RNA–Protein interactions for RNA: ENST00000548573.5

SMARCD1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5 BASIC

Gene SMARCD1, Length 2,095 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-205ENST00000548573 DACH1Q9UI36 760 aa11.35□□□□□ -0.59
SMARCD1-205ENST00000548573 PPP2R2CQ9Y2T4 447 aa11.35□□□□□ -0.59
SMARCD1-205ENST00000548573 AKAP11Q9UKA4 1901 aa11.35□□□□□ -0.59
SMARCD1-205ENST00000548573 TMEM232C9JQI7 657 aa11.34□□□□□ -0.59
SMARCD1-205ENST00000548573 FANCGO15287 622 aa11.34□□□□□ -0.59
SMARCD1-205ENST00000548573 LIFRP42702 1097 aa11.34□□□□□ -0.59
SMARCD1-205ENST00000548573 SLC9C2Q5TAH2 1124 aa11.34□□□□□ -0.59
SMARCD1-205ENST00000548573 NT5DC1Q5TFE4 455 aa11.34□□□□□ -0.59
SMARCD1-205ENST00000548573 PI16Q6UXB8 463 aa11.34□□□□□ -0.59
SMARCD1-205ENST00000548573 ZBTB38Q8NAP3 1195 aaPredicted RBP11.34□□□□□ -0.59
SMARCD1-205ENST00000548573 CABLES1Q8TDN4 633 aa11.34□□□□□ -0.59
SMARCD1-205ENST00000548573 PHKBQ93100 1093 aa11.34□□□□□ -0.59
SMARCD1-205ENST00000548573 BAG1Q99933 345 aaPredicted RBP11.34□□□□□ -0.59
SMARCD1-205ENST00000548573 INTS13Q9NVM9 706 aa11.34□□□□□ -0.59
SMARCD1-205ENST00000548573 DENND2AQ9ULE3 1009 aa11.34□□□□□ -0.59
SMARCD1-205ENST00000548573 RIPOR2Q9Y4F9 1068 aa11.34□□□□□ -0.59
SMARCD1-205ENST00000548573 UBN2Q6ZU65 1347 aa11.34□□□□□ -0.59
SMARCD1-205ENST00000548573 NID2Q14112 1375 aa11.34□□□□□ -0.59
SMARCD1-205ENST00000548573 GOLGA8AA7E2F4 631 aa11.34□□□□□ -0.59
SMARCD1-205ENST00000548573 B4E1Z4 1266 aa11.34□□□□□ -0.59
SMARCD1-205ENST00000548573 PLA2G4AP47712 749 aa11.34□□□□□ -0.59
SMARCD1-205ENST00000548573 ALX1Q15699 326 aa11.34□□□□□ -0.59
SMARCD1-205ENST00000548573 METTL24Q5JXM2 366 aa11.34□□□□□ -0.59
SMARCD1-205ENST00000548573 MICU3Q86XE3 530 aa11.34□□□□□ -0.59
SMARCD1-205ENST00000548573 TRIML1Q8N9V2 468 aa11.34□□□□□ -0.59
SMARCD1-205ENST00000548573 MLKLQ8NB16 471 aa11.34□□□□□ -0.59
SMARCD1-205ENST00000548573 ENOX1Q8TC92 643 aaKnown RBP11.34□□□□□ -0.59
SMARCD1-205ENST00000548573 WASF1Q92558 559 aa11.34□□□□□ -0.59
SMARCD1-205ENST00000548573 CARD6Q9BX69 1037 aa11.34□□□□□ -0.59
SMARCD1-205ENST00000548573 LY9Q9HBG7 655 aa11.34□□□□□ -0.59
SMARCD1-205ENST00000548573 ST7Q9NRC1 585 aa11.34□□□□□ -0.59
SMARCD1-205ENST00000548573 FAM217BQ9NTX9 383 aaPredicted RBP11.34□□□□□ -0.59
SMARCD1-205ENST00000548573 DCCP43146 1447 aa11.34□□□□□ -0.59
SMARCD1-205ENST00000548573 CDHR2Q9BYE9 1310 aa11.33□□□□□ -0.59
SMARCD1-205ENST00000548573 RANBP6O60518 1105 aaKnown RBP11.33□□□□□ -0.6
SMARCD1-205ENST00000548573 FMNL1O95466 1100 aaPredicted RBP11.33□□□□□ -0.6
SMARCD1-205ENST00000548573 ZNF18P17022 549 aa11.33□□□□□ -0.6
SMARCD1-205ENST00000548573 ATF3P18847 181 aa11.33□□□□□ -0.6
SMARCD1-205ENST00000548573 RXRAP19793 462 aa11.33□□□□□ -0.6
SMARCD1-205ENST00000548573 BMP6P22004 513 aa11.33□□□□□ -0.6
SMARCD1-205ENST00000548573 MAP3K9P80192 1104 aa11.33□□□□□ -0.6
SMARCD1-205ENST00000548573 PDE4BQ07343 736 aa11.33□□□□□ -0.6
SMARCD1-205ENST00000548573 SSRP1Q08945 709 aaKnown RBP11.33□□□□□ -0.6
SMARCD1-205ENST00000548573 SPECC1LQ69YQ0 1117 aa11.33□□□□□ -0.6
SMARCD1-205ENST00000548573 NOSTRINQ8IVI9 506 aa11.33□□□□□ -0.6
SMARCD1-205ENST00000548573 NKX2-3Q8TAU0 364 aa11.33□□□□□ -0.6
SMARCD1-205ENST00000548573 MAN1B1Q9UKM7 699 aa11.33□□□□□ -0.6
SMARCD1-205ENST00000548573 LRP6O75581 1613 aa11.33□□□□□ -0.6
SMARCD1-205ENST00000548573 APPP05067 770 aa11.32□□□□□ -0.6
SMARCD1-205ENST00000548573 PTPREP23469 700 aa11.32□□□□□ -0.6
SMARCD1-205ENST00000548573 CASQ1P31415 396 aa11.32□□□□□ -0.6
SMARCD1-205ENST00000548573 CYP2C19P33261 490 aa11.32□□□□□ -0.6
SMARCD1-205ENST00000548573 SARSP49591 514 aaKnown RBP11.32□□□□□ -0.6
SMARCD1-205ENST00000548573 POSTNQ15063 836 aa11.32□□□□□ -0.6
SMARCD1-205ENST00000548573 NFXL1Q6ZNB6 911 aa11.32□□□□□ -0.6
SMARCD1-205ENST00000548573 GPR161Q8N6U8 529 aaKnown RBP11.32□□□□□ -0.6
SMARCD1-205ENST00000548573 TC2NQ8N9U0 490 aa11.32□□□□□ -0.6
SMARCD1-205ENST00000548573 ZNF579Q8NAF0 562 aaKnown RBP11.32□□□□□ -0.6
SMARCD1-205ENST00000548573 SENP2Q9HC62 589 aa11.32□□□□□ -0.6
SMARCD1-205ENST00000548573 MMP1P03956 469 aa11.32□□□□□ -0.6
SMARCD1-205ENST00000548573 IFNAR1P17181 557 aa11.32□□□□□ -0.6
SMARCD1-205ENST00000548573 SAFBQ15424 915 aaKnown RBP eCLIP11.32□□□□□ -0.6
SMARCD1-205ENST00000548573 TMEM67Q5HYA8 995 aa11.32□□□□□ -0.6
SMARCD1-205ENST00000548573 KANK3Q6NY19 840 aa11.32□□□□□ -0.6
SMARCD1-205ENST00000548573 LDHAL6AQ6ZMR3 332 aa11.32□□□□□ -0.6
SMARCD1-205ENST00000548573 KIF6Q6ZMV9 814 aa11.32□□□□□ -0.6
SMARCD1-205ENST00000548573 STK11IPQ8N1F8 1099 aa11.32□□□□□ -0.6
SMARCD1-205ENST00000548573 DDX17Q92841 729 aaKnown RBP11.32□□□□□ -0.6
SMARCD1-205ENST00000548573 FAM89AQ96GI7 184 aa11.32□□□□□ -0.6
SMARCD1-205ENST00000548573 PIH1D3Q9NQM4 214 aaKnown RBP11.32□□□□□ -0.6
SMARCD1-205ENST00000548573 FBXO2Q9UK22 296 aaPredicted RBP11.32□□□□□ -0.6
SMARCD1-205ENST00000548573 TBC1D2BQ9UPU7 963 aa11.32□□□□□ -0.6
SMARCD1-205ENST00000548573 MRFAP1Q9Y605 127 aa11.32□□□□□ -0.6
SMARCD1-205ENST00000548573 SLC12A7Q9Y666 1083 aa11.32□□□□□ -0.6
SMARCD1-205ENST00000548573 WDR17Q8IZU2 1322 aa11.32□□□□□ -0.6
SMARCD1-205ENST00000548573 ZNF532Q9HCE3 1301 aa11.32□□□□□ -0.6
SMARCD1-205ENST00000548573 TCRBV5S4A2TA0A5A2 114 aa11.31□□□□□ -0.6
SMARCD1-205ENST00000548573 ARID4AP29374 1257 aaPredicted RBP11.31□□□□□ -0.6
SMARCD1-205ENST00000548573 GNG11P61952 73 aa11.31□□□□□ -0.6
SMARCD1-205ENST00000548573 GOLGA8FQ08AF8 430 aa11.31□□□□□ -0.6
SMARCD1-205ENST00000548573 GOLGA8DPQ0D2H9 430 aa11.31□□□□□ -0.6
SMARCD1-205ENST00000548573 MORC3Q14149 939 aa11.31□□□□□ -0.6
SMARCD1-205ENST00000548573 RILPL1Q5EBL4 403 aa11.31□□□□□ -0.6
SMARCD1-205ENST00000548573 CT47A1Q5JQC4 288 aaPredicted RBP11.31□□□□□ -0.6
SMARCD1-205ENST00000548573 TEX35Q5T0J7 233 aa11.31□□□□□ -0.6
SMARCD1-205ENST00000548573 NUTM2AQ8IVF1 878 aaPredicted RBP11.31□□□□□ -0.6
SMARCD1-205ENST00000548573 VGLL2Q8N8G2 317 aa11.31□□□□□ -0.6
SMARCD1-205ENST00000548573 CCDC85AQ96PX6 553 aaPredicted RBP11.31□□□□□ -0.6
SMARCD1-205ENST00000548573 STRBPQ96SI9 672 aaKnown RBP11.31□□□□□ -0.6
SMARCD1-205ENST00000548573 SLC26A6Q9BXS9 759 aa11.31□□□□□ -0.6
SMARCD1-205ENST00000548573 UBXN6Q9BZV1 441 aa11.31□□□□□ -0.6
SMARCD1-205ENST00000548573 FOXP1Q9H334 677 aaPredicted RBP11.31□□□□□ -0.6
SMARCD1-205ENST00000548573 CNNM2Q9H8M5 875 aa11.31□□□□□ -0.6
SMARCD1-205ENST00000548573 CALCOCO1Q9P1Z2 691 aa11.31□□□□□ -0.6
SMARCD1-205ENST00000548573 NFE2L3Q9Y4A8 694 aa11.31□□□□□ -0.6
SMARCD1-205ENST00000548573 SPATA31A3Q5VYP0 1347 aa11.31□□□□□ -0.6
SMARCD1-205ENST00000548573 PATL2C9JE40 543 aaKnown RBP11.31□□□□□ -0.6
SMARCD1-205ENST00000548573 FOXN1O15353 648 aa11.31□□□□□ -0.6
SMARCD1-205ENST00000548573 IDH1O75874 414 aaKnown RBP11.31□□□□□ -0.6
SMARCD1-205ENST00000548573 UQCRFS1P1P0C7P4 283 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms