RNA–Protein interactions for RNA: ENST00000550009.1

COX6A1-203, Transcript of cytochrome c oxidase subunit 6A1, humanhuman

TSL 2

Gene COX6A1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX6A1-203ENST00000550009 PDS5AQ29RF7 1337 aaKnown RBP19.64■□□□□ 0.73
COX6A1-203ENST00000550009 CEP85Q6P2H3 762 aa19.63■□□□□ 0.73
COX6A1-203ENST00000550009 OTOP1Q7RTM1 612 aa19.63■□□□□ 0.73
COX6A1-203ENST00000550009 CCDC84Q86UT8 332 aaPredicted RBP19.63■□□□□ 0.73
COX6A1-203ENST00000550009 ERO1BQ86YB8 467 aa19.63■□□□□ 0.73
COX6A1-203ENST00000550009 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.63■□□□□ 0.73
COX6A1-203ENST00000550009 CCDC8Q9H0W5 538 aaPredicted RBP19.63■□□□□ 0.73
COX6A1-203ENST00000550009 TRIM17Q9Y577 477 aa19.63■□□□□ 0.73
COX6A1-203ENST00000550009 MGAMO43451 1857 aa19.62■□□□□ 0.73
COX6A1-203ENST00000550009 PHF20L1A8MW92 1017 aa19.62■□□□□ 0.73
COX6A1-203ENST00000550009 GTF2A2P52657 109 aa19.62■□□□□ 0.73
COX6A1-203ENST00000550009 OS9Q13438 667 aaPredicted RBP19.62■□□□□ 0.73
COX6A1-203ENST00000550009 DCAF15Q66K64 600 aa19.62■□□□□ 0.73
COX6A1-203ENST00000550009 ZGPATQ8N5A5 531 aaKnown RBP19.62■□□□□ 0.73
COX6A1-203ENST00000550009 FAM163AQ96GL9 167 aaPredicted RBP19.62■□□□□ 0.73
COX6A1-203ENST00000550009 IDI2Q9BXS1 227 aa19.62■□□□□ 0.73
COX6A1-203ENST00000550009 DBNLQ9UJU6 430 aaKnown RBP19.62■□□□□ 0.73
COX6A1-203ENST00000550009 EXOC6BQ9Y2D4 811 aa19.62■□□□□ 0.73
COX6A1-203ENST00000550009 MYH1P12882 1939 aa19.61■□□□□ 0.73
COX6A1-203ENST00000550009 GPR75-ASB3A0A0A6YYF3 556 aa19.61■□□□□ 0.73
COX6A1-203ENST00000550009 MLLT1Q03111 559 aaPredicted RBP19.61■□□□□ 0.73
COX6A1-203ENST00000550009 MOGSQ13724 837 aa19.61■□□□□ 0.73
COX6A1-203ENST00000550009 TAF1CQ15572 869 aaPredicted RBP19.61■□□□□ 0.73
COX6A1-203ENST00000550009 ADGRA1Q86SQ6 560 aa19.61■□□□□ 0.73
COX6A1-203ENST00000550009 EAF2Q96CJ1 260 aaPredicted RBP19.61■□□□□ 0.73
COX6A1-203ENST00000550009 ARHGAP39Q9C0H5 1083 aa19.61■□□□□ 0.73
COX6A1-203ENST00000550009 RAI14Q9P0K7 980 aa19.61■□□□□ 0.73
COX6A1-203ENST00000550009 NOP58Q9Y2X3 529 aaKnown RBP19.61■□□□□ 0.73
COX6A1-203ENST00000550009 DOCK3Q8IZD9 2030 aa19.61■□□□□ 0.73
COX6A1-203ENST00000550009 CYP2E1P05181 493 aaPredicted RBP19.6■□□□□ 0.73
COX6A1-203ENST00000550009 PPIL2Q13356 520 aa19.6■□□□□ 0.73
COX6A1-203ENST00000550009 FBXO46Q6PJ61 603 aaPredicted RBP19.6■□□□□ 0.73
COX6A1-203ENST00000550009 PIH1D3Q9NQM4 214 aaKnown RBP19.6■□□□□ 0.73
COX6A1-203ENST00000550009 KIAA0100Q14667 2235 aaKnown RBP19.59■□□□□ 0.73
COX6A1-203ENST00000550009 ZAP70P43403 619 aa19.59■□□□□ 0.73
COX6A1-203ENST00000550009 RRP1BQ14684 758 aaKnown RBP19.59■□□□□ 0.73
COX6A1-203ENST00000550009 TTC39AQ5SRH9 613 aa19.59■□□□□ 0.73
COX6A1-203ENST00000550009 C20orf194Q5TEA3 1177 aa19.59■□□□□ 0.73
COX6A1-203ENST00000550009 SPTY2D1Q68D10 685 aaPredicted RBP19.59■□□□□ 0.73
COX6A1-203ENST00000550009 ZSCAN29Q8IWY8 852 aaPredicted RBP19.59■□□□□ 0.73
COX6A1-203ENST00000550009 SH3RF3Q8TEJ3 882 aaPredicted RBP19.59■□□□□ 0.73
COX6A1-203ENST00000550009 COG6Q9Y2V7 657 aa19.59■□□□□ 0.73
COX6A1-203ENST00000550009 ENTPD3O75355 529 aa19.58■□□□□ 0.72
COX6A1-203ENST00000550009 SP3Q02447 781 aa19.58■□□□□ 0.72
COX6A1-203ENST00000550009 OTUD7BQ6GQQ9 843 aa19.58■□□□□ 0.72
COX6A1-203ENST00000550009 SIRT2Q8IXJ6 389 aa19.58■□□□□ 0.72
COX6A1-203ENST00000550009 GPR108Q9NPR9 543 aa19.58■□□□□ 0.72
COX6A1-203ENST00000550009 PDE4DIPQ5VU43 2346 aa19.58■□□□□ 0.72
COX6A1-203ENST00000550009 CETPP11597 493 aa19.57■□□□□ 0.72
COX6A1-203ENST00000550009 CTGFP29279 349 aa19.57■□□□□ 0.72
COX6A1-203ENST00000550009 PPATQ06203 517 aa19.57■□□□□ 0.72
COX6A1-203ENST00000550009 SNAPC2Q13487 334 aa19.57■□□□□ 0.72
COX6A1-203ENST00000550009 PKN2Q16513 984 aaKnown RBP19.57■□□□□ 0.72
COX6A1-203ENST00000550009 NOL9Q5SY16 702 aaKnown RBP19.57■□□□□ 0.72
COX6A1-203ENST00000550009 LRP2BPQ9P2M1 347 aa19.57■□□□□ 0.72
COX6A1-203ENST00000550009 APBB1O00213 710 aa19.56■□□□□ 0.72
COX6A1-203ENST00000550009 UQCRFS1P1P0C7P4 283 aa19.56■□□□□ 0.72
COX6A1-203ENST00000550009 SHROOM1Q2M3G4 852 aaPredicted RBP19.56■□□□□ 0.72
COX6A1-203ENST00000550009 HOOK2Q96ED9 719 aa19.56■□□□□ 0.72
COX6A1-203ENST00000550009 BCL11AQ9H165 835 aa19.56■□□□□ 0.72
COX6A1-203ENST00000550009 ANTXR1Q9H6X2 564 aa19.56■□□□□ 0.72
COX6A1-203ENST00000550009 IL1RAPL2Q9NP60 686 aa19.56■□□□□ 0.72
COX6A1-203ENST00000550009 AATFQ9NY61 560 aaKnown RBP eCLIP19.56■□□□□ 0.72
COX6A1-203ENST00000550009 KCNH4Q9UQ05 1017 aa19.56■□□□□ 0.72
COX6A1-203ENST00000550009 PTPN22Q9Y2R2 807 aa19.56■□□□□ 0.72
COX6A1-203ENST00000550009 RBBP6Q7Z6E9 1792 aaKnown RBP19.55■□□□□ 0.72
COX6A1-203ENST00000550009 MAP3K10Q02779 954 aa19.55■□□□□ 0.72
COX6A1-203ENST00000550009 GPAT2Q6NUI2 795 aa19.55■□□□□ 0.72
COX6A1-203ENST00000550009 ERO1AQ96HE7 468 aa19.55■□□□□ 0.72
COX6A1-203ENST00000550009 ZFYVE28Q9HCC9 887 aa19.55■□□□□ 0.72
COX6A1-203ENST00000550009 CPA4Q9UI42 421 aa19.55■□□□□ 0.72
COX6A1-203ENST00000550009 POTEFA5A3E0 1075 aa19.54■□□□□ 0.72
COX6A1-203ENST00000550009 PTPRAP18433 802 aa19.54■□□□□ 0.72
COX6A1-203ENST00000550009 DYNLL1P63167 89 aaKnown RBP19.54■□□□□ 0.72
COX6A1-203ENST00000550009 SLC4A8Q2Y0W8 1093 aa19.54■□□□□ 0.72
COX6A1-203ENST00000550009 SLF2Q8IX21 1173 aa19.54■□□□□ 0.72
COX6A1-203ENST00000550009 OSBPL5Q9H0X9 879 aaPredicted RBP19.54■□□□□ 0.72
COX6A1-203ENST00000550009 EFCC1Q9HA90 598 aa19.54■□□□□ 0.72
COX6A1-203ENST00000550009 ZHX2Q9Y6X8 837 aa19.54■□□□□ 0.72
COX6A1-203ENST00000550009 ADGRA2Q96PE1 1338 aa19.53■□□□□ 0.72
COX6A1-203ENST00000550009 PDHXO00330 501 aa19.53■□□□□ 0.72
COX6A1-203ENST00000550009 TLR2O60603 784 aa19.53■□□□□ 0.72
COX6A1-203ENST00000550009 JAG1P78504 1218 aa19.53■□□□□ 0.72
COX6A1-203ENST00000550009 CCDC158Q5M9N0 1113 aa19.53■□□□□ 0.72
COX6A1-203ENST00000550009 NAA16Q6N069 864 aaPredicted RBP19.53■□□□□ 0.72
COX6A1-203ENST00000550009 TEX11Q8IYF3 940 aa19.53■□□□□ 0.72
COX6A1-203ENST00000550009 SCYL3Q8IZE3 742 aa19.53■□□□□ 0.72
COX6A1-203ENST00000550009 RCAN3Q9UKA8 241 aa19.53■□□□□ 0.72
COX6A1-203ENST00000550009 LOC285556D6RIA3 1793 aa19.52■□□□□ 0.72
COX6A1-203ENST00000550009 CYP2C8P10632 490 aa19.52■□□□□ 0.72
COX6A1-203ENST00000550009 AACSQ86V21 672 aa19.52■□□□□ 0.72
COX6A1-203ENST00000550009 ZBTB40Q9NUA8 1239 aa19.52■□□□□ 0.72
COX6A1-203ENST00000550009 AFG3L2Q9Y4W6 797 aa19.52■□□□□ 0.72
COX6A1-203ENST00000550009 PTCH2Q9Y6C5 1203 aa19.52■□□□□ 0.72
COX6A1-203ENST00000550009 MYH7P12883 1935 aa19.51■□□□□ 0.71
COX6A1-203ENST00000550009 LDHCP07864 332 aa19.51■□□□□ 0.71
COX6A1-203ENST00000550009 GSTO1P78417 241 aa19.51■□□□□ 0.71
COX6A1-203ENST00000550009 C17orf99Q6UX52 265 aa19.51■□□□□ 0.71
COX6A1-203ENST00000550009 MAPKAPK5Q8IW41 473 aa19.51■□□□□ 0.71
COX6A1-203ENST00000550009 TGFBRAP1Q8WUH2 860 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms