RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 UBE2OQ9C0C9 1292 aaKnown RBP15.34■□□□□ 0.05
DDX54-206ENST00000549271 NBPF3Q9H094 633 aa15.34■□□□□ 0.05
DDX54-206ENST00000549271 PHIPQ8WWQ0 1821 aa15.33■□□□□ 0.05
DDX54-206ENST00000549271 A0A0G2JLL6 359 aaPredicted RBP15.33■□□□□ 0.04
DDX54-206ENST00000549271 PRRT2Q7Z6L0 340 aaPredicted RBP15.33■□□□□ 0.04
DDX54-206ENST00000549271 FAM151AQ8WW52 585 aa15.33■□□□□ 0.04
DDX54-206ENST00000549271 SRCIN1Q9C0H9 1055 aa15.33■□□□□ 0.04
DDX54-206ENST00000549271 C9orf78Q9NZ63 289 aaPredicted RBP15.33■□□□□ 0.04
DDX54-206ENST00000549271 IQSEC3Q9UPP2 1182 aaPredicted RBP15.33■□□□□ 0.04
DDX54-206ENST00000549271 SLC45A1Q9Y2W3 748 aa15.33■□□□□ 0.04
DDX54-206ENST00000549271 TTC28Q96AY4 2481 aa15.32■□□□□ 0.04
DDX54-206ENST00000549271 CHAF1AQ13111 956 aaPredicted RBP15.32■□□□□ 0.04
DDX54-206ENST00000549271 TAF7LQ5H9L4 462 aa15.32■□□□□ 0.04
DDX54-206ENST00000549271 HHIPL2Q6UWX4 724 aa15.32■□□□□ 0.04
DDX54-206ENST00000549271 UTYO14607 1347 aa15.32■□□□□ 0.04
DDX54-206ENST00000549271 MUC3AQ02505 3323 aa15.31■□□□□ 0.04
DDX54-206ENST00000549271 SLFN5Q08AF3 891 aa15.31■□□□□ 0.04
DDX54-206ENST00000549271 FASTKD5Q7L8L6 764 aaKnown RBP15.31■□□□□ 0.04
DDX54-206ENST00000549271 KAZALD1Q96I82 304 aa15.31■□□□□ 0.04
DDX54-206ENST00000549271 C11orf49Q9H6J7 331 aa15.31■□□□□ 0.04
DDX54-206ENST00000549271 SUGT1Q9Y2Z0 365 aa15.31■□□□□ 0.04
DDX54-206ENST00000549271 DOCK2Q92608 1830 aa15.31■□□□□ 0.04
DDX54-206ENST00000549271 E9PSI1 815 aa15.3■□□□□ 0.04
DDX54-206ENST00000549271 PLXNB2O15031 1838 aa15.3■□□□□ 0.04
DDX54-206ENST00000549271 MAST3O60307 1309 aa15.3■□□□□ 0.04
DDX54-206ENST00000549271 COA7Q96BR5 231 aa15.3■□□□□ 0.04
DDX54-206ENST00000549271 CDCA7LQ96GN5 454 aa15.3■□□□□ 0.04
DDX54-206ENST00000549271 PUS3Q9BZE2 481 aaKnown RBP15.3■□□□□ 0.04
DDX54-206ENST00000549271 MYH13Q9UKX3 1938 aa15.3■□□□□ 0.04
DDX54-206ENST00000549271 TAOK2Q9UL54 1235 aa15.3■□□□□ 0.04
DDX54-206ENST00000549271 OGDHLQ9ULD0 1010 aa15.3■□□□□ 0.04
DDX54-206ENST00000549271 ATRNL1Q5VV63 1379 aa15.29■□□□□ 0.04
DDX54-206ENST00000549271 PFASO15067 1338 aa15.29■□□□□ 0.04
DDX54-206ENST00000549271 HMGCRP04035 888 aa15.29■□□□□ 0.04
DDX54-206ENST00000549271 RABL6Q3YEC7 729 aaPredicted RBP15.29■□□□□ 0.04
DDX54-206ENST00000549271 SLC4A10Q6U841 1118 aa15.29■□□□□ 0.04
DDX54-206ENST00000549271 VPS37DQ86XT2 251 aa15.29■□□□□ 0.04
DDX54-206ENST00000549271 TRMT2AQ8IZ69 625 aaKnown RBP15.29■□□□□ 0.04
DDX54-206ENST00000549271 MIER1Q8N108 512 aa15.29■□□□□ 0.04
DDX54-206ENST00000549271 SUCLG2Q96I99 432 aa15.29■□□□□ 0.04
DDX54-206ENST00000549271 AFG3L2Q9Y4W6 797 aa15.29■□□□□ 0.04
DDX54-206ENST00000549271 DOCK1Q14185 1865 aa15.29■□□□□ 0.04
DDX54-206ENST00000549271 MROH5Q6ZUA9 1318 aa15.28■□□□□ 0.04
DDX54-206ENST00000549271 PHF20L1A8MW92 1017 aa15.28■□□□□ 0.04
DDX54-206ENST00000549271 NBPF7P0C2Y1 421 aaPredicted RBP15.28■□□□□ 0.04
DDX54-206ENST00000549271 PTPRAP18433 802 aa15.28■□□□□ 0.04
DDX54-206ENST00000549271 TCP10Q12799 353 aa15.28■□□□□ 0.04
DDX54-206ENST00000549271 DIEXFQ68CQ4 756 aaKnown RBP15.28■□□□□ 0.04
DDX54-206ENST00000549271 GADL1Q6ZQY3 521 aa15.28■□□□□ 0.04
DDX54-206ENST00000549271 SMCR8Q8TEV9 937 aaPredicted RBP15.28■□□□□ 0.04
DDX54-206ENST00000549271 HMX1Q9NP08 348 aaPredicted RBP15.28■□□□□ 0.04
DDX54-206ENST00000549271 ZHX2Q9Y6X8 837 aa15.28■□□□□ 0.04
DDX54-206ENST00000549271 FRAT2O75474 233 aaPredicted RBP15.27■□□□□ 0.04
DDX54-206ENST00000549271 NFIAQ12857 509 aa15.27■□□□□ 0.04
DDX54-206ENST00000549271 TRIM32Q13049 653 aa15.27■□□□□ 0.04
DDX54-206ENST00000549271 SCYL3Q8IZE3 742 aa15.27■□□□□ 0.04
DDX54-206ENST00000549271 ANKRD13CQ8N6S4 541 aa15.27■□□□□ 0.04
DDX54-206ENST00000549271 FAM198AQ9UFP1 575 aa15.27■□□□□ 0.04
DDX54-206ENST00000549271 GJD2Q9UKL4 321 aa15.27■□□□□ 0.04
DDX54-206ENST00000549271 CDH23Q9H251 3354 aa15.26■□□□□ 0.03
DDX54-206ENST00000549271 COL6A1P12109 1028 aa15.26■□□□□ 0.03
DDX54-206ENST00000549271 FAM110CQ1W6H9 321 aa15.26■□□□□ 0.03
DDX54-206ENST00000549271 CAVIN4Q5BKX8 364 aa15.26■□□□□ 0.03
DDX54-206ENST00000549271 CDC42EP5Q6NZY7 148 aa15.26■□□□□ 0.03
DDX54-206ENST00000549271 MRPL50Q8N5N7 158 aaKnown RBP15.26■□□□□ 0.03
DDX54-206ENST00000549271 FAM161BQ96MY7 647 aa15.26■□□□□ 0.03
DDX54-206ENST00000549271 PTPRCP08575 1304 aa15.25■□□□□ 0.03
DDX54-206ENST00000549271 MDM2Q00987 491 aaPredicted RBP15.25■□□□□ 0.03
DDX54-206ENST00000549271 ANKRD44Q8N8A2 993 aa15.25■□□□□ 0.03
DDX54-206ENST00000549271 VGLL2Q8N8G2 317 aa15.25■□□□□ 0.03
DDX54-206ENST00000549271 BICC1Q9H694 974 aaKnown RBP15.25■□□□□ 0.03
DDX54-206ENST00000549271 PICK1Q9NRD5 415 aa15.25■□□□□ 0.03
DDX54-206ENST00000549271 AGTPBP1Q9UPW5 1226 aa15.25■□□□□ 0.03
DDX54-206ENST00000549271 DAGLAQ9Y4D2 1042 aa15.25■□□□□ 0.03
DDX54-206ENST00000549271 LOC285556D6RIA3 1793 aa15.25■□□□□ 0.03
DDX54-206ENST00000549271 MAST2Q6P0Q8 1798 aa15.24■□□□□ 0.03
DDX54-206ENST00000549271 MAP3K21Q5TCX8 1036 aa15.24■□□□□ 0.03
DDX54-206ENST00000549271 ZFPM1Q8IX07 1006 aa15.24■□□□□ 0.03
DDX54-206ENST00000549271 SSH1Q8WYL5 1049 aa15.24■□□□□ 0.03
DDX54-206ENST00000549271 KIF16BQ96L93 1317 aa15.23■□□□□ 0.03
DDX54-206ENST00000549271 FRMPD3Q5JV73 1810 aa15.23■□□□□ 0.03
DDX54-206ENST00000549271 PDE8BO95263 885 aa15.23■□□□□ 0.03
DDX54-206ENST00000549271 MAP3K10Q02779 954 aa15.23■□□□□ 0.03
DDX54-206ENST00000549271 LRRC26Q2I0M4 334 aa15.23■□□□□ 0.03
DDX54-206ENST00000549271 ZNF697Q5TEC3 545 aa15.23■□□□□ 0.03
DDX54-206ENST00000549271 MAFAQ8NHW3 353 aaPredicted RBP15.23■□□□□ 0.03
DDX54-206ENST00000549271 TRIB2Q92519 343 aa15.23■□□□□ 0.03
DDX54-206ENST00000549271 CDX2Q99626 313 aaPredicted RBP15.23■□□□□ 0.03
DDX54-206ENST00000549271 COL9A1P20849 921 aa15.22■□□□□ 0.03
DDX54-206ENST00000549271 DIXDC1Q155Q3 683 aa15.22■□□□□ 0.03
DDX54-206ENST00000549271 LRRC24Q50LG9 513 aa15.22■□□□□ 0.03
DDX54-206ENST00000549271 METTL24Q5JXM2 366 aa15.22■□□□□ 0.03
DDX54-206ENST00000549271 TREML2Q5T2D2 321 aa15.22■□□□□ 0.03
DDX54-206ENST00000549271 USP44Q9H0E7 712 aa15.22■□□□□ 0.03
DDX54-206ENST00000549271 PNMA3Q9UL41 463 aa15.22■□□□□ 0.03
DDX54-206ENST00000549271 LTBP2Q14767 1821 aa15.22■□□□□ 0.03
DDX54-206ENST00000549271 TRIM75PA6NK02 468 aa15.21■□□□□ 0.03
DDX54-206ENST00000549271 GCLCP48506 637 aaPredicted RBP15.21■□□□□ 0.03
DDX54-206ENST00000549271 WDR66Q8TBY9 1149 aa15.21■□□□□ 0.03
DDX54-206ENST00000549271 USP40Q9NVE5 1235 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms