RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 USP20Q9Y2K6 914 aa5.9□□□□□ -1.46
SCAF11-212ENST00000549162 SEC23AQ15436 765 aa5.9□□□□□ -1.47
SCAF11-212ENST00000549162 FAM98CQ17RN3 349 aaKnown RBP5.9□□□□□ -1.47
SCAF11-212ENST00000549162 TMEM259Q4ZIN3 620 aa5.9□□□□□ -1.47
SCAF11-212ENST00000549162 RUFY2Q8WXA3 655 aa5.9□□□□□ -1.47
SCAF11-212ENST00000549162 LZTS2Q9BRK4 669 aa5.9□□□□□ -1.47
SCAF11-212ENST00000549162 THUMPD2Q9BTF0 503 aaKnown RBP5.9□□□□□ -1.47
SCAF11-212ENST00000549162 RBM27Q9P2N5 1060 aaKnown RBP5.9□□□□□ -1.47
SCAF11-212ENST00000549162 NLRC5Q86WI3 1866 aa5.9□□□□□ -1.47
SCAF11-212ENST00000549162 C16orf86Q6ZW13 317 aa5.9□□□□□ -1.47
SCAF11-212ENST00000549162 CNTROBQ8N137 903 aa5.9□□□□□ -1.47
SCAF11-212ENST00000549162 EYA3Q99504 573 aa5.9□□□□□ -1.47
SCAF11-212ENST00000549162 NBPF3Q9H094 633 aa5.9□□□□□ -1.47
SCAF11-212ENST00000549162 RNF113AO15541 343 aaKnown RBP5.89□□□□□ -1.47
SCAF11-212ENST00000549162 DDAH1O94760 285 aa5.89□□□□□ -1.47
SCAF11-212ENST00000549162 REC8O95072 547 aa5.89□□□□□ -1.47
SCAF11-212ENST00000549162 OAZ1P54368 228 aa5.89□□□□□ -1.47
SCAF11-212ENST00000549162 RHBDL3P58872 404 aa5.89□□□□□ -1.47
SCAF11-212ENST00000549162 FUT2Q10981 343 aa5.89□□□□□ -1.47
SCAF11-212ENST00000549162 RASA3Q14644 834 aa5.89□□□□□ -1.47
SCAF11-212ENST00000549162 ARID5BQ14865 1188 aa5.89□□□□□ -1.47
SCAF11-212ENST00000549162 DACT2Q5SW24 774 aa5.89□□□□□ -1.47
SCAF11-212ENST00000549162 PANK1Q8TE04 598 aa5.89□□□□□ -1.47
SCAF11-212ENST00000549162 TMEM87BQ96K49 555 aa5.89□□□□□ -1.47
SCAF11-212ENST00000549162 ARPP21Q9UBL0 812 aaPredicted RBP5.89□□□□□ -1.47
SCAF11-212ENST00000549162 PALD1Q9ULE6 856 aa5.89□□□□□ -1.47
SCAF11-212ENST00000549162 ANKRD1Q15327 319 aa5.89□□□□□ -1.47
SCAF11-212ENST00000549162 PPP2R2DQ66LE6 453 aa5.89□□□□□ -1.47
SCAF11-212ENST00000549162 FAM84BQ96KN1 310 aaPredicted RBP5.89□□□□□ -1.47
SCAF11-212ENST00000549162 DRC1Q96MC2 740 aa5.89□□□□□ -1.47
SCAF11-212ENST00000549162 A1BGP04217 495 aa5.89□□□□□ -1.47
SCAF11-212ENST00000549162 NSUN4Q96CB9 384 aaKnown RBP5.89□□□□□ -1.47
SCAF11-212ENST00000549162 OSBPL5Q9H0X9 879 aaPredicted RBP5.89□□□□□ -1.47
SCAF11-212ENST00000549162 CNNM2Q9H8M5 875 aa5.89□□□□□ -1.47
SCAF11-212ENST00000549162 DAAM1Q9Y4D1 1078 aa5.89□□□□□ -1.47
SCAF11-212ENST00000549162 RPTORQ8N122 1335 aa5.89□□□□□ -1.47
SCAF11-212ENST00000549162 PALM3A6NDB9 673 aaPredicted RBP5.88□□□□□ -1.47
SCAF11-212ENST00000549162 KRT24Q2M2I5 525 aa5.88□□□□□ -1.47
SCAF11-212ENST00000549162 NIPA1Q7RTP0 329 aa5.88□□□□□ -1.47
SCAF11-212ENST00000549162 WDR18Q9BV38 432 aa5.88□□□□□ -1.47
SCAF11-212ENST00000549162 GTPBP4Q9BZE4 634 aaKnown RBP5.88□□□□□ -1.47
SCAF11-212ENST00000549162 ZNF541Q9H0D2 1346 aa5.88□□□□□ -1.47
SCAF11-212ENST00000549162 PIK3CDO00329 1044 aa5.88□□□□□ -1.47
SCAF11-212ENST00000549162 POU5F1Q01860 360 aaKnown RBP5.88□□□□□ -1.47
SCAF11-212ENST00000549162 SREK1Q8WXA9 508 aaKnown RBP5.88□□□□□ -1.47
SCAF11-212ENST00000549162 MYD88Q99836 296 aa5.88□□□□□ -1.47
SCAF11-212ENST00000549162 KCND1Q9NSA2 647 aa5.88□□□□□ -1.47
SCAF11-212ENST00000549162 KIAA1549LQ6ZVL6 1849 aa5.88□□□□□ -1.47
SCAF11-212ENST00000549162 MYO1BO43795 1136 aa5.88□□□□□ -1.47
SCAF11-212ENST00000549162 SERPINB2P05120 415 aa5.88□□□□□ -1.47
SCAF11-212ENST00000549162 ITGA6P23229 1130 aa5.88□□□□□ -1.47
SCAF11-212ENST00000549162 FOXK1P85037 733 aa5.88□□□□□ -1.47
SCAF11-212ENST00000549162 FKBP5Q13451 457 aaPredicted RBP5.88□□□□□ -1.47
SCAF11-212ENST00000549162 FTSJ3Q8IY81 847 aaKnown RBP5.88□□□□□ -1.47
SCAF11-212ENST00000549162 TBC1D16Q8TBP0 767 aa5.88□□□□□ -1.47
SCAF11-212ENST00000549162 STRBPQ96SI9 672 aaKnown RBP5.88□□□□□ -1.47
SCAF11-212ENST00000549162 DHX36Q9H2U1 1008 aaKnown RBP5.88□□□□□ -1.47
SCAF11-212ENST00000549162 MKNK2Q9HBH9 465 aa5.88□□□□□ -1.47
SCAF11-212ENST00000549162 STK32BQ9NY57 414 aa5.88□□□□□ -1.47
SCAF11-212ENST00000549162 KCNQ2O43526 872 aa5.87□□□□□ -1.47
SCAF11-212ENST00000549162 PFKFB2O60825 505 aa5.87□□□□□ -1.47
SCAF11-212ENST00000549162 ADAMTS2O95450 1211 aa5.87□□□□□ -1.47
SCAF11-212ENST00000549162 LMOD1P29536 600 aaPredicted RBP5.87□□□□□ -1.47
SCAF11-212ENST00000549162 CHADLQ6NUI6 762 aa5.87□□□□□ -1.47
SCAF11-212ENST00000549162 DGKHQ86XP1 1220 aa5.87□□□□□ -1.47
SCAF11-212ENST00000549162 TNFRSF25Q93038 417 aa5.87□□□□□ -1.47
SCAF11-212ENST00000549162 GMCL1Q96IK5 515 aa5.87□□□□□ -1.47
SCAF11-212ENST00000549162 FARP1Q9Y4F1 1045 aaPredicted RBP5.87□□□□□ -1.47
SCAF11-212ENST00000549162 DHX16O60231 1041 aaKnown RBP5.87□□□□□ -1.47
SCAF11-212ENST00000549162 IFIT5Q13325 482 aaKnown RBP5.87□□□□□ -1.47
SCAF11-212ENST00000549162 ERFEQ4G0M1 354 aa5.87□□□□□ -1.47
SCAF11-212ENST00000549162 MCMDC2Q4G0Z9 681 aa5.87□□□□□ -1.47
SCAF11-212ENST00000549162 NAA16Q6N069 864 aaPredicted RBP5.87□□□□□ -1.47
SCAF11-212ENST00000549162 TMTC2Q8N394 836 aa5.87□□□□□ -1.47
SCAF11-212ENST00000549162 JMYQ8N9B5 988 aa5.87□□□□□ -1.47
SCAF11-212ENST00000549162 HOOK2Q96ED9 719 aa5.87□□□□□ -1.47
SCAF11-212ENST00000549162 C8orf37Q96NL8 207 aa5.87□□□□□ -1.47
SCAF11-212ENST00000549162 CDHR5Q9HBB8 845 aa5.87□□□□□ -1.47
SCAF11-212ENST00000549162 NRBP1Q9UHY1 535 aa5.87□□□□□ -1.47
SCAF11-212ENST00000549162 CTNNA3Q9UI47 895 aa5.87□□□□□ -1.47
SCAF11-212ENST00000549162 TNNQ9UQP3 1299 aa5.87□□□□□ -1.47
SCAF11-212ENST00000549162 RPS8P62241 208 aaKnown RBP5.87□□□□□ -1.47
SCAF11-212ENST00000549162 XPCQ01831 940 aaPredicted RBP5.87□□□□□ -1.47
SCAF11-212ENST00000549162 NFIL3Q16649 462 aa5.87□□□□□ -1.47
SCAF11-212ENST00000549162 HYIQ5T013 277 aa5.87□□□□□ -1.47
SCAF11-212ENST00000549162 TBC1D9Q6ZT07 1266 aa5.87□□□□□ -1.47
SCAF11-212ENST00000549162 ZC3H3Q8IXZ2 948 aaKnown RBP5.87□□□□□ -1.47
SCAF11-212ENST00000549162 UCN2Q96RP3 112 aa5.87□□□□□ -1.47
SCAF11-212ENST00000549162 SEZ6LQ9BYH1 1024 aa5.87□□□□□ -1.47
SCAF11-212ENST00000549162 HERC5Q9UII4 1024 aaKnown RBP5.87□□□□□ -1.47
SCAF11-212ENST00000549162 PLXNA3P51805 1871 aa5.86□□□□□ -1.47
SCAF11-212ENST00000549162 CYP3A7-CYP3A51PA0A087WV96 503 aa5.86□□□□□ -1.47
SCAF11-212ENST00000549162 HOXD8P13378 290 aaPredicted RBP5.86□□□□□ -1.47
SCAF11-212ENST00000549162 CYP3A7P24462 503 aa5.86□□□□□ -1.47
SCAF11-212ENST00000549162 COPB2P35606 906 aa5.86□□□□□ -1.47
SCAF11-212ENST00000549162 MAP3K9P80192 1104 aa5.86□□□□□ -1.47
SCAF11-212ENST00000549162 RIC3Q7Z5B4 369 aa5.86□□□□□ -1.47
SCAF11-212ENST00000549162 CLASRPQ8N2M8 674 aaKnown RBP5.86□□□□□ -1.47
SCAF11-212ENST00000549162 RRP7AQ9Y3A4 280 aaKnown RBP5.86□□□□□ -1.47
SCAF11-212ENST00000549162 PPEF1O14829 653 aaPredicted RBP5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms