RNA–Protein interactions for RNA: ENST00000549833.1

UBE2N-204, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

TSL 3 BASIC

Gene UBE2N, Length 960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-204ENST00000549833 C1orf127Q8N9H9 656 aa8.93□□□□□ -0.98
UBE2N-204ENST00000549833 DMRTB1Q96MA1 342 aa8.93□□□□□ -0.98
UBE2N-204ENST00000549833 ORAI2Q96SN7 254 aa8.93□□□□□ -0.98
UBE2N-204ENST00000549833 CNTN3Q9P232 1028 aa8.93□□□□□ -0.98
UBE2N-204ENST00000549833 FOXD3Q9UJU5 478 aaPredicted RBP8.93□□□□□ -0.98
UBE2N-204ENST00000549833 EVC2Q86UK5 1308 aa8.93□□□□□ -0.98
UBE2N-204ENST00000549833 DISP3Q9P2K9 1392 aa8.93□□□□□ -0.98
UBE2N-204ENST00000549833 ANKARQ7Z5J8 1434 aa8.93□□□□□ -0.98
UBE2N-204ENST00000549833 MON2Q7Z3U7 1717 aa8.93□□□□□ -0.98
UBE2N-204ENST00000549833 TRPM3Q9HCF6 1732 aaPredicted RBP8.93□□□□□ -0.98
UBE2N-204ENST00000549833 COL16A1Q07092 1604 aaPredicted RBP8.92□□□□□ -0.98
UBE2N-204ENST00000549833 AHDC1Q5TGY3 1603 aaPredicted RBP8.92□□□□□ -0.98
UBE2N-204ENST00000549833 J3QW42 95 aa8.92□□□□□ -0.98
UBE2N-204ENST00000549833 LINC00114Q6XXX2 140 aa8.92□□□□□ -0.98
UBE2N-204ENST00000549833 BRINP3Q76B58 766 aa8.92□□□□□ -0.98
UBE2N-204ENST00000549833 RGS22Q8NE09 1264 aa8.92□□□□□ -0.98
UBE2N-204ENST00000549833 FBXO41Q8TF61 875 aa8.92□□□□□ -0.98
UBE2N-204ENST00000549833 PLD4Q96BZ4 506 aa8.92□□□□□ -0.98
UBE2N-204ENST00000549833 SMG9Q9H0W8 520 aaKnown RBP8.92□□□□□ -0.98
UBE2N-204ENST00000549833 SPDYE3A6NKU9 549 aa8.91□□□□□ -0.98
UBE2N-204ENST00000549833 IRS1P35568 1242 aa8.91□□□□□ -0.98
UBE2N-204ENST00000549833 COL13A1Q5TAT6 717 aaPredicted RBP8.91□□□□□ -0.98
UBE2N-204ENST00000549833 C8orf86Q6ZUL3 223 aa8.91□□□□□ -0.98
UBE2N-204ENST00000549833 SND1Q7KZF4 910 aaKnown RBP eCLIP8.91□□□□□ -0.98
UBE2N-204ENST00000549833 TTC9Q92623 222 aa8.91□□□□□ -0.98
UBE2N-204ENST00000549833 DDX17Q92841 729 aaKnown RBP8.91□□□□□ -0.98
UBE2N-204ENST00000549833 CHRDQ9H2X0 955 aa8.91□□□□□ -0.98
UBE2N-204ENST00000549833 GPR182O15218 404 aa8.9□□□□□ -0.98
UBE2N-204ENST00000549833 PMFBP1Q8TBY8 1022 aa8.9□□□□□ -0.98
UBE2N-204ENST00000549833 ALS2Q96Q42 1657 aa8.9□□□□□ -0.98
UBE2N-204ENST00000549833 PPIP5K1Q6PFW1 1433 aa8.89□□□□□ -0.99
UBE2N-204ENST00000549833 KIF20BQ96Q89 1820 aa8.89□□□□□ -0.99
UBE2N-204ENST00000549833 SMNDC1O75940 238 aaKnown RBP eCLIP8.89□□□□□ -0.99
UBE2N-204ENST00000549833 NID1P14543 1247 aa8.89□□□□□ -0.99
UBE2N-204ENST00000549833 AFF1P51825 1210 aaKnown RBP8.89□□□□□ -0.99
UBE2N-204ENST00000549833 TMF1P82094 1093 aa8.89□□□□□ -0.99
UBE2N-204ENST00000549833 KCNMA1Q12791 1236 aa8.89□□□□□ -0.99
UBE2N-204ENST00000549833 ZSCAN29Q8IWY8 852 aaPredicted RBP8.89□□□□□ -0.99
UBE2N-204ENST00000549833 ALKBH8Q96BT7 664 aaKnown RBP8.89□□□□□ -0.99
UBE2N-204ENST00000549833 TRIM11Q96F44 468 aa8.89□□□□□ -0.99
UBE2N-204ENST00000549833 SALL4Q9UJQ4 1053 aa8.89□□□□□ -0.99
UBE2N-204ENST00000549833 NRKQ7Z2Y5 1582 aa8.89□□□□□ -0.99
UBE2N-204ENST00000549833 PXDNQ92626 1479 aa8.89□□□□□ -0.99
UBE2N-204ENST00000549833 ABCA3Q99758 1704 aa8.88□□□□□ -0.99
UBE2N-204ENST00000549833 MARF1Q9Y4F3 1742 aaKnown RBP8.88□□□□□ -0.99
UBE2N-204ENST00000549833 SHPRHQ149N8 1683 aa8.88□□□□□ -0.99
UBE2N-204ENST00000549833 EREGO14944 169 aa8.88□□□□□ -0.99
UBE2N-204ENST00000549833 EDN3P14138 238 aa8.88□□□□□ -0.99
UBE2N-204ENST00000549833 HSPA1LP34931 641 aa8.88□□□□□ -0.99
UBE2N-204ENST00000549833 XPCQ01831 940 aaPredicted RBP8.88□□□□□ -0.99
UBE2N-204ENST00000549833 TMC7Q7Z402 723 aa8.88□□□□□ -0.99
UBE2N-204ENST00000549833 ALYREFQ86V81 257 aaKnown RBP8.88□□□□□ -0.99
UBE2N-204ENST00000549833 ZFYVE28Q9HCC9 887 aa8.88□□□□□ -0.99
UBE2N-204ENST00000549833 ATP11AP98196 1134 aa8.87□□□□□ -0.99
UBE2N-204ENST00000549833 CEP120Q8N960 986 aa8.87□□□□□ -0.99
UBE2N-204ENST00000549833 POLR3GLQ9BT43 218 aa8.87□□□□□ -0.99
UBE2N-204ENST00000549833 PLVAPQ9BX97 442 aa8.87□□□□□ -0.99
UBE2N-204ENST00000549833 NIF3L1Q9GZT8 377 aa8.87□□□□□ -0.99
UBE2N-204ENST00000549833 CRYBG1Q9Y4K1 1723 aa8.87□□□□□ -0.99
UBE2N-204ENST00000549833 ACEP12821 1306 aa8.86□□□□□ -0.99
UBE2N-204ENST00000549833 CD163L1Q9NR16 1453 aa8.86□□□□□ -0.99
UBE2N-204ENST00000549833 CPNE3O75131 537 aaKnown RBP8.86□□□□□ -0.99
UBE2N-204ENST00000549833 IGHA2P01877 340 aa8.86□□□□□ -0.99
UBE2N-204ENST00000549833 ORC1Q13415 861 aa8.86□□□□□ -0.99
UBE2N-204ENST00000549833 COL9A3Q14050 684 aaPredicted RBP8.86□□□□□ -0.99
UBE2N-204ENST00000549833 GRIK5Q16478 980 aa8.86□□□□□ -0.99
UBE2N-204ENST00000549833 CEP135Q66GS9 1140 aa8.86□□□□□ -0.99
UBE2N-204ENST00000549833 GDF6Q6KF10 455 aaPredicted RBP8.86□□□□□ -0.99
UBE2N-204ENST00000549833 WFDC8Q8IUA0 241 aa8.86□□□□□ -0.99
UBE2N-204ENST00000549833 CACTIN-AS1Q8N1I8 211 aa8.86□□□□□ -0.99
UBE2N-204ENST00000549833 NGDNQ8NEJ9 315 aaKnown RBP8.86□□□□□ -0.99
UBE2N-204ENST00000549833 RASSF4Q9H2L5 321 aa8.86□□□□□ -0.99
UBE2N-204ENST00000549833 SUV39H2Q9H5I1 410 aa8.86□□□□□ -0.99
UBE2N-204ENST00000549833 POLR3AO14802 1390 aaPredicted RBP8.86□□□□□ -0.99
UBE2N-204ENST00000549833 NPHP3Q7Z494 1330 aa8.85□□□□□ -0.99
UBE2N-204ENST00000549833 PIK3C2AO00443 1686 aa8.85□□□□□ -0.99
UBE2N-204ENST00000549833 MAP2P11137 1827 aaKnown RBP8.85□□□□□ -0.99
UBE2N-204ENST00000549833 COL22A1Q8NFW1 1626 aaPredicted RBP8.85□□□□□ -0.99
UBE2N-204ENST00000549833 RASSF7Q02833 373 aa8.85□□□□□ -0.99
UBE2N-204ENST00000549833 PRRT3Q5FWE3 981 aa8.85□□□□□ -0.99
UBE2N-204ENST00000549833 TRAPPC3LQ5T215 181 aa8.85□□□□□ -0.99
UBE2N-204ENST00000549833 MSL1Q68DK7 614 aa8.85□□□□□ -0.99
UBE2N-204ENST00000549833 ASB16Q96NS5 453 aa8.85□□□□□ -0.99
UBE2N-204ENST00000549833 PBX4Q9BYU1 374 aa8.85□□□□□ -0.99
UBE2N-204ENST00000549833 DNAJC25Q9H1X3 360 aa8.85□□□□□ -0.99
UBE2N-204ENST00000549833 SLC12A5Q9H2X9 1139 aa8.85□□□□□ -0.99
UBE2N-204ENST00000549833 ANKRD26Q9UPS8 1709 aa8.85□□□□□ -0.99
UBE2N-204ENST00000549833 KIF7Q2M1P5 1343 aa8.84□□□□□ -0.99
UBE2N-204ENST00000549833 PHRF1Q9P1Y6 1649 aaKnown RBP8.84□□□□□ -0.99
UBE2N-204ENST00000549833 RGPD5Q99666 1765 aa8.84□□□□□ -0.99
UBE2N-204ENST00000549833 FAM177BA6PVY3 158 aa8.84□□□□□ -0.99
UBE2N-204ENST00000549833 KRT28Q7Z3Y7 464 aa8.84□□□□□ -0.99
UBE2N-204ENST00000549833 FOXD4L4Q8WXT5 416 aaPredicted RBP8.84□□□□□ -0.99
UBE2N-204ENST00000549833 PUS7Q96PZ0 661 aaKnown RBP8.84□□□□□ -0.99
UBE2N-204ENST00000549833 TRIM33Q9UPN9 1127 aa8.84□□□□□ -0.99
UBE2N-204ENST00000549833 USP6P35125 1406 aa8.83□□□□□ -1
UBE2N-204ENST00000549833 CPSF1Q10570 1443 aaKnown RBP8.83□□□□□ -1
UBE2N-204ENST00000549833 TREHO43280 583 aa8.83□□□□□ -1
UBE2N-204ENST00000549833 ACPPP15309 386 aa8.83□□□□□ -1
UBE2N-204ENST00000549833 COL8A1P27658 744 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms