RNA–Protein interactions for RNA: ENST00000548097.5

KRT4-201, Transcript of keratin 4, humanhuman

TSL 1 (best)

Gene KRT4, Length 1,839 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4-201ENST00000548097 CDAN1Q8IWY9 1227 aa20.5■□□□□ 0.87
KRT4-201ENST00000548097 MKRN1Q9UHC7 482 aaKnown RBP20.5■□□□□ 0.87
KRT4-201ENST00000548097 PALD1Q9ULE6 856 aa20.5■□□□□ 0.87
KRT4-201ENST00000548097 FOCADQ5VW36 1801 aa20.49■□□□□ 0.87
KRT4-201ENST00000548097 SLURP2P0DP57 97 aa20.49■□□□□ 0.87
KRT4-201ENST00000548097 MAP4K1Q92918 833 aa20.49■□□□□ 0.87
KRT4-201ENST00000548097 DSCC1Q9BVC3 393 aa20.49■□□□□ 0.87
KRT4-201ENST00000548097 MCM9Q9NXL9 1143 aa20.49■□□□□ 0.87
KRT4-201ENST00000548097 TMOD2Q9NZR1 351 aa20.49■□□□□ 0.87
KRT4-201ENST00000548097 RBM8AQ9Y5S9 174 aaKnown RBP20.49■□□□□ 0.87
KRT4-201ENST00000548097 NAV1Q8NEY1 1877 aa20.49■□□□□ 0.87
KRT4-201ENST00000548097 CNTNAP1P78357 1384 aa20.48■□□□□ 0.87
KRT4-201ENST00000548097 REC8O95072 547 aa20.48■□□□□ 0.87
KRT4-201ENST00000548097 VEGFAP15692 232 aaPredicted RBP20.48■□□□□ 0.87
KRT4-201ENST00000548097 HAND2P61296 217 aa20.48■□□□□ 0.87
KRT4-201ENST00000548097 USP50Q70EL3 339 aaPredicted RBP20.48■□□□□ 0.87
KRT4-201ENST00000548097 IDI2Q9BXS1 227 aa20.48■□□□□ 0.87
KRT4-201ENST00000548097 NAPBQ9H115 298 aa20.48■□□□□ 0.87
KRT4-201ENST00000548097 POLR2AP24928 1970 aaKnown RBP20.48■□□□□ 0.87
KRT4-201ENST00000548097 USP17L12C9JPN9 530 aa20.48■□□□□ 0.87
KRT4-201ENST00000548097 USP17L21D6R901 530 aa20.48■□□□□ 0.87
KRT4-201ENST00000548097 PRAMEF18Q5VWM3 479 aa20.48■□□□□ 0.87
KRT4-201ENST00000548097 CTR9Q6PD62 1173 aa20.48■□□□□ 0.87
KRT4-201ENST00000548097 CERS3Q8IU89 383 aa20.48■□□□□ 0.87
KRT4-201ENST00000548097 USP26Q9BXU7 913 aa20.48■□□□□ 0.87
KRT4-201ENST00000548097 TMEM39BQ9GZU3 492 aa20.48■□□□□ 0.87
KRT4-201ENST00000548097 OSBPL5Q9H0X9 879 aaPredicted RBP20.48■□□□□ 0.87
KRT4-201ENST00000548097 ATP8A2Q9NTI2 1148 aa20.48■□□□□ 0.87
KRT4-201ENST00000548097 MINDY4BA8MYZ0 360 aa20.47■□□□□ 0.87
KRT4-201ENST00000548097 SH3BP5LQ7L8J4 393 aa20.47■□□□□ 0.87
KRT4-201ENST00000548097 CLEC11AQ9Y240 323 aa20.47■□□□□ 0.87
KRT4-201ENST00000548097 TAF6LQ9Y6J9 622 aa20.47■□□□□ 0.87
KRT4-201ENST00000548097 DDTLA6NHG4 134 aaPredicted RBP20.46■□□□□ 0.87
KRT4-201ENST00000548097 NACAP1Q9BZK3 213 aa20.46■□□□□ 0.87
KRT4-201ENST00000548097 MYH1P12882 1939 aa20.46■□□□□ 0.87
KRT4-201ENST00000548097 PLCD1P51178 756 aa20.46■□□□□ 0.87
KRT4-201ENST00000548097 RASA3Q14644 834 aa20.46■□□□□ 0.87
KRT4-201ENST00000548097 ZSCAN29Q8IWY8 852 aaPredicted RBP20.46■□□□□ 0.87
KRT4-201ENST00000548097 ADM5C9JUS6 153 aa20.45■□□□□ 0.86
KRT4-201ENST00000548097 CTDSPL2Q05D32 466 aa20.45■□□□□ 0.86
KRT4-201ENST00000548097 DDRGK1Q96HY6 314 aa20.45■□□□□ 0.86
KRT4-201ENST00000548097 INCENPQ9NQS7 918 aa20.45■□□□□ 0.86
KRT4-201ENST00000548097 DDX60LQ5H9U9 1706 aaKnown RBP20.45■□□□□ 0.86
KRT4-201ENST00000548097 POLR3DP05423 398 aaPredicted RBP20.44■□□□□ 0.86
KRT4-201ENST00000548097 PNMA8AQ86V59 439 aaPredicted RBP20.44■□□□□ 0.86
KRT4-201ENST00000548097 DEFB129Q9H1M3 183 aa20.44■□□□□ 0.86
KRT4-201ENST00000548097 GPBP1L1Q9HC44 474 aaPredicted RBP20.44■□□□□ 0.86
KRT4-201ENST00000548097 U3KPZ7 1027 aaPredicted RBP20.44■□□□□ 0.86
KRT4-201ENST00000548097 CYP21A2P08686 494 aa20.43■□□□□ 0.86
KRT4-201ENST00000548097 YY1P25490 414 aa20.43■□□□□ 0.86
KRT4-201ENST00000548097 NECTIN1Q15223 517 aa20.43■□□□□ 0.86
KRT4-201ENST00000548097 ALX1Q15699 326 aa20.43■□□□□ 0.86
KRT4-201ENST00000548097 MAP1SQ66K74 1059 aaPredicted RBP20.43■□□□□ 0.86
KRT4-201ENST00000548097 FAM151AQ8WW52 585 aa20.43■□□□□ 0.86
KRT4-201ENST00000548097 DCPSQ96C86 337 aaKnown RBP20.43■□□□□ 0.86
KRT4-201ENST00000548097 DYNLL2Q96FJ2 89 aa20.43■□□□□ 0.86
KRT4-201ENST00000548097 FAM196BA6NMK8 535 aa20.43■□□□□ 0.86
KRT4-201ENST00000548097 ENTPD3O75355 529 aa20.43■□□□□ 0.86
KRT4-201ENST00000548097 GIMAP6Q6P9H5 292 aa20.43■□□□□ 0.86
KRT4-201ENST00000548097 NBPF3Q9H094 633 aa20.43■□□□□ 0.86
KRT4-201ENST00000548097 TACC3Q9Y6A5 838 aa20.43■□□□□ 0.86
KRT4-201ENST00000548097 RPAP1Q9BWH6 1393 aaPredicted RBP20.43■□□□□ 0.86
KRT4-201ENST00000548097 SLC27A2O14975 620 aa20.42■□□□□ 0.86
KRT4-201ENST00000548097 PPARAQ07869 468 aa20.42■□□□□ 0.86
KRT4-201ENST00000548097 CREB3L3Q68CJ9 461 aa20.42■□□□□ 0.86
KRT4-201ENST00000548097 RASEFQ8IZ41 740 aa20.42■□□□□ 0.86
KRT4-201ENST00000548097 GLIS2Q9BZE0 524 aaPredicted RBP20.42■□□□□ 0.86
KRT4-201ENST00000548097 ARPP21Q9UBL0 812 aaPredicted RBP20.42■□□□□ 0.86
KRT4-201ENST00000548097 TNNI2P48788 182 aa20.41■□□□□ 0.86
KRT4-201ENST00000548097 FMR1Q06787 632 aaKnown RBP eCLIP20.41■□□□□ 0.86
KRT4-201ENST00000548097 C12orf60Q5U649 245 aa20.41■□□□□ 0.86
KRT4-201ENST00000548097 FKBP1CQ5VVH2 108 aa20.41■□□□□ 0.86
KRT4-201ENST00000548097 USP48Q86UV5 1035 aa20.41■□□□□ 0.86
KRT4-201ENST00000548097 APOBEC3FQ8IUX4 373 aaKnown RBP20.41■□□□□ 0.86
KRT4-201ENST00000548097 ZNF213O14771 459 aa20.41■□□□□ 0.86
KRT4-201ENST00000548097 HSPA4P34932 840 aa20.41■□□□□ 0.86
KRT4-201ENST00000548097 TNFAIP1Q13829 316 aa20.41■□□□□ 0.86
KRT4-201ENST00000548097 KRT26Q7Z3Y9 468 aa20.41■□□□□ 0.86
KRT4-201ENST00000548097 FAM83AQ86UY5 434 aa20.41■□□□□ 0.86
KRT4-201ENST00000548097 TBC1D10CQ8IV04 446 aa20.41■□□□□ 0.86
KRT4-201ENST00000548097 SLC44A5Q8NCS7 719 aa20.41■□□□□ 0.86
KRT4-201ENST00000548097 TEPSINQ96N21 525 aa20.41■□□□□ 0.86
KRT4-201ENST00000548097 CSRNP1Q96S65 589 aa20.41■□□□□ 0.86
KRT4-201ENST00000548097 PGAP2Q9UHJ9 254 aa20.41■□□□□ 0.86
KRT4-201ENST00000548097 FZD1Q9UP38 647 aa20.41■□□□□ 0.86
KRT4-201ENST00000548097 SIPA1L1O43166 1804 aa20.4■□□□□ 0.86
KRT4-201ENST00000548097 COL9A3Q14050 684 aaPredicted RBP20.4■□□□□ 0.86
KRT4-201ENST00000548097 IMMTQ16891 758 aaKnown RBP20.4■□□□□ 0.86
KRT4-201ENST00000548097 NBPF12Q5TAG4 269 aaPredicted RBP20.4■□□□□ 0.86
KRT4-201ENST00000548097 SULF1Q8IWU6 871 aa20.4■□□□□ 0.86
KRT4-201ENST00000548097 NKX2-3Q8TAU0 364 aa20.4■□□□□ 0.86
KRT4-201ENST00000548097 ZC3H15Q8WU90 426 aaKnown RBP20.4■□□□□ 0.86
KRT4-201ENST00000548097 CTNNA3Q9UI47 895 aa20.4■□□□□ 0.86
KRT4-201ENST00000548097 LAMB1P07942 1786 aa20.4■□□□□ 0.86
KRT4-201ENST00000548097 ZMYM6O95789 1325 aa20.4■□□□□ 0.86
KRT4-201ENST00000548097 NPM3O75607 178 aaKnown RBP20.39■□□□□ 0.86
KRT4-201ENST00000548097 SBK1Q52WX2 424 aa20.39■□□□□ 0.86
KRT4-201ENST00000548097 MIGA2Q7L4E1 593 aa20.39■□□□□ 0.86
KRT4-201ENST00000548097 C22orf23Q9BZE7 217 aa20.39■□□□□ 0.86
KRT4-201ENST00000548097 PITPNM2Q9BZ72 1349 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms