RNA–Protein interactions for RNA: ENST00000548229.2

SVOP-202, Transcript of SV2 related protein, humanhuman

TSL 2

Gene SVOP, Length 597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVOP-202ENST00000548229 SLC5A1P13866 664 aa19.83■□□□□ 0.77
SVOP-202ENST00000548229 LPIN2Q92539 896 aa19.83■□□□□ 0.77
SVOP-202ENST00000548229 PAWRQ96IZ0 340 aaKnown RBP19.83■□□□□ 0.77
SVOP-202ENST00000548229 FGFR2P21802 821 aa19.82■□□□□ 0.76
SVOP-202ENST00000548229 NFIAQ12857 509 aa19.82■□□□□ 0.76
SVOP-202ENST00000548229 GADL1Q6ZQY3 521 aa19.82■□□□□ 0.76
SVOP-202ENST00000548229 GDF15Q99988 308 aa19.82■□□□□ 0.76
SVOP-202ENST00000548229 USP40Q9NVE5 1235 aa19.82■□□□□ 0.76
SVOP-202ENST00000548229 GNL3LQ9NVN8 582 aaKnown RBP19.82■□□□□ 0.76
SVOP-202ENST00000548229 FAM198AQ9UFP1 575 aa19.82■□□□□ 0.76
SVOP-202ENST00000548229 AFG3L2Q9Y4W6 797 aa19.82■□□□□ 0.76
SVOP-202ENST00000548229 PHF20L1A8MW92 1017 aa19.81■□□□□ 0.76
SVOP-202ENST00000548229 ENTPD3O75355 529 aa19.81■□□□□ 0.76
SVOP-202ENST00000548229 LDHBP07195 334 aaKnown RBP19.81■□□□□ 0.76
SVOP-202ENST00000548229 PTPRAP18433 802 aa19.81■□□□□ 0.76
SVOP-202ENST00000548229 DEFB123Q8N688 67 aa19.81■□□□□ 0.76
SVOP-202ENST00000548229 LRRFIP2Q9Y608 721 aaKnown RBP19.81■□□□□ 0.76
SVOP-202ENST00000548229 DIXDC1Q155Q3 683 aa19.8■□□□□ 0.76
SVOP-202ENST00000548229 PNMA3Q9UL41 463 aa19.8■□□□□ 0.76
SVOP-202ENST00000548229 TAOK2Q9UL54 1235 aa19.8■□□□□ 0.76
SVOP-202ENST00000548229 STXBP5LQ9Y2K9 1186 aa19.8■□□□□ 0.76
SVOP-202ENST00000548229 CTNND1O60716 968 aaKnown RBP19.79■□□□□ 0.76
SVOP-202ENST00000548229 LRIT3Q3SXY7 679 aa19.79■□□□□ 0.76
SVOP-202ENST00000548229 ANKRD44Q8N8A2 993 aa19.79■□□□□ 0.76
SVOP-202ENST00000548229 IDI2Q9BXS1 227 aa19.79■□□□□ 0.76
SVOP-202ENST00000548229 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.79■□□□□ 0.76
SVOP-202ENST00000548229 MAP3K10Q02779 954 aa19.78■□□□□ 0.76
SVOP-202ENST00000548229 FAM110CQ1W6H9 321 aa19.78■□□□□ 0.76
SVOP-202ENST00000548229 ZGPATQ8N5A5 531 aaKnown RBP19.78■□□□□ 0.76
SVOP-202ENST00000548229 NBPF3Q9H094 633 aa19.78■□□□□ 0.76
SVOP-202ENST00000548229 AGTPBP1Q9UPW5 1226 aa19.78■□□□□ 0.76
SVOP-202ENST00000548229 SALL1Q9NSC2 1324 aa19.77■□□□□ 0.76
SVOP-202ENST00000548229 EYA2O00167 538 aa19.77■□□□□ 0.76
SVOP-202ENST00000548229 HMGCRP04035 888 aa19.77■□□□□ 0.76
SVOP-202ENST00000548229 PRDX5P30044 214 aa19.77■□□□□ 0.76
SVOP-202ENST00000548229 ZSCAN29Q8IWY8 852 aaPredicted RBP19.77■□□□□ 0.76
SVOP-202ENST00000548229 SLF2Q8IX21 1173 aa19.77■□□□□ 0.76
SVOP-202ENST00000548229 C7orf61Q8IZ16 206 aa19.77■□□□□ 0.76
SVOP-202ENST00000548229 RPTORQ8N122 1335 aa19.76■□□□□ 0.75
SVOP-202ENST00000548229 ATRNL1Q5VV63 1379 aa19.76■□□□□ 0.75
SVOP-202ENST00000548229 SEMA3EO15041 775 aa19.76■□□□□ 0.75
SVOP-202ENST00000548229 GCLCP48506 637 aaPredicted RBP19.76■□□□□ 0.75
SVOP-202ENST00000548229 RGS3P49796 1198 aa19.76■□□□□ 0.75
SVOP-202ENST00000548229 TDHQ8IZJ6 230 aa19.76■□□□□ 0.75
SVOP-202ENST00000548229 ANKRD13CQ8N6S4 541 aa19.76■□□□□ 0.75
SVOP-202ENST00000548229 KLHDC4Q8TBB5 520 aa19.76■□□□□ 0.75
SVOP-202ENST00000548229 HMX1Q9NP08 348 aaPredicted RBP19.76■□□□□ 0.75
SVOP-202ENST00000548229 DENND2AQ9ULE3 1009 aa19.76■□□□□ 0.75
SVOP-202ENST00000548229 SALL2Q9Y467 1007 aaPredicted RBP19.76■□□□□ 0.75
SVOP-202ENST00000548229 TRIM75PA6NK02 468 aa19.75■□□□□ 0.75
SVOP-202ENST00000548229 PABPC4Q13310 644 aaKnown RBP eCLIP19.75■□□□□ 0.75
SVOP-202ENST00000548229 ZFPM1Q8IX07 1006 aa19.75■□□□□ 0.75
SVOP-202ENST00000548229 PROCA1Q8NCQ7 364 aaPredicted RBP19.75■□□□□ 0.75
SVOP-202ENST00000548229 FBXO3Q9UK99 471 aa19.75■□□□□ 0.75
SVOP-202ENST00000548229 DIS3LQ8TF46 1054 aaKnown RBP19.74■□□□□ 0.75
SVOP-202ENST00000548229 TBC1D2Q9BYX2 928 aa19.74■□□□□ 0.75
SVOP-202ENST00000548229 ZMYND8Q9ULU4 1186 aaPredicted RBP19.74■□□□□ 0.75
SVOP-202ENST00000548229 LAMA2P24043 3122 aaKnown RBP19.74■□□□□ 0.75
SVOP-202ENST00000548229 MYH13Q9UKX3 1938 aa19.74■□□□□ 0.75
SVOP-202ENST00000548229 ZBTB22O15209 634 aa19.73■□□□□ 0.75
SVOP-202ENST00000548229 CCDC184Q52MB2 194 aa19.73■□□□□ 0.75
SVOP-202ENST00000548229 C11orf49Q9H6J7 331 aa19.73■□□□□ 0.75
SVOP-202ENST00000548229 SPINK5Q9NQ38 1064 aaPredicted RBP19.73■□□□□ 0.75
SVOP-202ENST00000548229 MTMR10Q9NXD2 777 aa19.73■□□□□ 0.75
SVOP-202ENST00000548229 PTPRCP08575 1304 aa19.73■□□□□ 0.75
SVOP-202ENST00000548229 TBC1D12O60347 775 aa19.72■□□□□ 0.75
SVOP-202ENST00000548229 CEP126Q9P2H0 1117 aa19.72■□□□□ 0.75
SVOP-202ENST00000548229 GAKO14976 1311 aa19.72■□□□□ 0.75
SVOP-202ENST00000548229 DOCK3Q8IZD9 2030 aa19.71■□□□□ 0.75
SVOP-202ENST00000548229 MAGEA10P43363 369 aaPredicted RBP19.71■□□□□ 0.75
SVOP-202ENST00000548229 ATP2B3Q16720 1220 aa19.71■□□□□ 0.75
SVOP-202ENST00000548229 FAM163AQ96GL9 167 aaPredicted RBP19.71■□□□□ 0.75
SVOP-202ENST00000548229 UBE2OQ9C0C9 1292 aaKnown RBP19.71■□□□□ 0.75
SVOP-202ENST00000548229 OGDHLQ9ULD0 1010 aa19.71■□□□□ 0.75
SVOP-202ENST00000548229 DOCK2Q92608 1830 aa19.71■□□□□ 0.75
SVOP-202ENST00000548229 CIAO1O76071 339 aa19.7■□□□□ 0.74
SVOP-202ENST00000548229 SPTY2D1Q68D10 685 aaPredicted RBP19.7■□□□□ 0.74
SVOP-202ENST00000548229 Q7L0L9 218 aa19.7■□□□□ 0.74
SVOP-202ENST00000548229 SH3BP5LQ7L8J4 393 aa19.7■□□□□ 0.74
SVOP-202ENST00000548229 DZIP1Q86YF9 867 aaKnown RBP19.7■□□□□ 0.74
SVOP-202ENST00000548229 USP44Q9H0E7 712 aa19.7■□□□□ 0.74
SVOP-202ENST00000548229 GJD2Q9UKL4 321 aa19.7■□□□□ 0.74
SVOP-202ENST00000548229 ALPK3Q96L96 1907 aa19.7■□□□□ 0.74
SVOP-202ENST00000548229 PTPRFP10586 1907 aa19.69■□□□□ 0.74
SVOP-202ENST00000548229 DDTLA6NHG4 134 aaPredicted RBP19.69■□□□□ 0.74
SVOP-202ENST00000548229 NPM3O75607 178 aaKnown RBP19.69■□□□□ 0.74
SVOP-202ENST00000548229 RFX5P48382 616 aaPredicted RBP19.69■□□□□ 0.74
SVOP-202ENST00000548229 TREML2Q5T2D2 321 aa19.69■□□□□ 0.74
SVOP-202ENST00000548229 OSBPL5Q9H0X9 879 aaPredicted RBP19.69■□□□□ 0.74
SVOP-202ENST00000548229 MRS2Q9HD23 443 aa19.69■□□□□ 0.74
SVOP-202ENST00000548229 VCANP13611 3396 aa19.69■□□□□ 0.74
SVOP-202ENST00000548229 MAP4K4O95819 1239 aaPredicted RBP19.68■□□□□ 0.74
SVOP-202ENST00000548229 SYN1P17600 705 aa19.68■□□□□ 0.74
SVOP-202ENST00000548229 ATG9AQ7Z3C6 839 aa19.68■□□□□ 0.74
SVOP-202ENST00000548229 TRMT44Q8IYL2 757 aaKnown RBP19.68■□□□□ 0.74
SVOP-202ENST00000548229 ZNF280CQ8ND82 737 aa19.68■□□□□ 0.74
SVOP-202ENST00000548229 DOCK1Q14185 1865 aa19.68■□□□□ 0.74
SVOP-202ENST00000548229 RFX7Q2KHR2 1363 aa19.68■□□□□ 0.74
SVOP-202ENST00000548229 DNAH12Q6ZR08 3092 aa19.67■□□□□ 0.74
SVOP-202ENST00000548229 SPP2Q13103 211 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms