00000550016 SAP30BPQ9UHR5 308 aaKnown RBP23.31■■□□□ 1.32
DDX54-207ENST00000550016 ZNF112Q9UJU3 913 aa23.31■■□□□ 1.32
DDX54-207ENST00000550016 THSD7BQ9C0I4 1608 aa23.3■■□□□ 1.32
DDX54-207ENST00000550016 TBC1D12O60347 775 aa23.3■■□□□ 1.32
DDX54-207ENST00000550016 MAP2K2P36507 400 aa23.3■■□□□ 1.32
DDX54-207ENST00000550016 NOGQ13253 232 aa23.3■■□□□ 1.32
DDX54-207ENST00000550016 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.3■■□□□ 1.32
DDX54-207ENST00000550016 RILPL2Q969X0 211 aa23.3■■□□□ 1.32
DDX54-207ENST00000550016 WRNIP1Q96S55 665 aa23.3■■□□□ 1.32
DDX54-207ENST00000550016 PALD1Q9ULE6 856 aa23.3■■□□□ 1.32
DDX54-207ENST00000550016 DDX60LQ5H9U9 1706 aaKnown RBP23.3■■□□□ 1.32
DDX54-207ENST00000550016 AOC2O75106 756 aa23.29■■□□□ 1.32
DDX54-207ENST00000550016 ZMYM1Q5SVZ6 1142 aa23.29■■□□□ 1.32
DDX54-207ENST00000550016 STRBPQ96SI9 672 aaKnown RBP23.29■■□□□ 1.32
DDX54-207ENST00000550016 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.29■■□□□ 1.32
DDX54-207ENST00000550016 CSADQ9Y600 493 aa23.29■■□□□ 1.32
DDX54-207ENST00000550016 VGLL4Q14135 290 aa23.28■■□□□ 1.32
DDX54-207ENST00000550016 FOXP4Q8IVH2 680 aaPredicted RBP23.28■■□□□ 1.32
DDX54-207ENST00000550016 SDR42E1Q8WUS8 393 aa23.28■■□□□ 1.32
DDX54-207ENST00000550016 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.28■■□□□ 1.32
DDX54-207ENST00000550016 ATP8A2Q9NTI2 1148 aa23.28■■□□□ 1.32
DDX54-207ENST00000550016 ATAD5Q96QE3 1844 aa23.28■■□□□ 1.32
DDX54-207ENST00000550016 LAMB1P07942 1786 aa23.27■■□□□ 1.32
DDX54-207ENST00000550016 PHF20L1A8MW92 1017 aa23.27■■□□□ 1.32
DDX54-207ENST00000550016 PRKAB2O43741 272 aa23.27■■□□□ 1.32
DDX54-207ENST00000550016 HLA-DOAP06340 250 aa23.27■■□□□ 1.32
DDX54-207ENST00000550016 TTC22Q5TAA0 569 aa23.27■■□□□ 1.32
DDX54-207ENST00000550016 ZKSCAN4Q969J2 545 aaPredicted RBP23.27■■□□□ 1.32
DDX54-207ENST00000550016 DCP1AQ9NPI6 582 aaPredicted RBP23.27■■□□□ 1.32
DDX54-207ENST00000550016 HERC5Q9UII4 1024 aaKnown RBP23.27■■□□□ 1.32
DDX54-207ENST00000550016 SLC4A4Q9Y6R1 1079 aa23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms