RNA–Protein interactions for RNA: ENST00000549274.1

SMARCD1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-206ENST00000549274 ARMT1Q9H993 441 aa11.66□□□□□ -0.54
SMARCD1-206ENST00000549274 GPBP1L1Q9HC44 474 aaPredicted RBP11.66□□□□□ -0.54
SMARCD1-206ENST00000549274 ZNF70Q9UC06 446 aaPredicted RBP11.66□□□□□ -0.54
SMARCD1-206ENST00000549274 LAMB1P07942 1786 aa11.65□□□□□ -0.54
SMARCD1-206ENST00000549274 ADAMTSL1Q8N6G6 1762 aa11.65□□□□□ -0.54
SMARCD1-206ENST00000549274 M0R2C6 588 aa11.65□□□□□ -0.54
SMARCD1-206ENST00000549274 HSPD1P10809 573 aaKnown RBP11.65□□□□□ -0.54
SMARCD1-206ENST00000549274 RBM26Q5T8P6 1007 aaKnown RBP11.65□□□□□ -0.54
SMARCD1-206ENST00000549274 SAMD7Q7Z3H4 446 aa11.65□□□□□ -0.54
SMARCD1-206ENST00000549274 ADGRA1Q86SQ6 560 aa11.65□□□□□ -0.54
SMARCD1-206ENST00000549274 SULF1Q8IWU6 871 aa11.65□□□□□ -0.54
SMARCD1-206ENST00000549274 LCORLQ8N3X6 602 aa11.65□□□□□ -0.54
SMARCD1-206ENST00000549274 IL27Q8NEV9 243 aa11.65□□□□□ -0.54
SMARCD1-206ENST00000549274 SH3RF3Q8TEJ3 882 aaPredicted RBP11.65□□□□□ -0.54
SMARCD1-206ENST00000549274 FAM151AQ8WW52 585 aa11.65□□□□□ -0.54
SMARCD1-206ENST00000549274 BBXQ8WY36 941 aaPredicted RBP11.65□□□□□ -0.54
SMARCD1-206ENST00000549274 TDRD3Q9H7E2 651 aaKnown RBP11.65□□□□□ -0.54
SMARCD1-206ENST00000549274 VEZTQ9HBM0 779 aa11.65□□□□□ -0.54
SMARCD1-206ENST00000549274 ANO2Q9NQ90 1003 aa11.65□□□□□ -0.54
SMARCD1-206ENST00000549274 LAMA4Q16363 1823 aa11.65□□□□□ -0.55
SMARCD1-206ENST00000549274 NF2P35240 595 aa11.64□□□□□ -0.55
SMARCD1-206ENST00000549274 DYNLL1P63167 89 aaKnown RBP11.64□□□□□ -0.55
SMARCD1-206ENST00000549274 IMMTQ16891 758 aaKnown RBP11.64□□□□□ -0.55
SMARCD1-206ENST00000549274 SBK1Q52WX2 424 aa11.64□□□□□ -0.55
SMARCD1-206ENST00000549274 TRPM4Q8TD43 1214 aa11.64□□□□□ -0.55
SMARCD1-206ENST00000549274 TGFBRAP1Q8WUH2 860 aa11.64□□□□□ -0.55
SMARCD1-206ENST00000549274 TRIM34Q9BYJ4 488 aa11.64□□□□□ -0.55
SMARCD1-206ENST00000549274 OSBPL5Q9H0X9 879 aaPredicted RBP11.64□□□□□ -0.55
SMARCD1-206ENST00000549274 RNF41Q9H4P4 317 aaPredicted RBP11.64□□□□□ -0.55
SMARCD1-206ENST00000549274 GGA3Q9NZ52 723 aa11.64□□□□□ -0.55
SMARCD1-206ENST00000549274 PGAP2Q9UHJ9 254 aa11.64□□□□□ -0.55
SMARCD1-206ENST00000549274 ATRNL1Q5VV63 1379 aa11.64□□□□□ -0.55
SMARCD1-206ENST00000549274 FLT1P17948 1338 aa11.63□□□□□ -0.55
SMARCD1-206ENST00000549274 BAZ2AQ9UIF9 1905 aaKnown RBP11.63□□□□□ -0.55
SMARCD1-206ENST00000549274 WDHD1O75717 1129 aaPredicted RBP11.63□□□□□ -0.55
SMARCD1-206ENST00000549274 POLR3DP05423 398 aaPredicted RBP11.63□□□□□ -0.55
SMARCD1-206ENST00000549274 ZKSCAN1P17029 563 aaPredicted RBP11.63□□□□□ -0.55
SMARCD1-206ENST00000549274 YY1P25490 414 aa11.63□□□□□ -0.55
SMARCD1-206ENST00000549274 VASPP50552 380 aaPredicted RBP11.63□□□□□ -0.55
SMARCD1-206ENST00000549274 NBPF9Q3BBW0 867 aa11.63□□□□□ -0.55
SMARCD1-206ENST00000549274 SUPT20HL1Q3ZLR7 823 aa11.63□□□□□ -0.55
SMARCD1-206ENST00000549274 EAPPQ56P03 285 aaPredicted RBP11.63□□□□□ -0.55
SMARCD1-206ENST00000549274 CDC37L1Q7L3B6 337 aa11.63□□□□□ -0.55
SMARCD1-206ENST00000549274 ZNF589Q86UQ0 364 aaPredicted RBP11.63□□□□□ -0.55
SMARCD1-206ENST00000549274 ZSCAN29Q8IWY8 852 aaPredicted RBP11.63□□□□□ -0.55
SMARCD1-206ENST00000549274 IFNL3Q8IZI9 196 aa11.63□□□□□ -0.55
SMARCD1-206ENST00000549274 MAP4K1Q92918 833 aa11.63□□□□□ -0.55
SMARCD1-206ENST00000549274 SEC62Q99442 399 aaKnown RBP11.63□□□□□ -0.55
SMARCD1-206ENST00000549274 RRAGCQ9HB90 399 aa11.63□□□□□ -0.55
SMARCD1-206ENST00000549274 DCP1AQ9NPI6 582 aaPredicted RBP11.63□□□□□ -0.55
SMARCD1-206ENST00000549274 MCM9Q9NXL9 1143 aa11.63□□□□□ -0.55
SMARCD1-206ENST00000549274 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.63□□□□□ -0.55
SMARCD1-206ENST00000549274 SWAP70Q9UH65 585 aa11.63□□□□□ -0.55
SMARCD1-206ENST00000549274 CLEC11AQ9Y240 323 aa11.63□□□□□ -0.55
SMARCD1-206ENST00000549274 POLR2AP24928 1970 aaKnown RBP11.63□□□□□ -0.55
SMARCD1-206ENST00000549274 DDX60LQ5H9U9 1706 aaKnown RBP11.63□□□□□ -0.55
SMARCD1-206ENST00000549274 MYH8P13535 1937 aa11.62□□□□□ -0.55
SMARCD1-206ENST00000549274 CLRN2A0PK11 232 aa11.62□□□□□ -0.55
SMARCD1-206ENST00000549274 GSG1L2A8MUP6 293 aa11.62□□□□□ -0.55
SMARCD1-206ENST00000549274 ZNF213O14771 459 aa11.62□□□□□ -0.55
SMARCD1-206ENST00000549274 PICALMQ13492 652 aa11.62□□□□□ -0.55
SMARCD1-206ENST00000549274 KRT32Q14532 448 aa11.62□□□□□ -0.55
SMARCD1-206ENST00000549274 C8orf34Q49A92 452 aa11.62□□□□□ -0.55
SMARCD1-206ENST00000549274 ANGEL2Q5VTE6 544 aaKnown RBP11.62□□□□□ -0.55
SMARCD1-206ENST00000549274 DCAF15Q66K64 600 aa11.62□□□□□ -0.55
SMARCD1-206ENST00000549274 CCDC129Q6ZRS4 1044 aa11.62□□□□□ -0.55
SMARCD1-206ENST00000549274 FOXP4Q8IVH2 680 aaPredicted RBP11.62□□□□□ -0.55
SMARCD1-206ENST00000549274 SDR42E1Q8WUS8 393 aa11.62□□□□□ -0.55
SMARCD1-206ENST00000549274 EHD4Q9H223 541 aa11.62□□□□□ -0.55
SMARCD1-206ENST00000549274 PI4KBQ9UBF8 816 aa11.62□□□□□ -0.55
SMARCD1-206ENST00000549274 HERC5Q9UII4 1024 aaKnown RBP11.62□□□□□ -0.55
SMARCD1-206ENST00000549274 SHTN1A0MZ66 631 aa11.61□□□□□ -0.55
SMARCD1-206ENST00000549274 POTECB2RU33 542 aa11.61□□□□□ -0.55
SMARCD1-206ENST00000549274 TCP10L2B9ZVM9 353 aa11.61□□□□□ -0.55
SMARCD1-206ENST00000549274 PDE4BQ07343 736 aa11.61□□□□□ -0.55
SMARCD1-206ENST00000549274 PPP4R3BQ5MIZ7 849 aa11.61□□□□□ -0.55
SMARCD1-206ENST00000549274 KRT26Q7Z3Y9 468 aa11.61□□□□□ -0.55
SMARCD1-206ENST00000549274 MAPKAPK5Q8IW41 473 aa11.61□□□□□ -0.55
SMARCD1-206ENST00000549274 LSG1Q9H089 658 aaKnown RBP11.61□□□□□ -0.55
SMARCD1-206ENST00000549274 DEFB129Q9H1M3 183 aa11.61□□□□□ -0.55
SMARCD1-206ENST00000549274 CNNM2Q9H8M5 875 aa11.61□□□□□ -0.55
SMARCD1-206ENST00000549274 MKRN1Q9UHC7 482 aaKnown RBP11.61□□□□□ -0.55
SMARCD1-206ENST00000549274 ANAPC4Q9UJX5 808 aa11.61□□□□□ -0.55
SMARCD1-206ENST00000549274 ROBO3Q96MS0 1386 aa11.6□□□□□ -0.55
SMARCD1-206ENST00000549274 TBC1D12O60347 775 aa11.6□□□□□ -0.55
SMARCD1-206ENST00000549274 FGAP02671 866 aa11.6□□□□□ -0.55
SMARCD1-206ENST00000549274 HIRAP54198 1017 aaPredicted RBP11.6□□□□□ -0.55
SMARCD1-206ENST00000549274 ANAPC15P60006 121 aa11.6□□□□□ -0.55
SMARCD1-206ENST00000549274 TRDNQ13061 729 aa11.6□□□□□ -0.55
SMARCD1-206ENST00000549274 RASA3Q14644 834 aa11.6□□□□□ -0.55
SMARCD1-206ENST00000549274 SLFNL1Q499Z3 407 aa11.6□□□□□ -0.55
SMARCD1-206ENST00000549274 CRACR2BQ8N4Y2 399 aaPredicted RBP11.6□□□□□ -0.55
SMARCD1-206ENST00000549274 ZNF526Q8TF50 670 aaPredicted RBP11.6□□□□□ -0.55
SMARCD1-206ENST00000549274 CSRNP1Q96S65 589 aa11.6□□□□□ -0.55
SMARCD1-206ENST00000549274 BACH2Q9BYV9 841 aa11.6□□□□□ -0.55
SMARCD1-206ENST00000549274 GINM1Q9NU53 330 aa11.6□□□□□ -0.55
SMARCD1-206ENST00000549274 FAM198AQ9UFP1 575 aa11.6□□□□□ -0.55
SMARCD1-206ENST00000549274 RBM8AQ9Y5S9 174 aaKnown RBP11.6□□□□□ -0.55
SMARCD1-206ENST00000549274 UNCXA6NJT0 531 aa11.59□□□□□ -0.55
SMARCD1-206ENST00000549274 USP17L12C9JPN9 530 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms