RNA–Protein interactions for RNA: ENST00000548877.1

CDX2-202, Transcript of caudal type homeobox 2, humanhuman

TSL 3

Gene CDX2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-202ENST00000548877 EVI5O60447 810 aa16.97■□□□□ 0.31
CDX2-202ENST00000548877 INHAP05111 366 aa16.97■□□□□ 0.31
CDX2-202ENST00000548877 BMP8BP34820 402 aa16.97■□□□□ 0.31
CDX2-202ENST00000548877 SCYL3Q8IZE3 742 aa16.97■□□□□ 0.31
CDX2-202ENST00000548877 LPIN2Q92539 896 aa16.97■□□□□ 0.31
CDX2-202ENST00000548877 IDI2Q9BXS1 227 aa16.97■□□□□ 0.31
CDX2-202ENST00000548877 AFG3L2Q9Y4W6 797 aa16.97■□□□□ 0.31
CDX2-202ENST00000548877 ENTPD3O75355 529 aa16.96■□□□□ 0.31
CDX2-202ENST00000548877 PTPRAP18433 802 aa16.96■□□□□ 0.31
CDX2-202ENST00000548877 RFX5P48382 616 aaPredicted RBP16.96■□□□□ 0.31
CDX2-202ENST00000548877 DIXDC1Q155Q3 683 aa16.96■□□□□ 0.31
CDX2-202ENST00000548877 KLHDC4Q8TBB5 520 aa16.96■□□□□ 0.31
CDX2-202ENST00000548877 ZHX2Q9Y6X8 837 aa16.96■□□□□ 0.31
CDX2-202ENST00000548877 RFX7Q2KHR2 1363 aa16.95■□□□□ 0.3
CDX2-202ENST00000548877 EYA2O00167 538 aa16.95■□□□□ 0.3
CDX2-202ENST00000548877 TFRCP02786 760 aaKnown RBP16.95■□□□□ 0.3
CDX2-202ENST00000548877 SLC5A1P13866 664 aa16.95■□□□□ 0.3
CDX2-202ENST00000548877 ELNP15502 786 aa16.95■□□□□ 0.3
CDX2-202ENST00000548877 PRDX5P30044 214 aa16.95■□□□□ 0.3
CDX2-202ENST00000548877 ZFPM1Q8IX07 1006 aa16.95■□□□□ 0.3
CDX2-202ENST00000548877 DEFB118Q96PH6 123 aa16.95■□□□□ 0.3
CDX2-202ENST00000548877 GDF15Q99988 308 aa16.95■□□□□ 0.3
CDX2-202ENST00000548877 USP40Q9NVE5 1235 aa16.95■□□□□ 0.3
CDX2-202ENST00000548877 DOCK1Q14185 1865 aa16.95■□□□□ 0.3
CDX2-202ENST00000548877 MYH2Q9UKX2 1941 aa16.94■□□□□ 0.3
CDX2-202ENST00000548877 TNPO2O14787 897 aaKnown RBP16.94■□□□□ 0.3
CDX2-202ENST00000548877 MNX1P50219 401 aaPredicted RBP16.94■□□□□ 0.3
CDX2-202ENST00000548877 ANKLE1Q8NAG6 615 aa16.94■□□□□ 0.3
CDX2-202ENST00000548877 LRCH3Q96II8 777 aa16.94■□□□□ 0.3
CDX2-202ENST00000548877 USP44Q9H0E7 712 aa16.94■□□□□ 0.3
CDX2-202ENST00000548877 PICK1Q9NRD5 415 aa16.94■□□□□ 0.3
CDX2-202ENST00000548877 STAP2Q9UGK3 403 aa16.94■□□□□ 0.3
CDX2-202ENST00000548877 FBXO3Q9UK99 471 aa16.94■□□□□ 0.3
CDX2-202ENST00000548877 CUL9Q8IWT3 2517 aa16.94■□□□□ 0.3
CDX2-202ENST00000548877 SEMA3EO15041 775 aa16.93■□□□□ 0.3
CDX2-202ENST00000548877 LDHBP07195 334 aaKnown RBP16.93■□□□□ 0.3
CDX2-202ENST00000548877 ATG9AQ7Z3C6 839 aa16.93■□□□□ 0.3
CDX2-202ENST00000548877 GAKO14976 1311 aa16.93■□□□□ 0.3
CDX2-202ENST00000548877 PTPRCP08575 1304 aa16.93■□□□□ 0.3
CDX2-202ENST00000548877 CTNND1O60716 968 aaKnown RBP16.92■□□□□ 0.3
CDX2-202ENST00000548877 RGS3P49796 1198 aa16.92■□□□□ 0.3
CDX2-202ENST00000548877 SH3BP5LQ7L8J4 393 aa16.92■□□□□ 0.3
CDX2-202ENST00000548877 NECAB2Q7Z6G3 386 aa16.92■□□□□ 0.3
CDX2-202ENST00000548877 FAM163AQ96GL9 167 aaPredicted RBP16.92■□□□□ 0.3
CDX2-202ENST00000548877 PAWRQ96IZ0 340 aaKnown RBP16.92■□□□□ 0.3
CDX2-202ENST00000548877 AGTPBP1Q9UPW5 1226 aa16.92■□□□□ 0.3
CDX2-202ENST00000548877 SALL2Q9Y467 1007 aaPredicted RBP16.92■□□□□ 0.3
CDX2-202ENST00000548877 FAM110CQ1W6H9 321 aa16.91■□□□□ 0.3
CDX2-202ENST00000548877 GADL1Q6ZQY3 521 aa16.91■□□□□ 0.3
CDX2-202ENST00000548877 MRPL50Q8N5N7 158 aaKnown RBP16.91■□□□□ 0.3
CDX2-202ENST00000548877 COA7Q96BR5 231 aa16.91■□□□□ 0.3
CDX2-202ENST00000548877 GNL3LQ9NVN8 582 aaKnown RBP16.91■□□□□ 0.3
CDX2-202ENST00000548877 DENND2AQ9ULE3 1009 aa16.91■□□□□ 0.3
CDX2-202ENST00000548877 TBC1D12O60347 775 aa16.9■□□□□ 0.3
CDX2-202ENST00000548877 CIAO1O76071 339 aa16.9■□□□□ 0.3
CDX2-202ENST00000548877 LRIT3Q3SXY7 679 aa16.9■□□□□ 0.3
CDX2-202ENST00000548877 SMCR8Q8TEV9 937 aaPredicted RBP16.9■□□□□ 0.3
CDX2-202ENST00000548877 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.9■□□□□ 0.3
CDX2-202ENST00000548877 MRS2Q9HD23 443 aa16.9■□□□□ 0.3
CDX2-202ENST00000548877 LRRFIP2Q9Y608 721 aaKnown RBP16.9■□□□□ 0.3
CDX2-202ENST00000548877 DDTLA6NHG4 134 aaPredicted RBP16.89■□□□□ 0.29
CDX2-202ENST00000548877 NPM3O75607 178 aaKnown RBP16.89■□□□□ 0.29
CDX2-202ENST00000548877 ZGPATQ8N5A5 531 aaKnown RBP16.89■□□□□ 0.29
CDX2-202ENST00000548877 PNMA3Q9UL41 463 aa16.89■□□□□ 0.29
CDX2-202ENST00000548877 PDS5AQ29RF7 1337 aaKnown RBP16.89■□□□□ 0.29
CDX2-202ENST00000548877 LOC285556D6RIA3 1793 aa16.89■□□□□ 0.29
CDX2-202ENST00000548877 GCLCP48506 637 aaPredicted RBP16.88■□□□□ 0.29
CDX2-202ENST00000548877 ATP2B3Q16720 1220 aa16.88■□□□□ 0.29
CDX2-202ENST00000548877 ANKRD13CQ8N6S4 541 aa16.88■□□□□ 0.29
CDX2-202ENST00000548877 PROCA1Q8NCQ7 364 aaPredicted RBP16.88■□□□□ 0.29
CDX2-202ENST00000548877 DIS3LQ8TF46 1054 aaKnown RBP16.88■□□□□ 0.29
CDX2-202ENST00000548877 GJD2Q9UKL4 321 aa16.88■□□□□ 0.29
CDX2-202ENST00000548877 STXBP5LQ9Y2K9 1186 aa16.88■□□□□ 0.29
CDX2-202ENST00000548877 HMGCRP04035 888 aa16.87■□□□□ 0.29
CDX2-202ENST00000548877 TBC1D2Q9BYX2 928 aa16.87■□□□□ 0.29
CDX2-202ENST00000548877 DDX4Q9NQI0 724 aaKnown RBP16.87■□□□□ 0.29
CDX2-202ENST00000548877 CEP126Q9P2H0 1117 aa16.87■□□□□ 0.29
CDX2-202ENST00000548877 RPTORQ8N122 1335 aa16.87■□□□□ 0.29
CDX2-202ENST00000548877 ZNF521Q96K83 1311 aa16.87■□□□□ 0.29
CDX2-202ENST00000548877 PLXNB2O15031 1838 aa16.86■□□□□ 0.29
CDX2-202ENST00000548877 TRIM75PA6NK02 468 aa16.86■□□□□ 0.29
CDX2-202ENST00000548877 PHKA1P46020 1223 aa16.86■□□□□ 0.29
CDX2-202ENST00000548877 TREML2Q5T2D2 321 aa16.86■□□□□ 0.29
CDX2-202ENST00000548877 ZSCAN29Q8IWY8 852 aaPredicted RBP16.86■□□□□ 0.29
CDX2-202ENST00000548877 SLF2Q8IX21 1173 aa16.86■□□□□ 0.29
CDX2-202ENST00000548877 NBPF3Q9H094 633 aa16.86■□□□□ 0.29
CDX2-202ENST00000548877 OGDHLQ9ULD0 1010 aa16.86■□□□□ 0.29
CDX2-202ENST00000548877 DDX60LQ5H9U9 1706 aaKnown RBP16.86■□□□□ 0.29
CDX2-202ENST00000548877 MAP4K4O95819 1239 aaPredicted RBP16.85■□□□□ 0.29
CDX2-202ENST00000548877 C7orf61Q8IZ16 206 aa16.85■□□□□ 0.29
CDX2-202ENST00000548877 DEFB123Q8N688 67 aa16.85■□□□□ 0.29
CDX2-202ENST00000548877 OSBPL5Q9H0X9 879 aaPredicted RBP16.85■□□□□ 0.29
CDX2-202ENST00000548877 HMX1Q9NP08 348 aaPredicted RBP16.85■□□□□ 0.29
CDX2-202ENST00000548877 COL2A1P02458 1487 aaPredicted RBP16.85■□□□□ 0.29
CDX2-202ENST00000548877 GPR75-ASB3A0A0A6YYF3 556 aa16.84■□□□□ 0.29
CDX2-202ENST00000548877 SLURP2P0DP57 97 aa16.84■□□□□ 0.29
CDX2-202ENST00000548877 IL15P40933 162 aaPredicted RBP16.84■□□□□ 0.29
CDX2-202ENST00000548877 RHBDL3P58872 404 aa16.84■□□□□ 0.29
CDX2-202ENST00000548877 SH3D19Q5HYK7 790 aa16.84■□□□□ 0.29
CDX2-202ENST00000548877 MAP3K21Q5TCX8 1036 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms